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MK257744.1__AZU97738.1__PGDDIFCJ_00109__00108

Bact-Vir

MK257744.1__AZU97738.1__PGDDIFCJ_00109__00108

Identity

Accession:
MK257744 ↗
Kingdom:
phage

Quality

65.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 385-559
PDB
Domain cluster: representative
CATH (66)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1atzB00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.82 63.0 6.14e-01 78.9% 93.1%
4f1jA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.81 63.0 5.99e-01 79.4% 94.5%
1bho100 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.81 60.0 5.90e-01 76.0% 93.1%
6snkA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.80 60.0 5.94e-01 76.6% 93.5%
4kq9A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.74 42.0 5.55e-01 86.9% 100.0%
3ibsA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.73 63.0 5.95e-01 90.9% 93.2%
2vk2A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.72 46.0 5.25e-01 76.6% 84.7%
4y9tA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.72 45.0 4.90e-01 77.1% 74.5%
1lfaA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.72 62.0 6.18e-01 90.9% 93.4%
1shuX00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.71 64.0 6.33e-01 93.7% 92.8%
3gxbA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.71 62.0 6.19e-01 90.9% 94.4%
1gcaA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.71 47.0 5.11e-01 77.1% 79.7%
4ywhA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 45.0 4.92e-01 92.0% 77.9%
1aoxA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.70 62.0 5.87e-01 93.1% 92.5%
2xggB00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.69 53.0 5.81e-01 79.4% 100.0%
3qq5A02 3.40.50.11420 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.69 39.0 4.84e-01 98.9% 88.1%
3hs3A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 42.0 4.88e-01 92.6% 84.1%
1q0pA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.69 60.0 5.85e-01 92.0% 99.5%
2i6qA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.68 63.0 5.80e-01 97.7% 94.1%
7xlqD02 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.67 62.0 6.01e-01 96.6% 92.6%
4xxhA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 43.0 4.76e-01 76.6% 81.9%
3u80A00 3.40.50.9100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dehydroquinase, class II 0.65 43.0 4.92e-01 76.6% 91.3%
7bmfA01 3.90.1640.30 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › 0.64 47.0 4.68e-01 100.0% 71.9%
1bgvA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 53.0 5.49e-01 100.0% 94.0%
3quaA00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 47.0 4.72e-01 77.1% 95.5%
5gudA03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 52.0 5.38e-01 100.0% 93.9%
1h9cA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 34.0 4.19e-01 76.6% 85.8%
3hbmA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.62 43.0 4.77e-01 92.0% 87.9%
1t35E00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 45.0 4.52e-01 76.0% 92.9%
5ix8A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 47.0 4.93e-01 79.4% 95.0%
4rk6A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 42.0 4.92e-01 75.4% 98.4%
3t54A01 3.40.50.11950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 34.0 4.06e-01 76.6% 81.0%
2iz6A00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 49.0 5.15e-01 90.9% 93.1%
2gt1A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.60 44.0 4.57e-01 75.4% 89.6%
4p98A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 44.0 4.87e-01 76.6% 96.5%
1a9xA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 39.0 4.74e-01 82.3% 100.0%
3q3eA03 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.59 47.0 4.63e-01 93.1% 76.4%
1kjqA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 39.0 4.57e-01 85.7% 95.9%
3dv9A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.58 49.0 5.00e-01 100.0% 91.2%
3e5nA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 40.0 4.75e-01 74.9% 100.0%
4eekA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.58 47.0 4.85e-01 93.7% 91.4%
5cvcA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 31.0 3.95e-01 84.6% 92.8%
3mgkB00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.56 42.0 4.04e-01 77.1% 80.1%
5d84A02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 32.0 3.98e-01 84.6% 89.2%
4d9gA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 36.0 4.24e-01 94.9% 94.1%
2d13A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 36.0 4.36e-01 90.3% 100.0%
5djsA02 3.40.50.11380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 47.0 4.60e-01 95.4% 83.5%
3jyoA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.55 37.0 4.08e-01 77.1% 83.5%
2h3hA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 40.0 4.33e-01 75.4% 100.0%
1gsaA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 37.0 4.24e-01 76.6% 93.0%
5swvC02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.54 36.0 3.98e-01 76.6% 83.8%
3r0xA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 36.0 4.15e-01 74.9% 93.5%
4xijA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.54 36.0 4.11e-01 77.1% 89.9%
5i7wA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 32.0 3.88e-01 84.6% 89.5%
2cdqA01 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.54 38.0 3.68e-01 72.0% 99.0%
3re1A02 3.40.50.10090 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 36.0 4.07e-01 87.4% 89.8%
6yv8A01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.54 38.0 3.51e-01 70.3% 97.7%
4maaA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 45.0 4.34e-01 89.7% 77.8%
2ap9B00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.54 43.0 3.67e-01 85.1% 97.9%
4impA02 3.40.50.11460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 49.0 4.58e-01 98.9% 86.7%
4k2hD00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.52 45.0 4.44e-01 90.9% 86.0%
3sl1A00 3.40.800.10 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain 0.52 46.0 3.85e-01 96.0% 97.7%
4c76A00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.52 44.0 4.41e-01 90.9% 92.3%
1ydgA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.52 44.0 4.25e-01 90.9% 90.0%
4rsmD01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 38.0 3.91e-01 76.6% 96.3%
3p26A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 43.0 3.97e-01 90.9% 83.8%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5058813 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.86 64.0 5.96e-01 76.6% 94.4%
4223324 2006.1.6.15 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 0.85 63.0 6.55e-01 75.4% 93.8%
5059310 2006.1.6.15 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 0.83 64.0 6.04e-01 80.6% 91.9%
3903207 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.82 64.0 4.63e-01 80.6% 43.1%
3406245 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.82 61.0 5.47e-01 76.0% 95.2%
5024101 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.81 65.0 6.19e-01 82.9% 92.6%
3557596 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.81 60.0 5.65e-01 76.0% 96.7%
5018603 2006.1.6.15 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 0.81 65.0 5.87e-01 82.9% 95.2%
4991152 2006.1.6.24 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF2201 0.81 66.0 7.18e-01 97.1% 98.7%
4970681 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.81 64.0 6.03e-01 81.7% 83.9%
5048017 2006.1.6.21 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE 0.81 64.0 5.50e-01 82.3% 82.6%
4009542 2006.1.6.21 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE 0.80 63.0 5.27e-01 80.6% 58.6%
4997796 2006.1.6.45 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 0.80 63.0 5.21e-01 81.1% 66.1%
5076409 2006.1.6.21 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE 0.80 66.0 6.37e-01 85.7% 92.8%
4952940 2006.1.6.21 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE 0.80 63.0 5.51e-01 81.1% 85.3%
3248188 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.79 62.0 5.88e-01 80.0% 86.5%
4985336 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.79 56.0 6.02e-01 72.0% 97.3%
5050813 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.77 60.0 5.42e-01 81.1% 74.7%
5057179 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.76 57.0 6.07e-01 76.6% 100.0%
4937621 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.76 53.0 6.19e-01 84.0% 98.4%
3972521 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.75 65.0 6.02e-01 90.3% 89.3%
4264308 2006.1.6.24 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF2201 0.74 67.0 6.96e-01 97.7% 99.4%
3249752 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.74 63.0 5.66e-01 88.6% 75.7%
5069853 2006.1.6.15 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 0.74 69.0 6.27e-01 98.9% 95.1%
4937442 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.73 63.0 6.43e-01 90.3% 93.5%
3289694 2006.1.6.21 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE 0.73 63.0 6.47e-01 91.4% 95.2%
4959354 2006.1.6.24 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF2201 0.72 67.0 6.80e-01 98.3% 98.8%
4998535 2006.1.6.45 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 0.72 65.0 6.03e-01 93.7% 93.8%
3959674 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.72 64.0 6.16e-01 93.7% 99.0%
3724649 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.71 68.0 5.61e-01 100.0% 69.0%
4937644 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.71 62.0 6.14e-01 91.4% 93.5%
5083686 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.71 66.0 6.30e-01 97.7% 93.0%
5080058 2006.1.6.15 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 0.71 67.0 5.96e-01 98.9% 96.2%
5052354 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.71 62.0 5.80e-01 91.4% 84.8%
5041959 2006.1.6.24 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF2201 0.71 68.0 6.78e-01 100.0% 98.3%
5039945 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.71 61.0 5.93e-01 90.9% 86.7%
5061674 2006.1.6.15 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 0.71 66.0 6.09e-01 98.9% 95.5%
4985335 2006.1.6.15 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 0.71 66.0 5.93e-01 98.9% 91.9%
3218086 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.71 61.0 5.99e-01 90.9% 88.9%
3620957 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.71 63.0 6.10e-01 92.6% 88.4%
5071088 2006.1.6.21 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE 0.71 61.0 5.44e-01 90.3% 91.1%
3630637 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.70 60.0 5.66e-01 90.9% 91.4%
5072653 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.69 65.0 6.26e-01 98.9% 94.9%
3290695 2006.1.6.24 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF2201 0.69 65.0 6.26e-01 98.3% 97.4%
3260278 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.69 60.0 5.56e-01 92.0% 85.0%
3254227 2006.1.6.13 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 0.69 61.0 6.17e-01 93.1% 96.0%
5023800 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.69 61.0 5.99e-01 93.1% 93.0%
4968153 2006.1.6.15 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 0.69 65.0 6.28e-01 98.9% 95.3%
5012913 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.68 64.0 6.06e-01 98.9% 89.2%
3290499 2006.1.6.21 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE 0.67 62.0 5.14e-01 98.9% 71.7%
3395332 2006.1.1.36 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Put_Phosphatase 0.67 50.0 4.46e-01 77.1% 95.4%
3392846 7512.1.1.1 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT 0.67 50.0 4.26e-01 76.6% 93.7%
None 0.66 49.0 4.36e-01 76.6% 92.0%
5029129 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.66 49.0 4.86e-01 76.0% 90.8%
3393280 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.63 58.0 5.83e-01 98.9% 97.1%
4146763 7512.1.1.1 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT 0.62 47.0 4.34e-01 77.1% 66.0%
3273995 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.61 54.0 4.70e-01 93.7% 88.1%
4136924 7531.1.1.1 a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase 0.59 46.0 3.94e-01 81.1% 97.2%
4445788 2003.1.5.89 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Anamorsin_N 0.55 38.0 4.32e-01 74.3% 93.8%
4682170 7531.1.1.0 a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like 0.55 49.0 4.04e-01 96.0% 96.5%
4939789 2007.13.1.0 a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domains in magnesium chelatase catalytic subunit › Rossmann-like domains in magnesium chelatase catalytic subunit 0.51 35.0 3.86e-01 77.7% 85.3%
D2 medium residues 1-154
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1eb6A00 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.62 51.0 4.87e-01 86.4% 96.0%
4l63A00 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.58 48.0 4.03e-01 86.4% 72.7%
4l7aA00 3.40.390.70 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › 0.55 50.0 4.19e-01 99.4% 70.1%
3tqfA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 38.0 3.79e-01 70.8% 89.1%
6whcA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 29.0 2.63e-01 82.5% 35.2%
1aa1B02 3.20.20.110 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain 0.52 44.0 3.53e-01 91.6% 93.2%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3290645 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.75 44.0 4.91e-01 76.6% 74.2%
5061805 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.73 44.0 5.11e-01 87.7% 83.6%
5057374 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.72 59.0 6.24e-01 93.5% 97.0%
3289669 2498.1.1.10 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.69 65.0 5.37e-01 100.0% 71.9%
5027686 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.69 57.0 5.84e-01 87.0% 90.7%
5057989 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.69 60.0 4.72e-01 93.5% 76.1%
5081098 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.68 64.0 4.94e-01 100.0% 76.2%
4984963 2498.1.1.10 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.68 63.0 5.06e-01 100.0% 92.9%
4943050 2498.1.1.10 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.68 64.0 5.04e-01 100.0% 77.0%
4967466 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.68 44.0 5.16e-01 85.1% 94.3%
4511318 2498.1.1.26 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M56 0.68 64.0 5.34e-01 100.0% 67.2%
3586986 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.68 51.0 5.47e-01 77.9% 94.1%
4385438 2498.1.1.11 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48,Peptidase_M48_N 0.68 63.0 4.56e-01 100.0% 52.4%
3596644 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.68 62.0 4.51e-01 100.0% 51.4%
3701645 2498.1.1.11 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48,Peptidase_M48_N 0.68 62.0 4.50e-01 100.0% 51.4%
3604193 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.67 46.0 4.78e-01 91.6% 73.8%
5080625 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.67 43.0 4.92e-01 93.5% 86.1%
3630394 2498.1.1.11 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48,Peptidase_M48_N 0.67 61.0 4.43e-01 98.1% 60.5%
3696511 2498.1.1.11 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48,Peptidase_M48_N 0.66 61.0 4.37e-01 100.0% 48.4%
3514744 2498.1.1.11 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48,Peptidase_M48_N 0.66 61.0 4.46e-01 100.0% 53.9%
4966006 2498.1.1.163 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF5781 0.66 58.0 4.92e-01 93.5% 75.0%
5074559 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.65 49.0 5.18e-01 91.6% 85.7%
5036683 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.65 51.0 5.56e-01 84.4% 98.5%
3644314 2498.1.1.39 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like 0.65 49.0 5.24e-01 87.7% 91.1%
5075700 2498.1.1.10 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.64 59.0 5.30e-01 98.7% 98.0%
3389181 2498.1.1.9 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 0.64 57.0 4.74e-01 93.5% 67.2%
5014658 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.64 59.0 4.91e-01 100.0% 76.5%
3225917 2498.1.1.23 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M49 0.63 58.0 3.75e-01 100.0% 73.3%
4026483 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.63 55.0 4.85e-01 92.2% 71.4%
3498725 2498.1.1.14 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 0.63 56.0 3.90e-01 94.8% 70.5%
3495934 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.63 55.0 4.04e-01 94.8% 92.0%
4959203 2498.1.1.160 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_MA_2 0.62 57.0 4.89e-01 99.4% 76.6%
3936042 2498.1.1.14 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 0.61 54.0 4.03e-01 94.2% 94.3%
5052908 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.61 52.0 4.71e-01 90.9% 67.8%
3658648 2498.1.1.11 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48,Peptidase_M48_N 0.60 51.0 3.83e-01 90.9% 48.0%
4960313 2498.1.1.160 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_MA_2 0.60 53.0 4.56e-01 96.8% 76.7%
3509435 2498.1.1.39 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like 0.58 46.0 4.95e-01 85.1% 98.5%
4968472 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.58 50.0 4.41e-01 92.9% 78.2%
5051737 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.58 45.0 4.14e-01 90.9% 62.0%
4940509 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.57 36.0 4.23e-01 76.6% 96.0%
5046934 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.55 43.0 4.59e-01 82.5% 99.2%
5012330 2498.1.1.35 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M54 0.55 48.0 4.21e-01 93.5% 91.3%
2588808 2498.1.1.34 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › ATLF 0.54 43.0 3.76e-01 85.1% 75.8%
3517704 2007.2.3.24 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PF27561 0.52 42.0 3.13e-01 85.1% 91.1%
3953551 2498.1.1.29 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.51 46.0 4.25e-01 99.4% 85.5%
D3 medium residues 155-222_287-337
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3v5uA01 6.10.280.80 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region 0.60 28.0 3.46e-01 71.4% 68.4%
1li5A02 1.20.120.640 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.57 36.0 4.06e-01 84.0% 86.2%
2l3lA01 1.20.58.1250 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain 0.56 35.0 3.68e-01 75.6% 68.9%
2auaA02 1.10.3800.10 Mainly Alpha › Orthogonal Bundle › ADP-ribosylation fold › ADP-ribosylation domain 0.53 31.0 3.51e-01 83.2% 74.7%
2nutB01 1.20.120.730 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sec23/Sec24 helical domain 0.52 45.0 4.17e-01 95.0% 75.8%
1wkbA03 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.51 38.0 3.85e-01 84.0% 76.9%
3swhA01 1.10.357.50 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › 0.51 38.0 3.41e-01 77.3% 64.8%
6ldkA01 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.51 40.0 3.57e-01 84.0% 84.3%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3877844 529.1.1.2 few secondary structure elements › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › BSMAP 0.67 41.0 4.65e-01 81.5% 81.1%
3319061 101.28.1.0 alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins 0.62 39.0 4.01e-01 74.8% 66.4%
1560768 101.11.1.1 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.56 38.0 4.09e-01 76.5% 82.4%
4932476 1079.1.1.0 alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA 0.54 40.0 3.39e-01 78.2% 83.8%
5030865 632.18.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 0.54 28.0 3.47e-01 72.3% 80.0%
4109796 632.18.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 0.52 27.0 3.10e-01 70.6% 68.2%
3332799 622.1.1.16 alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › Mem_trans 0.52 42.0 3.80e-01 88.2% 64.4%
4927173 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.51 31.0 3.58e-01 83.2% 82.4%
3195414 604.16.1.0 alpha bundles › Spectrin repeat-like › Hypothetical membrane protein Ta0354, soluble domain › Hypothetical membrane protein Ta0354, soluble domain 0.51 35.0 3.74e-01 81.5% 80.6%
5060143 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.50 27.0 3.27e-01 73.1% 77.5%
3440212 601.18.1.13 alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 › Vwaint 0.50 37.0 3.89e-01 79.8% 86.7%