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MK279840.1__AZS06632.1__SEA_JACOREN57_70__00070
Bact-VirMK279840.1__AZS06632.1__SEA_JACOREN57_70__00070
Identity
- Accession:
- MK279840 ↗
- Kingdom:
- phage
Quality
85.0
mean pLDDT
Taxonomy
TaxID: 2499043
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-81
Domain cluster:
representative
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2khxA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.65 | 33.0 | 3.35e-01 | 92.2% | 48.1% |
| 5byuA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.64 | 42.0 | 3.55e-01 | 100.0% | 39.8% |
| 3k67A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.62 | 41.0 | 3.25e-01 | 100.0% | 32.7% |
| 2dslA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.62 | 40.0 | 3.56e-01 | 100.0% | 44.3% |
| 2pimA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.62 | 40.0 | 3.36e-01 | 100.0% | 37.9% |
| 2hboA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.62 | 40.0 | 3.34e-01 | 100.0% | 38.3% |
| 2nugB02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 40.0 | 4.12e-01 | 75.3% | 71.8% |
| 2l33A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 41.0 | 3.91e-01 | 71.4% | 59.3% |
| 1ixlA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.60 | 39.0 | 3.31e-01 | 100.0% | 39.5% |
| 2f3xA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.60 | 40.0 | 3.27e-01 | 100.0% | 37.1% |
| 4kcaA03 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 52.0 | 4.88e-01 | 100.0% | 93.8% |
| 2x8fA02 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 52.0 | 4.88e-01 | 100.0% | 93.7% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 39.0 | 3.73e-01 | 72.7% | 56.4% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 38.0 | 3.61e-01 | 70.1% | 53.6% |
| 2dixA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 39.0 | 3.91e-01 | 75.3% | 67.9% |
| 2mcfA00 | 3.40.50.11630 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 51.0 | 4.15e-01 | 100.0% | 57.4% |
| 1i1iP02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.58 | 39.0 | 3.18e-01 | 70.1% | 35.1% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.57 | 47.0 | 3.86e-01 | 93.5% | 55.0% |
| 4u13A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 43.0 | 3.90e-01 | 100.0% | 57.8% |
| 4w78G00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 44.0 | 3.46e-01 | 100.0% | 39.3% |
| 3kh8B01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 42.0 | 3.33e-01 | 100.0% | 39.0% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.57 | 49.0 | 3.85e-01 | 98.7% | 54.1% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 47.0 | 4.26e-01 | 100.0% | 67.0% |
| 2hx5A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 40.0 | 3.33e-01 | 76.6% | 65.0% |
| 6iy8A01 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.56 | 40.0 | 3.11e-01 | 77.9% | 67.2% |
| 3wewA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 40.0 | 2.88e-01 | 76.6% | 36.1% |
| 2gf6A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 40.0 | 3.38e-01 | 76.6% | 64.7% |
| 4xmeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 47.0 | 3.66e-01 | 100.0% | 62.5% |
| 3lifA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 42.0 | 4.06e-01 | 87.0% | 72.2% |
| 2egjA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 39.0 | 3.38e-01 | 76.6% | 67.5% |
| 1z54A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 38.0 | 3.26e-01 | 76.6% | 65.2% |
| 8hmcA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 47.0 | 3.11e-01 | 98.7% | 100.0% |
| 1uisA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.53 | 45.0 | 3.36e-01 | 100.0% | 38.4% |
| 4xmqA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 48.0 | 4.00e-01 | 100.0% | 62.4% |
| 2r78C00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 42.0 | 3.69e-01 | 87.0% | 74.1% |
| 5hwtB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 48.0 | 4.09e-01 | 100.0% | 84.4% |
| 3e0yA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.53 | 48.0 | 3.78e-01 | 100.0% | 53.5% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.53 | 47.0 | 3.88e-01 | 100.0% | 56.5% |
| 2ykfA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 48.0 | 3.83e-01 | 100.0% | 68.5% |
| 3ebyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 44.0 | 3.68e-01 | 100.0% | 58.8% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.52 | 45.0 | 3.94e-01 | 100.0% | 68.5% |
| 3rgaA02 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 44.0 | 3.68e-01 | 100.0% | 63.5% |
| 2basA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 41.0 | 3.68e-01 | 90.9% | 70.7% |
| 6iouA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 47.0 | 4.11e-01 | 100.0% | 70.5% |
| 3lifB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 46.0 | 3.73e-01 | 100.0% | 54.2% |
| 6a5gA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 44.0 | 3.74e-01 | 100.0% | 64.7% |
| 3ec9A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 43.0 | 3.74e-01 | 100.0% | 64.3% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.50 | 43.0 | 3.66e-01 | 100.0% | 69.1% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3764041 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.65 | 43.0 | 4.25e-01 | 70.1% | 65.0% |
| 3191949 | 222.1.1.15 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3C | 0.64 | 43.0 | 3.37e-01 | 100.0% | 32.7% |
| 4299577 | 3121.1.1.15 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › FabA | 0.64 | 42.0 | 4.38e-01 | 100.0% | 74.3% |
| None | — | 0.63 | 48.0 | 4.37e-01 | 85.7% | 73.6% | |
| 4200278 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.61 | 42.0 | 4.24e-01 | 72.7% | 71.2% |
| 4962335 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.61 | 39.0 | 4.17e-01 | 100.0% | 76.9% |
| 4889524 | 222.1.1.29 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl_transf_1, MaoC_dehydratas | 0.60 | 39.0 | 3.31e-01 | 100.0% | 38.5% |
| 3872766 | 298.1.1.12 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Biliv-reduc_cat | 0.59 | 49.0 | 4.20e-01 | 92.2% | 59.2% |
| 3470047 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.57 | 44.0 | 4.30e-01 | 98.7% | 75.3% |
| 3304391 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.57 | 49.0 | 4.11e-01 | 100.0% | 64.1% |
| 150440 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.57 | 49.0 | 3.88e-01 | 98.7% | 55.8% |
| 5041730 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.57 | 45.0 | 3.81e-01 | 98.7% | 49.0% |
| 3508799 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.56 | 36.0 | 3.64e-01 | 71.4% | 62.5% |
| 4647063 | 223.1.1.6 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 | 0.56 | 44.0 | 3.10e-01 | 84.4% | 40.0% |
| 3689156 | 3435.1.1.2 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-N | 0.56 | 44.0 | 3.41e-01 | 87.0% | 50.0% |
| 3942044 | 814.1.1.2 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › Chor_lyase | 0.56 | 49.0 | 3.84e-01 | 98.7% | 92.1% |
| 3435374 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 37.0 | 3.66e-01 | 74.0% | 63.5% |
| 3219430 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.55 | 43.0 | 3.85e-01 | 100.0% | 59.1% |
| 3626962 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.55 | 48.0 | 3.48e-01 | 100.0% | 71.1% |
| 4963926 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 49.0 | 3.83e-01 | 100.0% | 52.5% |
| 3246974 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.54 | 37.0 | 3.44e-01 | 71.4% | 65.0% |
| 4966947 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.54 | 47.0 | 3.12e-01 | 100.0% | 94.9% |
| 3288346 | 223.1.1.37 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Rv3651-like_N | 0.54 | 48.0 | 4.51e-01 | 100.0% | 91.6% |
| 3831398 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.53 | 37.0 | 3.53e-01 | 72.7% | 62.2% |
| 4996769 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 43.0 | 3.75e-01 | 89.6% | 70.0% |
| 3481273 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 36.0 | 3.35e-01 | 76.6% | 53.3% |
| 3331706 | 222.1.1.5 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › FabA | 0.53 | 35.0 | 3.58e-01 | 98.7% | 69.2% |
| 4955758 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.53 | 43.0 | 3.02e-01 | 100.0% | 26.3% |
| 4931757 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 41.0 | 3.67e-01 | 89.6% | 72.5% |
| 4993088 | 264.2.1.1 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac | 0.52 | 40.0 | 3.51e-01 | 100.0% | 53.3% |
| 1713365 | 223.1.1.51 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 | 0.52 | 48.0 | 3.65e-01 | 100.0% | 47.6% |
| 3939992 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 37.0 | 3.38e-01 | 76.6% | 58.2% |
| 4944871 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.52 | 40.0 | 3.54e-01 | 85.7% | 73.3% |
| 5045208 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.52 | 47.0 | 3.42e-01 | 100.0% | 43.8% |
| 4283257 | 243.3.1.52 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › UPF0182 | 0.51 | 42.0 | 2.82e-01 | 93.5% | 65.2% |
| 3497652 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.51 | 44.0 | 4.34e-01 | 100.0% | 89.4% |
| 3630069 | 223.1.1.101 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30734 | 0.51 | 43.0 | 2.55e-01 | 100.0% | 12.1% |
| 3344044 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 35.0 | 3.40e-01 | 72.7% | 72.2% |
| 3629963 | 330.1.1.6 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Staufen_C | 0.51 | 36.0 | 3.36e-01 | 75.3% | 63.6% |
| 3590914 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.51 | 37.0 | 3.34e-01 | 100.0% | 55.5% |
| 4957500 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.51 | 40.0 | 3.86e-01 | 92.2% | 95.8% |
| 2895578 | 223.1.1.51 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 | 0.50 | 41.0 | 3.43e-01 | 90.9% | 52.5% |
| 4980704 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.50 | 46.0 | 4.06e-01 | 100.0% | 87.3% |
| 3452819 | 330.1.1.5 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM | 0.50 | 35.0 | 3.36e-01 | 75.3% | 67.3% |