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MK291442.1__AZV00273.1__pkon1_p44__00044

Bact-Vir

MK291442.1__AZV00273.1__pkon1_p44__00044

Identity

Accession:
MK291442 ↗
Kingdom:
phage

Quality

93.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Paracoccus_phage_vB_PkoS_Pkon1

TaxID: 2500568

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-77
PDB
Domain cluster: rep: MF001358.1__ASZ76771.1__X__00105__D7-99
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05016.22 best ParE_toxin 25.6 2.10e-05 98.7% 93.3%
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kheA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.87 81.0 7.64e-01 100.0% 89.9%
3g5oC00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.87 81.0 7.68e-01 100.0% 88.5%
7bwfA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.86 79.0 7.51e-01 100.0% 94.3%
4ml0B00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.85 78.0 7.33e-01 100.0% 91.1%
2kc8A00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.83 77.0 7.08e-01 100.0% 81.1%
3bpqD00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.83 75.0 7.18e-01 98.7% 89.5%
5cw7B00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.83 77.0 7.07e-01 100.0% 89.4%
1itvA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.69 43.0 3.12e-01 100.0% 24.1%
3lp9A00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.68 46.0 3.23e-01 100.0% 22.9%
1jofA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 44.0 2.78e-01 72.0% 18.9%
2vrwB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 46.0 3.97e-01 100.0% 49.6%
4xpmB00 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.62 45.0 4.72e-01 100.0% 86.6%
1g3pA01 2.30.27.10 Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain 0.58 40.0 3.85e-01 88.0% 62.5%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 50.0 4.06e-01 100.0% 81.2%
2wiqA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.56 48.0 3.51e-01 100.0% 48.4%
4hz9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 49.0 4.17e-01 100.0% 69.9%
3ai4A00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.53 46.0 3.24e-01 100.0% 43.4%
3akoC00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.53 46.0 3.76e-01 100.0% 74.5%
3kztA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 45.0 3.80e-01 98.7% 62.9%
1pjzA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 44.0 3.32e-01 97.3% 97.5%
6az1g01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 42.0 2.88e-01 92.0% 99.7%
2h8gA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.52 38.0 2.75e-01 81.3% 35.4%
3nvoA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.51 38.0 3.29e-01 82.7% 51.1%
1m3qA01 3.30.310.40 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.51 38.0 3.66e-01 94.7% 67.4%
4i9xA00 2.60.40.3790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 42.0 3.31e-01 98.7% 63.1%
4ydeB00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.51 37.0 2.41e-01 81.3% 73.2%
3kspA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 45.0 3.76e-01 100.0% 88.4%
3ek7A01 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.50 43.0 3.07e-01 100.0% 44.9%
1y4oA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.50 42.0 3.82e-01 96.0% 86.5%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5007067 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.95 91.0 8.44e-01 100.0% 93.3%
5080337 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.93 89.0 8.29e-01 100.0% 86.5%
4999510 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.93 89.0 8.43e-01 100.0% 90.6%
5018712 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.92 88.0 8.14e-01 100.0% 90.0%
5014619 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.92 87.0 8.55e-01 100.0% 93.8%
4937019 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.92 87.0 8.11e-01 100.0% 91.1%
4928181 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.92 87.0 8.23e-01 100.0% 87.1%
4949569 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.92 88.0 8.16e-01 100.0% 85.6%
5014147 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.92 87.0 8.49e-01 100.0% 96.2%
5080208 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.92 86.0 8.05e-01 100.0% 87.8%
4937462 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.91 86.0 7.82e-01 100.0% 89.5%
4941220 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.91 85.0 8.32e-01 100.0% 92.5%
5080427 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.91 85.0 8.28e-01 100.0% 92.5%
5063859 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.90 86.0 8.37e-01 100.0% 95.0%
5030204 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.90 82.0 8.28e-01 98.7% 96.0%
4938029 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.90 85.0 7.67e-01 100.0% 84.7%
3945861 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.90 85.0 7.90e-01 100.0% 86.7%
4937857 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.90 84.0 8.21e-01 100.0% 92.5%
5044967 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.90 85.0 7.88e-01 100.0% 88.9%
4937737 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.89 84.0 8.04e-01 100.0% 95.3%
4966797 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.89 84.0 8.02e-01 100.0% 91.8%
4968316 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.89 84.0 7.88e-01 100.0% 88.6%
5031617 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.89 83.0 8.11e-01 98.7% 97.5%
3278218 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.89 83.0 7.71e-01 98.7% 93.3%
4940748 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.89 80.0 7.73e-01 100.0% 86.7%
5075086 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.88 82.0 8.03e-01 100.0% 92.5%
4937366 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.88 83.0 7.55e-01 100.0% 83.2%
4966674 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.88 84.0 7.96e-01 100.0% 88.2%
4966983 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.88 82.0 8.07e-01 100.0% 97.5%
3948814 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.88 82.0 7.20e-01 100.0% 75.2%
5027803 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.88 82.0 7.98e-01 100.0% 92.5%
4959351 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.88 80.0 7.79e-01 100.0% 90.0%
4962176 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.87 82.0 8.00e-01 100.0% 97.5%
4968774 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.86 81.0 8.11e-01 98.7% 98.7%
4937762 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.86 80.0 7.46e-01 100.0% 90.0%
4585524 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.86 80.0 7.50e-01 100.0% 94.4%
2966315 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.86 80.0 7.32e-01 100.0% 89.5%
4887373 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.85 80.0 7.84e-01 100.0% 97.5%
4463632 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.85 80.0 7.43e-01 100.0% 94.4%
3986903 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.85 78.0 7.49e-01 98.7% 98.8%
4646165 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.84 79.0 7.34e-01 100.0% 92.2%
4984297 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.84 78.0 7.27e-01 100.0% 86.7%
4966645 4312.1.1.15 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.84 68.0 7.10e-01 100.0% 94.2%
134040 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.83 77.0 7.08e-01 100.0% 81.1%
169853 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.83 75.0 7.20e-01 98.7% 89.4%
2770566 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.82 76.0 7.03e-01 100.0% 93.5%
3982278 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.82 72.0 6.75e-01 94.7% 88.9%
5029970 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.81 75.0 6.79e-01 100.0% 76.8%
5061645 4312.1.1.15 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.81 63.0 6.80e-01 98.7% 98.4%
4968449 4312.1.1.15 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.80 64.0 6.82e-01 98.7% 98.5%
5061910 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.78 68.0 6.88e-01 97.3% 96.0%
3964028 4312.2.1.1 ↗ a+b two layers › RelE-like › YaeB-like › YaeB-like › TrmO_C 0.74 60.0 6.09e-01 100.0% 88.0%
3526903 4312.2.1.0 ↗ a+b two layers › RelE-like › YaeB-like › YaeB-like 0.72 65.0 5.91e-01 100.0% 85.9%
3615586 5.1.4.36 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.71 46.0 2.83e-01 81.3% 11.9%
3276550 4312.2.1.0 ↗ a+b two layers › RelE-like › YaeB-like › YaeB-like 0.70 64.0 5.92e-01 100.0% 94.6%
5042309 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.67 59.0 5.58e-01 100.0% 82.2%
3273591 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.66 46.0 3.88e-01 100.0% 42.3%
3477246 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.63 50.0 4.06e-01 100.0% 45.7%
3266642 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 47.0 3.70e-01 100.0% 38.1%
3627627 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.63 47.0 3.81e-01 100.0% 41.4%
3774600 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.61 48.0 3.70e-01 100.0% 38.7%
164520 5.1.3.38 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mala_s_1-like 0.58 43.0 2.82e-01 100.0% 17.4%
3268037 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 48.0 3.76e-01 100.0% 44.5%
3275991 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 47.0 3.96e-01 100.0% 53.3%
3272565 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 48.0 3.09e-01 100.0% 27.2%
3259368 5.1.11.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.55 49.0 3.01e-01 100.0% 27.6%
4031368 3264.1.1.0 ↗ 0.54 41.0 3.35e-01 82.7% 42.8%
5000881 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 44.0 3.60e-01 97.3% 62.6%
5053431 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.52 39.0 3.14e-01 80.0% 78.7%
310184 5.1.4.25 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Me-amine-dh_H 0.51 44.0 2.76e-01 92.0% 84.3%