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MK291441.1__AZV00184.1__pben1_p27__00026
Bact-VirMK291441.1__AZV00184.1__pben1_p27__00026
Identity
- Accession:
- MK291441 ↗
- Kingdom:
- phage
Quality
73.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-59
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tc3C00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.85 | 59.0 | 6.15e-01 | 71.4% | 80.4% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 64.0 | 6.05e-01 | 80.4% | 72.7% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.76 | 54.0 | 5.45e-01 | 75.0% | 75.0% |
| 2iw5B00 | 1.20.58.1880 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 53.0 | 4.11e-01 | 82.1% | 36.1% |
| 2lvsA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 47.0 | 4.96e-01 | 71.4% | 81.6% |
| 1ef4A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 45.0 | 4.57e-01 | 73.2% | 87.3% |
| 1g2hA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 44.0 | 4.36e-01 | 75.0% | 73.8% |
| 3ls1A00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.60 | 42.0 | 3.23e-01 | 75.0% | 91.0% |
| 1ypxA00 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.51 | 43.0 | 2.75e-01 | 96.4% | 63.8% |
| 2nyxB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 36.0 | 2.68e-01 | 75.0% | 34.5% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3544647 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.91 | 63.0 | 5.93e-01 | 71.4% | 61.5% |
| 5056682 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 63.0 | 5.75e-01 | 73.2% | 58.6% |
| 3919175 | 101.1.1.129 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 | 0.88 | 60.0 | 4.69e-01 | 71.4% | 37.3% |
| 4002185 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.86 | 59.0 | 5.31e-01 | 71.4% | 53.3% |
| 4976345 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.86 | 59.0 | 5.75e-01 | 71.4% | 66.7% |
| 3404418 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.85 | 61.0 | 5.61e-01 | 75.0% | 61.4% |
| 4002905 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 58.0 | 5.55e-01 | 71.4% | 61.5% |
| 3565285 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.85 | 58.0 | 5.51e-01 | 71.4% | 61.5% |
| 3741290 | 101.1.1.201 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Bot1p | 0.85 | 58.0 | 4.86e-01 | 71.4% | 44.4% |
| 5011648 | 101.1.1.368 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 | 0.84 | 60.0 | 6.36e-01 | 75.0% | 86.0% |
| 3789627 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 63.0 | 6.03e-01 | 80.4% | 73.8% |
| 3505559 | 101.1.6.19 ↗ | alpha arrays › HTH › HTH › TrpR › PAX | 0.83 | 63.0 | 5.68e-01 | 80.4% | 64.0% |
| 4957415 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.83 | 57.0 | 5.58e-01 | 71.4% | 66.7% |
| 5024511 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 60.0 | 6.34e-01 | 76.8% | 86.0% |
| 3988724 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 56.0 | 5.52e-01 | 71.4% | 70.0% |
| 3501262 | 101.1.6.18 ↗ | alpha arrays › HTH › HTH › TrpR › Zn_ribbon_ISL3 | 0.82 | 60.0 | 4.32e-01 | 76.8% | 77.2% |
| 3589192 | 101.1.1.68 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 | 0.82 | 58.0 | 5.14e-01 | 75.0% | 52.5% |
| 4967740 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 60.0 | 6.12e-01 | 80.4% | 83.6% |
| 5004840 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 60.0 | 5.33e-01 | 80.4% | 57.5% |
| 3869081 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.80 | 58.0 | 5.02e-01 | 76.8% | 52.9% |
| 3589184 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 60.0 | 5.34e-01 | 78.6% | 62.7% |
| 3590401 | 375.1.1.90 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ISL3 | 0.80 | 59.0 | 4.29e-01 | 78.6% | 80.0% |
| 4501711 | 101.1.1.68 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 | 0.79 | 55.0 | 5.11e-01 | 73.2% | 58.6% |
| 4031116 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 58.0 | 5.74e-01 | 80.4% | 78.3% |
| 3589364 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.77 | 57.0 | 4.27e-01 | 78.6% | 74.8% |
| 3783362 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.77 | 52.0 | 2.93e-01 | 71.4% | 6.5% |
| 3640035 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 58.0 | 5.01e-01 | 92.9% | 60.0% |
| 5057644 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 48.0 | 4.48e-01 | 83.9% | 64.3% |