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MK288022.1__AZU99090.1__pW4_75__00065

Bact-Vir

MK288022.1__AZU99090.1__pW4_75__00065

Identity

Accession:
MK288022 ↗
Kingdom:
phage

Quality

88.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-65
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gs5A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.76 68.0 4.79e-01 100.0% 83.0%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.75 54.0 5.94e-01 84.1% 96.0%
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.75 56.0 5.99e-01 85.7% 92.6%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.75 55.0 5.98e-01 84.1% 98.0%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 57.0 5.71e-01 81.0% 87.3%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 56.0 5.03e-01 85.7% 60.0%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 54.0 5.99e-01 81.0% 100.0%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 56.0 5.13e-01 85.7% 77.4%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 53.0 5.78e-01 81.0% 98.0%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 55.0 5.58e-01 84.1% 90.3%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.70 62.0 5.47e-01 100.0% 80.4%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 52.0 5.56e-01 84.1% 100.0%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.68 59.0 4.12e-01 98.4% 49.1%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 50.0 4.64e-01 77.8% 84.6%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.68 53.0 5.42e-01 84.1% 95.0%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 52.0 4.57e-01 84.1% 83.3%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 53.0 4.10e-01 85.7% 66.7%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 49.0 5.35e-01 77.8% 100.0%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 53.0 5.40e-01 87.3% 88.3%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 51.0 5.29e-01 82.5% 89.8%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 53.0 5.12e-01 85.7% 78.9%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 52.0 4.73e-01 84.1% 84.3%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 52.0 5.40e-01 84.1% 98.2%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 54.0 5.21e-01 93.7% 78.1%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.66 49.0 5.28e-01 79.4% 96.3%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.65 49.0 5.33e-01 95.2% 98.1%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 46.0 4.75e-01 74.6% 100.0%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 52.0 5.46e-01 87.3% 98.2%
1e5tA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.64 49.0 3.06e-01 82.5% 38.2%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.64 50.0 4.39e-01 85.7% 67.4%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 46.0 4.76e-01 77.8% 98.3%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 46.0 4.95e-01 77.8% 100.0%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 51.0 5.12e-01 93.7% 87.5%
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.62 48.0 4.48e-01 85.7% 90.2%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 46.0 4.68e-01 79.4% 100.0%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.62 55.0 4.70e-01 100.0% 72.5%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 45.0 4.25e-01 79.4% 74.7%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.61 54.0 5.30e-01 100.0% 97.0%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 45.0 4.49e-01 79.4% 92.2%
2m0yA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 47.0 4.46e-01 84.1% 83.8%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.60 49.0 4.34e-01 92.1% 84.0%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 50.0 3.99e-01 93.7% 65.1%
6l6jA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 47.0 3.70e-01 87.3% 97.8%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 48.0 3.49e-01 90.5% 65.8%
4cp6A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.59 41.0 2.51e-01 73.0% 14.1%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.58 44.0 4.74e-01 81.0% 100.0%
2x8fA02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.58 43.0 3.81e-01 81.0% 98.9%
3tu3B01 3.30.720.80 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.57 42.0 4.01e-01 82.5% 68.4%
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.56 38.0 3.31e-01 71.4% 68.3%
1jqpA01 2.40.128.80 Mainly Beta › Beta Barrel › Lipocalin › Cathepsin C, exclusion domain 0.56 41.0 3.46e-01 81.0% 62.5%
1crmA00 3.10.200.10 Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase 0.54 40.0 2.73e-01 81.0% 46.5%
2vnuD04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 41.0 3.85e-01 82.5% 84.8%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.54 46.0 3.32e-01 98.4% 88.2%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 44.0 3.66e-01 93.7% 87.4%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 44.0 4.38e-01 96.8% 98.5%
3k30A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 45.0 3.59e-01 100.0% 68.4%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4348606 4.1.1.440 beta barrels › SH3 › SH3 › SH3 › PF27165 0.86 68.0 6.74e-01 84.1% 86.2%
4980648 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 66.0 6.34e-01 85.7% 75.7%
4946165 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 62.0 6.61e-01 84.1% 90.9%
5058671 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 62.0 6.57e-01 85.7% 90.9%
5060760 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.82 63.0 6.31e-01 85.7% 80.0%
4994957 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 63.0 6.67e-01 84.1% 94.5%
4997767 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 55.0 6.26e-01 73.0% 100.0%
5063537 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.80 58.0 5.95e-01 85.7% 80.0%
4990212 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 59.0 6.22e-01 84.1% 90.9%
3603357 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 61.0 6.51e-01 85.7% 94.5%
5017214 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 60.0 6.36e-01 85.7% 92.7%
4011604 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.79 63.0 5.93e-01 85.7% 77.3%
4967397 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.78 61.0 6.10e-01 85.7% 81.5%
4947995 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 59.0 6.26e-01 85.7% 92.7%
3961546 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.78 59.0 5.87e-01 85.7% 78.5%
3486330 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 56.0 6.17e-01 85.7% 96.0%
5033075 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 58.0 6.12e-01 85.7% 90.9%
4975150 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 62.0 6.34e-01 85.7% 90.0%
4027309 73.1.1.1 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.77 58.0 5.16e-01 81.0% 100.0%
4952887 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 57.0 6.07e-01 85.7% 90.9%
5013892 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 60.0 6.35e-01 85.7% 96.4%
4015071 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 62.0 6.02e-01 87.3% 78.6%
4950396 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 54.0 5.73e-01 85.7% 85.5%
5036647 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.77 58.0 5.65e-01 87.3% 72.9%
3711384 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 59.0 5.33e-01 84.1% 69.4%
3961013 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.75 56.0 5.42e-01 85.7% 71.4%
3510526 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 59.0 6.29e-01 85.7% 100.0%
4369736 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.75 50.0 5.71e-01 82.5% 97.8%
4182977 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.75 54.0 5.57e-01 87.3% 80.0%
3914746 4.1.1.128 beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.75 56.0 5.40e-01 79.4% 77.1%
5025079 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 57.0 5.99e-01 85.7% 94.5%
4024914 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.74 53.0 5.43e-01 74.6% 81.7%
4992872 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 57.0 6.02e-01 85.7% 96.4%
3547106 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 63.0 5.51e-01 93.7% 67.8%
5079023 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 48.0 5.41e-01 73.0% 95.6%
3765274 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 62.0 5.47e-01 93.7% 67.8%
3570399 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 58.0 5.82e-01 88.9% 92.3%
4936291 4.1.1.487 beta barrels › SH3 › SH3 › SH3 › DUF7205 0.72 56.0 5.63e-01 84.1% 90.8%
4550511 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.72 48.0 5.45e-01 76.2% 97.8%
3302818 4.1.1.236 beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.71 53.0 5.60e-01 85.7% 90.9%
5044373 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 55.0 5.68e-01 87.3% 88.3%
4031578 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 49.0 5.39e-01 85.7% 92.0%
3576128 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 65.0 5.26e-01 100.0% 80.0%
4000280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 56.0 5.89e-01 85.7% 96.4%
5040416 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 52.0 5.61e-01 85.7% 100.0%
3740753 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.70 52.0 5.24e-01 81.0% 76.9%
4372288 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.70 52.0 5.39e-01 82.5% 83.3%
4962256 101.1.2.937 alpha arrays › HTH › HTH › winged helix domain › PF25943 0.70 54.0 4.52e-01 84.1% 80.9%
3323530 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.70 54.0 5.44e-01 84.1% 95.4%
3581896 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.70 54.0 5.37e-01 82.5% 81.5%
4883808 148.1.3.202 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › KOW5_SPT5 0.70 53.0 5.68e-01 84.1% 98.1%
3923813 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.59e-01 87.3% 98.5%
3169607 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.69 52.0 4.94e-01 84.1% 68.0%
3492757 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 56.0 5.43e-01 88.9% 88.6%
3261395 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 55.0 5.73e-01 85.7% 93.1%
3275404 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 55.0 5.61e-01 85.7% 90.0%
3684908 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.69 53.0 5.02e-01 84.1% 69.3%
4660107 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.69 52.0 5.35e-01 84.1% 85.0%
3358753 4.1.1.381 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 0.69 54.0 3.92e-01 84.1% 32.1%
3486328 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 53.0 5.49e-01 84.1% 90.0%
3671986 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.68 54.0 5.26e-01 85.7% 77.1%
4881976 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.68 52.0 4.97e-01 84.1% 70.3%
3622846 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 51.0 5.58e-01 79.4% 100.0%
3261235 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 58.0 5.23e-01 93.7% 72.9%
3881117 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 62.0 5.26e-01 100.0% 91.0%
3586487 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 55.0 4.96e-01 100.0% 64.7%
4029093 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 52.0 3.89e-01 84.1% 33.5%
3398093 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.68 54.0 5.54e-01 85.7% 90.0%
2726885 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 55.0 4.55e-01 88.9% 77.0%
4098445 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.68 53.0 5.44e-01 84.1% 88.3%
4629022 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.68 52.0 5.04e-01 82.5% 84.3%
3604264 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 50.0 4.36e-01 81.0% 80.0%
None 0.67 49.0 2.76e-01 77.8% 8.7%
None 0.67 49.0 2.72e-01 77.8% 8.0%
3241890 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 52.0 4.45e-01 84.1% 67.0%
5074039 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 52.0 4.93e-01 85.7% 85.3%
3883159 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.66 52.0 4.61e-01 85.7% 61.1%
4890270 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.65 48.0 5.16e-01 96.8% 92.6%
3931905 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 54.0 4.39e-01 90.5% 88.7%
3482646 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 49.0 3.41e-01 81.0% 33.0%
3366578 4.1.1.325 beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.64 53.0 4.32e-01 92.1% 83.3%
3479037 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 47.0 4.38e-01 79.4% 73.8%
4942017 5090.1.1.0 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.63 53.0 4.38e-01 93.7% 97.4%
3230400 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 46.0 4.56e-01 77.8% 98.5%
2725406 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 46.0 4.25e-01 79.4% 72.0%
3469800 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 43.0 4.04e-01 74.6% 70.0%
3765126 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 43.0 4.50e-01 73.0% 100.0%
158943 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 45.0 4.19e-01 79.4% 74.7%
3240406 4.1.1.347 beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.61 53.0 4.38e-01 100.0% 87.0%
3266702 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 43.0 3.91e-01 79.4% 77.4%
3791430 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 41.0 4.31e-01 73.0% 100.0%
3605755 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 42.0 2.68e-01 88.9% 32.7%