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MK279840.1__AZS06572.1__SEA_JACOREN57_5__00005
Bact-VirMK279840.1__AZS06572.1__SEA_JACOREN57_5__00005
Identity
- Accession:
- MK279840 ↗
- Kingdom:
- phage
Quality
73.3
mean pLDDT
Taxonomy
TaxID: 2499043
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 97-161
Domain cluster:
rep: MW073100.1__QWT28898.1__vBMoxSR1_gp48__00048__D76-137
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ubvA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.66 | 51.0 | 4.95e-01 | 84.6% | 76.1% |
| 7x4eA01 | 1.10.1220.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › DNA sulphur modification protein DndE | 0.66 | 45.0 | 3.85e-01 | 72.3% | 99.1% |
| 4d81A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 53.0 | 4.67e-01 | 89.2% | 61.7% |
| 3k9tA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.65 | 49.0 | 3.34e-01 | 84.6% | 63.3% |
| 1w07A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.64 | 49.0 | 3.67e-01 | 83.1% | 67.3% |
| 7r5mA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.63 | 55.0 | 3.73e-01 | 95.4% | 94.6% |
| 1tf5A04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.61 | 44.0 | 3.23e-01 | 78.5% | 27.5% |
| 3qthB00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.60 | 45.0 | 3.40e-01 | 81.5% | 83.5% |
| 3t54A01 | 3.40.50.11950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 48.0 | 4.01e-01 | 89.2% | 87.1% |
| 4qqwA01 | 1.10.3210.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › | 0.60 | 43.0 | 2.93e-01 | 76.9% | 98.0% |
| 3ei3A04 | 1.10.150.910 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.59 | 41.0 | 3.74e-01 | 72.3% | 67.1% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 40.0 | 3.39e-01 | 90.8% | 45.3% |
| 3hulB01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.57 | 40.0 | 3.09e-01 | 75.4% | 37.6% |
| 3h8vB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 42.0 | 2.89e-01 | 78.5% | 24.3% |
| 6h9dA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.56 | 46.0 | 3.67e-01 | 96.9% | 61.5% |
| 1jr8A00 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.56 | 44.0 | 3.82e-01 | 89.2% | 58.1% |
| 4nkwA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.55 | 47.0 | 2.84e-01 | 96.9% | 27.8% |
| 4nxtA01 | 1.10.1410.40 | Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › | 0.55 | 42.0 | 3.43e-01 | 90.8% | 63.4% |
| 3dwbA01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.54 | 45.0 | 2.93e-01 | 95.4% | 84.8% |
| 4r24B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.53 | 40.0 | 3.75e-01 | 83.1% | 77.6% |
| 1iq0A03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.53 | 44.0 | 3.60e-01 | 89.2% | 79.3% |
| 7jpxA02 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.53 | 45.0 | 3.64e-01 | 92.3% | 57.0% |
| 6ncvA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.52 | 37.0 | 3.38e-01 | 75.4% | 83.5% |
| 1rifA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 39.0 | 2.87e-01 | 83.1% | 49.5% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.51 | 34.0 | 2.79e-01 | 70.8% | 36.2% |
| 2hzdA00 | 6.10.20.40 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › TEA/ATTS domain | 0.50 | 40.0 | 3.74e-01 | 87.7% | 87.8% |
| 4l3uA00 | 1.20.1480.40 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 | 0.50 | 37.0 | 3.15e-01 | 83.1% | 63.4% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3219908 | 109.4.1.80 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RRN3 | 0.74 | 40.0 | 2.83e-01 | 93.8% | 20.6% |
| 3386159 | 2498.1.1.7 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3,Peptidase_M3_N | 0.71 | 62.0 | 3.63e-01 | 100.0% | 78.9% |
| 3585138 | 4275.1.1.9 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › PF26809 | 0.70 | 59.0 | 4.34e-01 | 93.8% | 70.9% |
| 3616792 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.68 | 50.0 | 3.57e-01 | 80.0% | 61.0% |
| 3248833 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.67 | 50.0 | 3.66e-01 | 80.0% | 62.3% |
| 3675872 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.67 | 50.0 | 4.03e-01 | 80.0% | 90.4% |
| 3333315 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.67 | 50.0 | 3.42e-01 | 80.0% | 52.0% |
| 3805313 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.67 | 50.0 | 3.58e-01 | 80.0% | 61.1% |
| 1883738 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.66 | 49.0 | 3.56e-01 | 80.0% | 62.8% |
| 3254127 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.66 | 49.0 | 3.55e-01 | 80.0% | 61.7% |
| 3692455 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.65 | 49.0 | 3.44e-01 | 80.0% | 67.3% |
| 3526488 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.65 | 48.0 | 3.47e-01 | 80.0% | 62.1% |
| 4584624 | 103.1.1.3 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CRAL_TRIO_N | 0.63 | 54.0 | 5.04e-01 | 100.0% | 94.1% |
| 5028980 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.62 | 50.0 | 3.56e-01 | 89.2% | 51.0% |
| 4336810 | 304.48.1.10 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS | 0.61 | 46.0 | 3.80e-01 | 83.1% | 69.6% |
| 3952917 | 620.1.1.5 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › MDMPI_N | 0.61 | 41.0 | 3.22e-01 | 70.8% | 91.4% |
| 142419 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.61 | 49.0 | 3.33e-01 | 90.8% | 42.4% |
| 3972060 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.59 | 47.0 | 4.04e-01 | 93.8% | 54.8% |
| 4039355 | 2004.1.1.258 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA,AAA_2 | 0.58 | 40.0 | 2.55e-01 | 72.3% | 52.3% |
| 3435808 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 42.0 | 3.63e-01 | 78.5% | 86.4% |
| 5004297 | 4275.1.1.0 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like | 0.57 | 44.0 | 3.81e-01 | 84.6% | 85.7% |
| 4887928 | 5063.1.1.1 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › PSI_PSAK | 0.57 | 40.0 | 3.92e-01 | 72.3% | 75.7% |
| 3969687 | 3755.3.1.461 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › MksF | 0.57 | 47.0 | 3.11e-01 | 90.8% | 65.8% |
| 3612446 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.57 | 40.0 | 3.50e-01 | 92.3% | 50.5% |
| 5024430 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.57 | 46.0 | 3.09e-01 | 95.4% | 71.9% |
| 3386015 | 5086.1.1.223 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PF28155 | 0.56 | 39.0 | 3.79e-01 | 73.8% | 78.7% |
| 3709158 | 4120.1.1.82 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › Hikeshi-like_C | 0.56 | 38.0 | 3.97e-01 | 70.8% | 81.7% |
| 3491910 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.56 | 38.0 | 3.64e-01 | 84.6% | 61.3% |
| 3725165 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.56 | 45.0 | 3.34e-01 | 89.2% | 84.0% |
| 3627163 | 197.1.1.0 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like | 0.55 | 44.0 | 3.58e-01 | 87.7% | 75.2% |
| 3463739 | 633.21.1.18 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CASP_dom | 0.55 | 50.0 | 3.73e-01 | 100.0% | 70.6% |
| 4335699 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.54 | 42.0 | 2.88e-01 | 84.6% | 75.2% |
| 4953775 | 4163.1.1.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like | 0.53 | 46.0 | 3.73e-01 | 100.0% | 96.2% |
| 4320951 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.53 | 45.0 | 3.25e-01 | 93.8% | 56.8% |
| 3225207 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.52 | 45.0 | 3.36e-01 | 98.5% | 66.7% |
| 3178009 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 40.0 | 2.62e-01 | 83.1% | 28.7% |
| 4490179 | 109.4.1.1289 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30856 | 0.51 | 42.0 | 2.74e-01 | 100.0% | 74.9% |
| 3975632 | 5086.1.1.92 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AprE | 0.51 | 42.0 | 3.04e-01 | 93.8% | 31.4% |
| 3629005 | 3722.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1 | 0.51 | 43.0 | 3.03e-01 | 100.0% | 50.6% |
| 5000893 | 7073.1.1.0 ↗ | alpha arrays › C-terminal domain of Malic enzyme › C-terminal domain of Malic enzyme › C-terminal domain of Malic enzyme | 0.51 | 41.0 | 3.48e-01 | 92.3% | 72.2% |
| 3703764 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 42.0 | 3.05e-01 | 92.3% | 70.5% |
| 3832771 | 2006.1.1.8 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › 5_nucleotid | 0.51 | 38.0 | 2.33e-01 | 83.1% | 14.2% |
| 5059667 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 37.0 | 3.08e-01 | 80.0% | 90.8% |
| 3223244 | 150.1.1.104 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Piezo_THU9_anchor | 0.50 | 42.0 | 3.30e-01 | 95.4% | 67.6% |