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MK291441.1__AZV00199.1__pben1_p42__00041
Bact-VirMK291441.1__AZV00199.1__pben1_p42__00041
Identity
- Accession:
- MK291441 ↗
- Kingdom:
- phage
Quality
77.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-105
Domain cluster:
rep: OP810509.1__WAK43900.1__IAPFLPAM_00040__00040__D27-100
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05354.18 best | Phage_attach | 44.8 | 2.20e-11 | 97.7% | 71.7% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4f4oC03 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.70 | 59.0 | 5.86e-01 | 100.0% | 88.8% |
| 1wosA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.67 | 46.0 | 4.62e-01 | 94.3% | 70.9% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.66 | 53.0 | 5.18e-01 | 87.4% | 79.6% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.66 | 59.0 | 5.67e-01 | 96.6% | 99.0% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.66 | 60.0 | 4.99e-01 | 100.0% | 76.2% |
| 3s9cA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.65 | 58.0 | 5.20e-01 | 100.0% | 79.2% |
| 1vx2I02 | 3.10.290.70 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › | 0.64 | 37.0 | 3.37e-01 | 100.0% | 43.4% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.63 | 57.0 | 4.65e-01 | 100.0% | 78.1% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.62 | 54.0 | 4.29e-01 | 95.4% | 48.3% |
| 3w1eA03 | 2.40.10.410 | Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain | 0.58 | 44.0 | 4.36e-01 | 83.9% | 76.4% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 47.0 | 4.19e-01 | 94.3% | 61.1% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 40.0 | 3.93e-01 | 86.2% | 66.7% |
| 3q0bX00 | 2.30.280.10 | Mainly Beta › Roll › PUA domain-like › SRA-YDG | 0.56 | 49.0 | 4.14e-01 | 100.0% | 76.4% |
| 2x7fC01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 44.0 | 4.28e-01 | 100.0% | 78.7% |
| 1vq8B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 45.0 | 3.90e-01 | 90.8% | 73.7% |
| 1a2vA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.54 | 39.0 | 2.63e-01 | 80.5% | 80.9% |
| 1dr9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 38.0 | 3.70e-01 | 85.1% | 67.4% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.53 | 47.0 | 4.10e-01 | 100.0% | 91.9% |
| 2cc6A00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.53 | 35.0 | 3.94e-01 | 78.2% | 92.2% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.93e-01 | 86.2% | 79.1% |
| 4lusB01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.52 | 45.0 | 3.82e-01 | 98.9% | 57.0% |
| 3bqjA01 | 2.40.510.10 | Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses | 0.52 | 43.0 | 3.41e-01 | 94.3% | 97.9% |
| 4p25D01 | 2.40.510.10 | Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses | 0.52 | 42.0 | 3.38e-01 | 93.1% | 95.4% |
| 3pg1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 41.0 | 3.60e-01 | 86.2% | 64.3% |
| 5i4nA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 41.0 | 4.08e-01 | 100.0% | 82.6% |
| 2y8yA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.50 | 37.0 | 3.37e-01 | 78.2% | 67.0% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4631894 | 1.1.12.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth | 0.77 | 52.0 | 4.72e-01 | 100.0% | 53.0% |
| 3447802 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 55.0 | 5.52e-01 | 100.0% | 74.4% |
| 3058418 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.71 | 63.0 | 5.96e-01 | 100.0% | 80.4% |
| 5038876 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.70 | 66.0 | 6.52e-01 | 98.9% | 96.7% |
| 5082328 | 1.1.13.77 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join_3 | 0.69 | 63.0 | 6.16e-01 | 97.7% | 97.9% |
| 4883825 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.69 | 64.0 | 6.29e-01 | 100.0% | 94.6% |
| 4094235 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.67 | 59.0 | 5.21e-01 | 100.0% | 67.2% |
| 4032883 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.66 | 61.0 | 5.73e-01 | 100.0% | 93.3% |
| 4402697 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.65 | 57.0 | 5.08e-01 | 100.0% | 69.2% |
| 4988096 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.64 | 56.0 | 5.20e-01 | 100.0% | 99.1% |
| 5022644 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 47.0 | 4.65e-01 | 90.8% | 72.6% |
| 3598222 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 34.0 | 3.74e-01 | 96.6% | 65.7% |
| 3393534 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.62 | 55.0 | 4.18e-01 | 100.0% | 42.3% |
| 5082938 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.62 | 42.0 | 3.81e-01 | 71.3% | 92.8% |
| 5082946 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.61 | 52.0 | 5.28e-01 | 90.8% | 100.0% |
| 4957568 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.60 | 53.0 | 5.40e-01 | 95.4% | 98.8% |
| 4989528 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.55 | 39.0 | 3.63e-01 | 75.9% | 80.9% |
| None | — | 0.51 | 40.0 | 2.46e-01 | 100.0% | 12.6% | |
| 3561967 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.51 | 41.0 | 2.80e-01 | 100.0% | 24.1% |
| 4197937 | 223.1.1.24 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 | 0.51 | 36.0 | 3.30e-01 | 74.7% | 78.3% |
| 3261290 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.51 | 40.0 | 3.55e-01 | 85.1% | 59.2% |