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MK279909.1__AZS12641.1__SEA_DRLUPO_105__00105
Bact-VirMK279909.1__AZS12641.1__SEA_DRLUPO_105__00105
Identity
- Accession:
- MK279909 ↗
- Kingdom:
- phage
Quality
61.5
mean pLDDT
Taxonomy
TaxID: 2499037
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 28-87
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hi8B00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.70 | 48.0 | 4.56e-01 | 75.0% | 59.7% |
| 4b6dB00 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.70 | 49.0 | 5.04e-01 | 80.0% | 78.9% |
| 1uw0A01 | 3.30.1740.10 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type | 0.69 | 50.0 | 4.34e-01 | 78.3% | 58.3% |
| 7r71A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 53.0 | 5.19e-01 | 85.0% | 76.6% |
| 1v9xA00 | 3.30.1740.10 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type | 0.68 | 55.0 | 4.42e-01 | 88.3% | 50.9% |
| 4v3lC00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.65 | 50.0 | 4.76e-01 | 83.3% | 71.0% |
| 1mv3A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 44.0 | 4.20e-01 | 78.3% | 81.1% |
| 3cp0A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 47.0 | 4.67e-01 | 85.0% | 98.4% |
| 1u3oA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 41.0 | 4.09e-01 | 80.0% | 83.9% |
| 1s1nA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 40.0 | 4.00e-01 | 78.3% | 76.7% |
| 2ke9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 41.0 | 4.02e-01 | 81.7% | 76.1% |
| 1zuyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 38.0 | 3.86e-01 | 73.3% | 81.0% |
| 5jouA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 39.0 | 3.71e-01 | 83.3% | 72.2% |
| 1u5uA00 | 2.40.180.10 | Mainly Beta › Beta Barrel › Catalase HpII, Chain A, domain 1 › Catalase core domain | 0.53 | 46.0 | 2.85e-01 | 100.0% | 45.9% |
| 3kfvA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 38.0 | 3.33e-01 | 85.0% | 48.0% |
| 2k5wA00 | 2.40.50.480 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 | 0.52 | 37.0 | 3.13e-01 | 76.7% | 80.2% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 36.0 | 3.49e-01 | 71.7% | 71.6% |
| 2kymA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 36.0 | 3.18e-01 | 73.3% | 49.5% |
| 2v1rA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 37.0 | 3.66e-01 | 80.0% | 83.6% |
| 2k5hA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 39.0 | 3.72e-01 | 88.3% | 84.9% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 38.0 | 3.73e-01 | 83.3% | 75.8% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4944275 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.82 | 62.0 | 5.87e-01 | 86.7% | 68.6% |
| 3257948 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.79 | 59.0 | 5.68e-01 | 80.0% | 73.5% |
| 4929230 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.78 | 51.0 | 5.84e-01 | 73.3% | 100.0% |
| 3680545 | 376.1.1.40 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_11 | 0.76 | 58.0 | 4.78e-01 | 81.7% | 49.5% |
| 3642794 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.75 | 58.0 | 5.35e-01 | 81.7% | 70.7% |
| 3336718 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.75 | 58.0 | 5.16e-01 | 83.3% | 63.5% |
| 3463608 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.75 | 57.0 | 5.38e-01 | 80.0% | 68.6% |
| 3584076 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.74 | 51.0 | 4.60e-01 | 81.7% | 51.8% |
| 3889754 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.74 | 52.0 | 5.27e-01 | 80.0% | 75.0% |
| 4654276 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.71 | 51.0 | 4.25e-01 | 76.7% | 49.5% |
| 3683145 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.71 | 53.0 | 4.34e-01 | 80.0% | 45.5% |
| 3351761 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.71 | 51.0 | 4.36e-01 | 76.7% | 52.6% |
| 3933161 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.70 | 51.0 | 5.25e-01 | 81.7% | 83.6% |
| 3240342 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.70 | 52.0 | 5.38e-01 | 80.0% | 87.3% |
| 3624531 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.69 | 49.0 | 5.41e-01 | 76.7% | 100.0% |
| 5045085 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.69 | 53.0 | 4.78e-01 | 83.3% | 61.3% |
| 3776332 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.69 | 51.0 | 5.46e-01 | 80.0% | 98.0% |
| 3567499 | 376.1.2.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › LIM | 0.69 | 51.0 | 4.41e-01 | 80.0% | 53.7% |
| 158834 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.69 | 57.0 | 4.43e-01 | 93.3% | 50.0% |
| 3526067 | 376.1.2.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › LIM+PET | 0.68 | 52.0 | 3.65e-01 | 81.7% | 31.7% |
| 3592264 | 377.1.2.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger | 0.68 | 60.0 | 4.88e-01 | 100.0% | 92.2% |
| 3863831 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.68 | 51.0 | 3.52e-01 | 80.0% | 24.6% |
| 4002849 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.68 | 48.0 | 5.23e-01 | 83.3% | 100.0% |
| 3395156 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.68 | 53.0 | 4.33e-01 | 86.7% | 52.2% |
| 3887581 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.67 | 51.0 | 5.46e-01 | 85.0% | 98.0% |
| 3250863 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.67 | 52.0 | 4.69e-01 | 85.0% | 62.4% |
| 3700246 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.66 | 57.0 | 4.60e-01 | 96.7% | 87.8% |
| 3662203 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.66 | 51.0 | 4.55e-01 | 85.0% | 58.8% |
| 3459484 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.66 | 50.0 | 5.19e-01 | 81.7% | 92.7% |
| 3394414 | 376.1.2.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › LIM+PET | 0.66 | 52.0 | 3.90e-01 | 86.7% | 81.8% |
| 3444560 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.65 | 50.0 | 4.65e-01 | 83.3% | 77.3% |
| 3865409 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.65 | 50.0 | 5.01e-01 | 85.0% | 88.3% |
| 4028826 | 377.1.2.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger | 0.65 | 53.0 | 4.30e-01 | 93.3% | 64.2% |
| 3771625 | 376.1.2.6 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › PET | 0.64 | 50.0 | 4.48e-01 | 85.0% | 91.8% |
| 3736933 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.63 | 45.0 | 4.47e-01 | 80.0% | 72.3% |
| 3804586 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.60 | 46.0 | 4.77e-01 | 86.7% | 98.2% |
| 3702038 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.58 | 47.0 | 4.64e-01 | 91.7% | 96.9% |
| 3243536 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 43.0 | 3.93e-01 | 91.7% | 61.2% |
| 3243865 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.55 | 43.0 | 3.45e-01 | 88.3% | 55.4% |
| 4004354 | 10.12.1.115 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PF30437 | 0.55 | 40.0 | 3.22e-01 | 81.7% | 92.6% |
| 3923675 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.55 | 40.0 | 4.00e-01 | 86.7% | 76.9% |
| 4007792 | 10.12.1.115 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PF30437 | 0.55 | 41.0 | 3.27e-01 | 85.0% | 90.4% |
| 4939053 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 41.0 | 4.00e-01 | 88.3% | 78.6% |
| 3623837 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 40.0 | 3.69e-01 | 83.3% | 75.0% |
| 5029166 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 43.0 | 4.07e-01 | 95.0% | 82.4% |
| 3624017 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.53 | 40.0 | 3.97e-01 | 85.0% | 78.5% |
| 3406712 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 41.0 | 3.84e-01 | 91.7% | 67.5% |
| 3521040 | 11.1.1.550 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin_3 | 0.52 | 38.0 | 3.20e-01 | 81.7% | 60.9% |
| 3573620 | 4.1.1.318 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26085 | 0.51 | 38.0 | 3.86e-01 | 85.0% | 85.0% |
| 3389432 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.51 | 37.0 | 3.56e-01 | 85.0% | 65.3% |
| 3090474 | 4020.1.1.0 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes | 0.51 | 35.0 | 2.81e-01 | 75.0% | 53.6% |
| 3944739 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.51 | 37.0 | 3.17e-01 | 81.7% | 66.4% |
| 3897602 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 40.0 | 3.58e-01 | 95.0% | 63.2% |
| 3895159 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 36.0 | 3.66e-01 | 83.3% | 86.7% |