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MK268344.1__AZU97954.1__CPT_Munch_010__00010

Bact-Vir

MK268344.1__AZU97954.1__CPT_Munch_010__00010

Identity

Accession:
MK268344 ↗
Kingdom:
phage

Quality

92.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 44-96
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ddpA00 1.10.418.40 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Autophagy protein 6/Beclin 1 0.73 44.0 2.95e-01 86.8% 16.4%
3tvkA00 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.71 52.0 3.58e-01 77.4% 43.6%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.42e-01 96.2% 95.8%
2xhsA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.66 50.0 3.21e-01 81.1% 77.4%
1wimA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.66 56.0 4.68e-01 100.0% 54.3%
4o7iA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.65 56.0 3.91e-01 100.0% 95.1%
3nqxA02 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.64 56.0 4.10e-01 100.0% 58.9%
1s9qA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.63 48.0 3.21e-01 84.9% 78.6%
4qxdA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.62 54.0 3.93e-01 100.0% 92.4%
3k59A05 6.10.140.1130 Special › Helix non-globular › Helix Hairpins › 0.62 32.0 3.77e-01 90.6% 69.7%
3pg1A02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.61 53.0 3.62e-01 100.0% 76.9%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 51.0 4.72e-01 100.0% 83.6%
4ynzB02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.61 52.0 3.67e-01 98.1% 75.7%
3oz6B02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.61 52.0 3.49e-01 100.0% 79.8%
4mndA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.61 53.0 3.63e-01 100.0% 35.6%
2z3gB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.60 46.0 3.60e-01 88.7% 87.4%
1bd3A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 45.0 2.97e-01 83.0% 82.1%
6lfzA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.59 46.0 3.08e-01 92.5% 21.2%
3u6uC00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.58 44.0 2.87e-01 84.9% 62.4%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.58 47.0 4.66e-01 96.2% 93.0%
2wtmA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 44.0 2.89e-01 92.5% 18.4%
3r4iA02 6.10.140.960 Special › Helix non-globular › Helix Hairpins › 0.56 48.0 4.62e-01 98.1% 100.0%
3b7wA01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.55 45.0 2.68e-01 94.3% 29.5%
4oevA03 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.54 44.0 3.05e-01 100.0% 91.8%
2napA03 3.40.228.10 Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 0.54 46.0 3.06e-01 100.0% 45.8%
1m7wA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.54 46.0 3.12e-01 100.0% 24.7%
1dq3A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.53 44.0 3.79e-01 96.2% 100.0%
7pbkB02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.52 41.0 3.28e-01 98.1% 45.9%
7zj3D01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.52 37.0 3.32e-01 84.9% 51.9%
3vkhB07 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 39.0 2.76e-01 86.8% 24.9%
3duzA03 6.10.250.3010 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.51 36.0 3.21e-01 100.0% 51.9%
2fhfA04 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 40.0 2.34e-01 94.3% 9.3%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4997165 3352.1.1.0 alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain 0.71 61.0 3.70e-01 100.0% 13.9%
3639059 601.7.1.50 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Gaa1 0.70 46.0 3.00e-01 84.9% 16.4%
4996744 3352.1.1.8 alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PTPS_related 0.69 60.0 3.57e-01 100.0% 12.9%
5018005 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.68 58.0 3.29e-01 96.2% 10.7%
4059289 188.1.1.1 alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.67 50.0 3.24e-01 81.1% 78.3%
5017363 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.65 49.0 3.18e-01 94.3% 18.4%
5017776 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.64 48.0 3.15e-01 94.3% 18.0%
3402781 3704.1.1.0 alpha superhelices › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › Apoptotic protease-activating factor 1 (Apaf-1) helical domain 0.64 43.0 3.02e-01 83.0% 21.7%
3390758 148.1.1.0 alpha arrays › Histone-like › Histone-related › Histone 0.63 44.0 3.55e-01 73.6% 55.0%
4940627 3352.1.1.0 alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain 0.63 54.0 3.25e-01 100.0% 14.6%
3900309 3226.1.1.2 alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › Sulfate_transp 0.63 48.0 2.92e-01 90.6% 80.2%
4241167 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.62 53.0 3.77e-01 100.0% 33.5%
3249058 4018.1.1.2 a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.61 52.0 3.58e-01 100.0% 94.5%
4400946 4018.1.1.2 a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.61 48.0 3.57e-01 88.7% 92.0%
3261668 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 45.0 3.54e-01 100.0% 38.2%
3316017 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.60 53.0 4.62e-01 100.0% 78.8%
3586845 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.60 50.0 4.41e-01 100.0% 78.8%
3972174 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.60 46.0 3.17e-01 83.0% 80.0%
3438467 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.59 51.0 4.37e-01 100.0% 84.4%
3816782 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.59 51.0 4.63e-01 100.0% 80.0%
None 0.59 50.0 2.86e-01 92.5% 17.8%
3775826 4016.1.1.0 alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase 0.59 46.0 3.32e-01 84.9% 42.1%
3269935 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.58 50.0 4.02e-01 100.0% 55.5%
4057677 3001.1.1.1 alpha arrays › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › THDPS_N_2 0.58 49.0 4.22e-01 94.3% 78.8%
3777935 5054.1.1.59 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 0.58 50.0 3.15e-01 98.1% 40.7%
5052301 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.58 47.0 3.41e-01 88.7% 87.6%
3806971 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.58 49.0 4.32e-01 100.0% 70.6%
3929122 188.1.1.1 alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.58 39.0 2.61e-01 71.7% 46.9%
4011414 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.58 44.0 2.90e-01 81.1% 21.9%
3717247 4106.1.1.1 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.58 45.0 2.98e-01 84.9% 27.7%
3336371 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 50.0 3.64e-01 100.0% 65.2%
3317525 7512.1.1.77 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_N 0.58 47.0 3.10e-01 96.2% 22.4%
3249549 109.4.1.109 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 0.58 50.0 3.21e-01 100.0% 20.0%
3229247 188.1.1.1 alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.58 50.0 3.29e-01 98.1% 45.1%
3370450 109.4.1.1224 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_DOCK9 0.57 49.0 2.76e-01 100.0% 10.9%
4083434 5069.1.1.53 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › UPF0182 0.57 46.0 3.15e-01 86.8% 66.1%
None 0.57 48.0 2.75e-01 92.5% 18.9%
3831465 109.24.1.7 alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_A, PF28208 0.57 50.0 2.74e-01 100.0% 8.7%
3176504 7573.1.1.4 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase 0.57 43.0 2.84e-01 94.3% 19.1%
3190040 109.4.1.1556 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_HEAT, PDS5 0.56 43.0 2.42e-01 86.8% 25.2%
5044634 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.56 50.0 3.76e-01 100.0% 41.1%
3632606 109.2.1.18 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › GDE_C 0.56 46.0 2.62e-01 88.7% 20.0%
4946337 7573.1.1.0 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like 0.56 45.0 3.20e-01 100.0% 93.5%
5051450 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.55 46.0 3.07e-01 90.6% 85.9%
3202208 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.55 42.0 2.97e-01 81.1% 32.7%
3627409 6166.1.1.1 alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 0.55 40.0 2.71e-01 77.4% 50.5%
3359773 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.55 44.0 2.77e-01 100.0% 45.6%
4189514 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 48.0 2.78e-01 100.0% 16.4%
5049161 177.1.1.0 alpha bundles › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease 0.55 47.0 3.20e-01 100.0% 81.4%
4167638 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.54 42.0 3.25e-01 84.9% 100.0%
3358136 376.1.1.27 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.54 46.0 4.14e-01 100.0% 77.5%
4243212 109.4.1.1297 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIMELESS, PF27570 0.54 46.0 2.59e-01 100.0% 19.7%
4890967 2004.1.1.182 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_8 0.54 43.0 3.08e-01 100.0% 56.3%
3176201 3567.1.1.159 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › PF29918 0.53 47.0 3.16e-01 100.0% 91.9%
4082175 3001.1.1.1 alpha arrays › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › THDPS_N_2 0.53 45.0 3.87e-01 96.2% 77.6%
3730314 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.53 41.0 2.87e-01 100.0% 93.3%
3218529 109.4.1.121 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mo25 0.53 44.0 2.69e-01 100.0% 13.8%
3501195 601.1.1.112 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Gaa1 0.52 44.0 2.86e-01 96.2% 67.2%
3787128 109.4.1.654 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TFB6 0.52 46.0 2.99e-01 100.0% 65.2%
4030787 605.1.1.303 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Terminase_4 0.51 42.0 3.45e-01 90.6% 48.0%
3594515 206.1.2.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase 0.51 42.0 2.52e-01 90.6% 78.9%
3250588 109.4.1.791 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_17 0.51 42.0 3.59e-01 100.0% 60.0%