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MK290737.1__AZV02083.1__Arno162_43__00043

Bact-Vir

MK290737.1__AZV02083.1__Arno162_43__00043

Identity

Accession:
MK290737 ↗
Kingdom:
phage

Quality

83.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Andersonviridae› Arnovirus› Pectobacterium_phage_Arno162

TaxID: 2500577

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-82
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 56.0 6.44e-01 100.0% 98.1%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.79 50.0 4.92e-01 100.0% 62.3%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.72 46.0 4.19e-01 100.0% 49.0%
3e1sA04 2.30.30.940 Mainly Beta › Roll › SH3 type barrels. › 0.72 48.0 4.99e-01 100.0% 73.9%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 43.0 5.15e-01 100.0% 91.8%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 49.0 5.46e-01 100.0% 93.0%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 52.0 5.47e-01 100.0% 89.4%
2db9A01 3.90.70.200 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Plus-3 domain 0.61 47.0 3.83e-01 100.0% 45.1%
1jqpA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 53.0 3.70e-01 100.0% 35.1%
3upuA03 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.53 48.0 3.96e-01 100.0% 93.9%
2jo6A00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.51 36.0 3.22e-01 74.3% 93.6%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3978220 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.87 80.0 7.63e-01 100.0% 91.8%
5060804 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.77 49.0 4.60e-01 100.0% 53.3%
4367301 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 49.0 5.60e-01 100.0% 87.3%
5033242 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.77 49.0 4.68e-01 100.0% 56.5%
4977702 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.75 48.0 4.57e-01 100.0% 56.5%
4885908 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.75 48.0 4.32e-01 100.0% 49.0%
4253108 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.74 47.0 4.47e-01 100.0% 54.5%
5005903 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.74 47.0 4.22e-01 100.0% 48.0%
4947175 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.73 47.0 4.37e-01 100.0% 53.3%
4943876 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.73 46.0 4.27e-01 100.0% 50.5%
5046193 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.73 46.0 4.34e-01 100.0% 53.3%
136401 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.73 46.0 4.03e-01 100.0% 43.2%
5038850 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.72 46.0 4.31e-01 100.0% 53.3%
4956196 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.71 43.0 4.62e-01 97.3% 70.8%
3604145 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 43.0 4.69e-01 100.0% 76.7%
3929784 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 45.0 5.35e-01 100.0% 98.0%
4660084 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 45.0 4.62e-01 100.0% 71.0%
3931418 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 48.0 5.25e-01 100.0% 90.0%
3631298 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 52.0 5.18e-01 100.0% 78.7%
4527355 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 44.0 4.55e-01 100.0% 71.0%
4302032 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 42.0 4.47e-01 100.0% 75.4%
5065841 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.65 42.0 4.11e-01 100.0% 59.5%
4359892 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.63 39.0 3.88e-01 100.0% 58.7%
5049139 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.62 41.0 3.76e-01 100.0% 51.0%
3546727 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.61 51.0 4.46e-01 100.0% 61.1%
3266698 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.61 53.0 4.36e-01 100.0% 52.6%
4055111 4.1.1.7 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.60 55.0 4.56e-01 100.0% 61.6%
3480724 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 51.0 3.77e-01 100.0% 38.4%
5001502 2003.1.5.13 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.54 37.0 2.54e-01 94.6% 19.1%
4163851 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.53 34.0 3.63e-01 98.6% 80.0%
4996605 70.3.1.12 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › PF30644 0.52 36.0 3.56e-01 73.0% 91.3%
3955047 376.1.2.22 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › PF27609 0.52 36.0 3.99e-01 74.3% 95.0%