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MK291442.1__AZV00258.1__pkon1_p29__00029

Bact-Vir

MK291442.1__AZV00258.1__pkon1_p29__00029

Identity

Accession:
MK291442 ↗
Kingdom:
phage

Quality

81.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Paracoccus_phage_vB_PkoS_Pkon1

TaxID: 2500568

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 154-217
PDB
Domain cluster: rep: MK932884.1__QDF14853.1__X__00016__D187-239
D2 medium residues 1-112
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07120.18 best DUF1376 74.3 1.20e-20 77.7% 98.8%
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2nriB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 60.0 6.55e-01 76.8% 92.4%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 53.0 6.27e-01 70.5% 100.0%
3cdhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 46.0 4.32e-01 71.4% 53.7%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 51.0 5.57e-01 74.1% 90.4%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 45.0 4.36e-01 71.4% 58.9%
3fm5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 43.0 4.10e-01 71.4% 53.8%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 44.0 4.21e-01 72.3% 55.3%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 45.0 4.21e-01 71.4% 55.7%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.66 50.0 4.10e-01 80.4% 62.9%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 45.0 4.98e-01 70.5% 89.9%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 44.0 3.93e-01 70.5% 51.0%
1b9mB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 42.0 4.44e-01 73.2% 78.8%
3nrvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 4.22e-01 79.5% 64.3%
3c7jA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 39.0 4.33e-01 75.0% 92.3%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 47.0 4.42e-01 97.3% 79.6%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4957063 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 53.0 6.21e-01 80.4% 100.0%
4992883 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 52.0 5.96e-01 80.4% 92.9%
5035853 101.1.2.222 ↗ alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.74 52.0 5.53e-01 72.3% 88.0%
4929137 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 51.0 5.52e-01 70.5% 90.5%
4992785 101.1.2.222 ↗ alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.73 52.0 5.34e-01 72.3% 85.7%
5056718 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.72 52.0 5.13e-01 74.1% 72.9%
4598188 101.1.2.242 ↗ alpha arrays › HTH › HTH › winged helix domain › RepL 0.71 55.0 5.37e-01 82.1% 75.8%
3989015 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 53.0 5.50e-01 78.6% 90.5%
4982913 101.1.2.222 ↗ alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.70 49.0 4.98e-01 71.4% 79.1%
5001507 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 49.0 4.99e-01 75.0% 84.5%
4943504 101.1.2.877 ↗ alpha arrays › HTH › HTH › winged helix domain › BpsA_C 0.67 48.0 5.25e-01 73.2% 96.7%
3342447 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 57.0 3.38e-01 92.0% 96.4%
5018202 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 47.0 4.72e-01 74.1% 72.2%
4993103 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 45.0 4.66e-01 70.5% 79.0%
5041478 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 45.0 5.29e-01 75.9% 100.0%
4992657 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 45.0 3.46e-01 71.4% 34.5%
4202521 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 3.24e-01 86.6% 72.1%
5039088 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.52 42.0 3.95e-01 91.1% 69.7%