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MK256393.1__QBA85109.1__X__00001
Bact-VirMK256393.1__QBA85109.1__X__00001
Identity
- Accession:
- MK256393 ↗
- Kingdom:
- phage
Quality
71.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-125
Domain cluster:
rep: OQ326496.2__WDQ45528.1__X__00060__D262-367
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5c4iB02 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 30.0 | 3.97e-01 | 77.6% | 95.1% |
| 3qnmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 37.0 | 4.23e-01 | 92.0% | 92.2% |
| 1ci4A00 | 1.10.150.40 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Barrier-to-autointegration factor, BAF | 0.55 | 38.0 | 4.33e-01 | 78.4% | 100.0% |
| 1kgqA01 | 1.10.166.10 | Mainly Alpha › Orthogonal Bundle › Tetrahydrodipicolinate-N-succinyltransferase; Chain A, domain 1 › Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain | 0.53 | 26.0 | 3.20e-01 | 96.0% | 74.3% |
| 1jb0A00 | 1.20.1130.10 | Mainly Alpha › Up-down Bundle › Photosystem I p700 chlorophyll A apoprotein A1 › Photosystem I PsaA/PsaB | 0.52 | 39.0 | 2.44e-01 | 78.4% | 43.1% |
| 1zylA03 | 1.20.1270.170 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.52 | 27.0 | 2.99e-01 | 84.8% | 59.2% |
| 3s6iD01 | 1.10.1670.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › | 0.51 | 34.0 | 4.00e-01 | 72.0% | 95.6% |
| 7z0sF01 | 3.30.70.3270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 34.0 | 3.17e-01 | 80.8% | 52.8% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030882 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.82 | 73.0 | 6.05e-01 | 97.6% | 56.2% |
| 3199759 | 101.1.1.20 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CPSF_A | 0.61 | 44.0 | 4.92e-01 | 85.6% | 100.0% |
| 3168643 | 592.1.1.2 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › Helicase_PWI | 0.57 | 38.0 | 4.19e-01 | 78.4% | 87.4% |
| 5027310 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.57 | 27.0 | 3.05e-01 | 97.6% | 57.9% |
| 3803807 | 3455.1.1.9 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors › DUF659 | 0.56 | 41.0 | 3.81e-01 | 88.0% | 58.2% |
| 3711938 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.55 | 36.0 | 4.18e-01 | 87.2% | 97.6% |
| 4096952 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.55 | 37.0 | 3.90e-01 | 78.4% | 74.8% |
| 3676050 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.54 | 47.0 | 3.54e-01 | 100.0% | 49.3% |
| 3683510 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 48.0 | 3.77e-01 | 100.0% | 60.0% |
| 3236891 | 592.1.1.6 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › Nab2 | 0.53 | 35.0 | 3.47e-01 | 82.4% | 62.3% |
| 3387406 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.53 | 36.0 | 3.90e-01 | 78.4% | 82.9% |
| 3591729 | 5051.1.1.6 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans | 0.53 | 43.0 | 3.00e-01 | 88.8% | 82.5% |
| 3735148 | 5051.1.1.6 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans | 0.53 | 43.0 | 3.02e-01 | 89.6% | 85.3% |
| 3920145 | 148.1.3.11 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MT | 0.51 | 46.0 | 3.18e-01 | 100.0% | 34.4% |
| 3326268 | 103.1.1.128 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › Sin3a_C | 0.51 | 43.0 | 3.44e-01 | 94.4% | 86.5% |
| 3651998 | 509.1.1.5 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › Sin3a_C | 0.50 | 42.0 | 3.75e-01 | 93.6% | 96.8% |
| 3651732 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.50 | 44.0 | 3.52e-01 | 100.0% | 49.6% |
D2
high
residues 151-241