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MK291441.1__AZV00229.1__pben1_p72__00071
Bact-VirMK291441.1__AZV00229.1__pben1_p72__00071
Identity
- Accession:
- MK291441 ↗
- Kingdom:
- phage
Quality
84.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-58
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.75 | 59.0 | 5.85e-01 | 100.0% | 82.0% |
| 1vziA01 | 2.20.28.100 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Desulphoferrodoxin, N-terminal domain | 0.75 | 51.0 | 5.49e-01 | 100.0% | 89.5% |
| 1dfxA00 | 2.60.40.730 | Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain | 0.74 | 51.0 | 3.73e-01 | 100.0% | 27.2% |
| 4tpuA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.73 | 52.0 | 5.69e-01 | 97.9% | 94.6% |
| 3d4rE01 | 2.40.128.400 | Mainly Beta › Beta Barrel › Lipocalin › | 0.72 | 42.0 | 3.45e-01 | 100.0% | 32.1% |
| 1yuzA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.72 | 49.0 | 5.28e-01 | 97.9% | 89.5% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.67 | 52.0 | 4.73e-01 | 100.0% | 62.1% |
| 6nw1A00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.62 | 52.0 | 5.30e-01 | 100.0% | 100.0% |
| 7kmfJ01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.62 | 47.0 | 3.31e-01 | 100.0% | 25.3% |
| 2d8bA01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.61 | 42.0 | 3.07e-01 | 72.3% | 54.3% |
| 2ff4A03 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.60 | 52.0 | 4.14e-01 | 100.0% | 93.9% |
| 3g7sA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.60 | 44.0 | 2.59e-01 | 83.0% | 15.2% |
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.60 | 50.0 | 5.06e-01 | 100.0% | 97.9% |
| 6hj2A00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.55 | 39.0 | 2.47e-01 | 76.6% | 66.8% |
| 3d00A02 | 3.30.60.80 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.55 | 32.0 | 3.64e-01 | 80.9% | 80.0% |
| 5eo9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 46.0 | 3.66e-01 | 100.0% | 52.3% |
| 2qyzA01 | 3.30.1490.160 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ctc02137 like domains | 0.52 | 45.0 | 4.37e-01 | 100.0% | 88.7% |
| 3u83A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.24e-01 | 95.7% | 83.5% |
| 2m2dA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.16e-01 | 95.7% | 76.3% |
| 4gjtC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.16e-01 | 95.7% | 83.0% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4021767 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.84 | 65.0 | 6.96e-01 | 100.0% | 97.5% |
| 3415761 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.83 | 62.0 | 6.10e-01 | 100.0% | 76.0% |
| 4666101 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 56.0 | 5.76e-01 | 100.0% | 77.8% |
| 5048049 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 58.0 | 6.20e-01 | 100.0% | 92.5% |
| 2543587 | 375.1.1.48 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF35_N | 0.78 | 51.0 | 5.73e-01 | 100.0% | 94.1% |
| 4322207 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 54.0 | 6.02e-01 | 95.7% | 100.0% |
| 4953501 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 57.0 | 6.08e-01 | 100.0% | 95.0% |
| 5044308 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.77 | 64.0 | 3.58e-01 | 100.0% | 7.5% |
| 5036844 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 49.0 | 5.07e-01 | 100.0% | 68.9% |
| 4175643 | 375.5.1.1 ↗ | few secondary structure elements › Rubredoxin-like › NOB1 zinc finger-like › NOB1 zinc finger-like › NOB1_Zn_bind | 0.76 | 52.0 | 4.39e-01 | 100.0% | 44.0% |
| 3277720 | 375.1.1.185 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 | 0.75 | 55.0 | 5.86e-01 | 100.0% | 95.0% |
| 5056189 | 375.1.1.77 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4379 | 0.75 | 55.0 | 5.83e-01 | 100.0% | 92.5% |
| 5066701 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 55.0 | 5.91e-01 | 100.0% | 100.0% |
| 3598330 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 56.0 | 3.92e-01 | 100.0% | 26.2% |
| 4993851 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 53.0 | 5.47e-01 | 100.0% | 88.9% |
| 2507149 | 375.1.1.48 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF35_N | 0.70 | 47.0 | 5.31e-01 | 100.0% | 97.1% |
| 3988227 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.69 | 56.0 | 5.69e-01 | 100.0% | 93.3% |
| 4836960 | 375.5.1.1 ↗ | few secondary structure elements › Rubredoxin-like › NOB1 zinc finger-like › NOB1 zinc finger-like › NOB1_Zn_bind | 0.69 | 51.0 | 4.53e-01 | 100.0% | 53.5% |
| 4885913 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.69 | 55.0 | 5.67e-01 | 100.0% | 93.3% |
| 5015962 | 375.1.1.64 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RUBY_RBDX | 0.67 | 48.0 | 4.80e-01 | 100.0% | 74.0% |
| 3206604 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 46.0 | 5.09e-01 | 100.0% | 97.1% |
| 4938122 | 375.1.1.22 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DNA_RNApol_7kD | 0.67 | 48.0 | 4.93e-01 | 97.9% | 80.0% |
| 3898196 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 59.0 | 5.60e-01 | 100.0% | 96.4% |
| 5065401 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.66 | 53.0 | 2.99e-01 | 100.0% | 6.9% |
| 4982450 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.66 | 51.0 | 3.90e-01 | 100.0% | 35.0% |
| 3601743 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.65 | 57.0 | 3.26e-01 | 100.0% | 10.9% |
| 4526174 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 54.0 | 5.49e-01 | 97.9% | 97.8% |
| 4163860 | 375.1.1.199 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MJ0401 | 0.65 | 54.0 | 5.53e-01 | 97.9% | 97.8% |
| 4019144 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 55.0 | 5.68e-01 | 95.7% | 100.0% |
| 4927454 | 386.1.1.418 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-FPG_IleRS | 0.64 | 54.0 | 5.48e-01 | 100.0% | 100.0% |
| 3263784 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 51.0 | 3.44e-01 | 100.0% | 23.4% |
| 4996063 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 54.0 | 4.79e-01 | 100.0% | 69.2% |
| 3716195 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.61 | 52.0 | 3.75e-01 | 100.0% | 78.0% |
| 3974544 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 50.0 | 4.77e-01 | 93.6% | 100.0% |
| 3980811 | 375.1.1.60 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PriA_CRR | 0.60 | 51.0 | 4.82e-01 | 100.0% | 100.0% |
| 4289796 | 375.1.1.60 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PriA_CRR | 0.60 | 52.0 | 4.71e-01 | 100.0% | 95.4% |
| 8005 | 375.1.1.57 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Vps36-NZF-N | 0.60 | 50.0 | 5.06e-01 | 100.0% | 97.9% |
| 4056467 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 51.0 | 4.74e-01 | 100.0% | 96.7% |
| 3702338 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 44.0 | 4.73e-01 | 97.9% | 95.0% |
| 3580567 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.59 | 49.0 | 4.02e-01 | 100.0% | 94.7% |
| 3243669 | 4076.2.1.0 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like | 0.59 | 44.0 | 4.18e-01 | 100.0% | 68.3% |
| 3218019 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.56 | 41.0 | 3.44e-01 | 100.0% | 44.7% |
| 3630611 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 40.0 | 3.48e-01 | 100.0% | 47.5% |
| 3998356 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 44.0 | 4.49e-01 | 100.0% | 95.6% |
| 3585680 | 386.1.1.25 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-H2C2_5 | 0.55 | 40.0 | 3.32e-01 | 100.0% | 42.2% |
| 3726900 | 11.1.1.642 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_Pom152_1 | 0.54 | 43.0 | 3.52e-01 | 100.0% | 55.5% |
| 3732023 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 43.0 | 3.56e-01 | 97.9% | 52.0% |
| 3397036 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.54 | 32.0 | 3.09e-01 | 80.9% | 49.1% |
| 3874886 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.52 | 42.0 | 3.16e-01 | 100.0% | 43.4% |
| 4180999 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 41.0 | 4.24e-01 | 100.0% | 95.6% |
| 3560776 | 386.1.1.133 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 | 0.50 | 30.0 | 2.93e-01 | 80.9% | 49.1% |