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MK291443.1__AZV00326.1__psul1_p18__00018

Bact-Vir

MK291443.1__AZV00326.1__psul1_p18__00018

Identity

Accession:
MK291443 ↗
Kingdom:
phage

Quality

85.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Paracoccus_phage_vB_PsuS_Psul1

TaxID: 2500569

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-54
PDB
Domain cluster: rep: MZ127829.1__QVJ07664.1__X__00010__D3-48
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hinA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.86 76.0 7.02e-01 100.0% 77.3%
1rzsA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.86 72.0 6.81e-01 98.1% 78.7%
3bd1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.83 72.0 6.67e-01 100.0% 76.9%
2auwB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.83 72.0 6.55e-01 98.1% 77.1%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 66.0 6.14e-01 92.3% 75.8%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 66.0 6.10e-01 92.3% 75.8%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 65.0 5.71e-01 92.3% 68.4%
2xcjA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 69.0 5.81e-01 100.0% 59.5%
3pxpA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 66.0 5.42e-01 92.3% 61.3%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 64.0 5.47e-01 92.3% 58.8%
7xi5A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 63.0 6.37e-01 90.4% 96.1%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 63.0 5.51e-01 92.3% 65.4%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 63.0 5.93e-01 92.3% 77.8%
4ybaA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 65.0 5.79e-01 100.0% 71.4%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 61.0 4.94e-01 92.3% 49.5%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 60.0 5.39e-01 92.3% 68.4%
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 61.0 5.38e-01 92.3% 64.9%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 62.0 5.66e-01 92.3% 72.1%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 64.0 6.13e-01 100.0% 83.3%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 56.0 4.76e-01 92.3% 50.0%
2l49B01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 62.0 6.18e-01 100.0% 94.3%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 60.0 5.39e-01 94.2% 73.7%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 58.0 5.48e-01 92.3% 80.0%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 61.0 5.72e-01 100.0% 75.8%
2ppxA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 60.0 5.82e-01 98.1% 90.2%
4ghjB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 60.0 5.29e-01 92.3% 63.2%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 59.0 5.24e-01 92.3% 65.3%
2cw1A00 3.30.240.10 Alpha Beta › 2-Layer Sandwich › CRO Repressor › CRO Repressor 0.71 54.0 5.11e-01 96.2% 67.7%
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 54.0 5.00e-01 92.3% 73.2%
1u9lB00 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.68 58.0 5.26e-01 96.2% 98.6%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 55.0 5.02e-01 92.3% 69.4%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 56.0 5.32e-01 100.0% 90.8%
1ic8A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 54.0 4.64e-01 100.0% 59.6%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 49.0 4.13e-01 84.6% 80.0%
3qdnA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 39.0 3.32e-01 71.2% 39.3%
1nvmA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.62 42.0 3.92e-01 71.2% 70.3%
3oc2A01 3.90.1310.10 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) 0.62 52.0 3.70e-01 100.0% 32.9%
1vpwA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 44.0 4.34e-01 80.8% 70.2%
3h5qA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.59 40.0 3.68e-01 71.2% 52.9%
2ib1A00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.58 47.0 4.08e-01 100.0% 72.5%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 44.0 3.73e-01 84.6% 81.8%
1ma1A01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.57 38.0 3.63e-01 71.2% 60.9%
5yc9B01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.57 43.0 3.61e-01 98.1% 46.4%
2ltuA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.57 45.0 4.36e-01 96.2% 82.3%
2kz5A00 1.10.880.10 Mainly Alpha › Orthogonal Bundle › Transcription Factor Skn-1; Chain P › Transcription factor, Skn-1-like, DNA-binding domain 0.56 39.0 3.28e-01 75.0% 58.2%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.55 46.0 4.29e-01 98.1% 79.1%
2uyyA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.55 42.0 3.26e-01 86.5% 67.5%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.54 44.0 4.08e-01 98.1% 70.8%
4mhlA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.54 36.0 2.61e-01 71.2% 61.5%
1bh9B00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.52 38.0 3.21e-01 100.0% 46.1%
5je8B02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.52 39.0 3.03e-01 84.6% 66.4%
8sfuA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 42.0 3.15e-01 98.1% 94.2%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
164935 101.1.4.21 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › P22_Cro 0.86 76.0 7.02e-01 100.0% 77.3%
3963750 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.84 70.0 6.06e-01 92.3% 75.0%
3164312 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.83 69.0 5.95e-01 92.3% 61.3%
4935348 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 68.0 5.95e-01 98.1% 70.0%
5052156 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.79 69.0 6.61e-01 98.1% 91.7%
4004322 101.1.4.24 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › YdaS_toxin 0.79 70.0 6.12e-01 100.0% 68.0%
3985012 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 63.0 5.68e-01 92.3% 69.3%
3965656 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 65.0 5.65e-01 92.3% 61.3%
4008003 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.78 69.0 5.96e-01 100.0% 87.5%
3605903 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.78 68.0 5.81e-01 100.0% 67.1%
4933148 101.1.4.96 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › PolC_DP2_central 0.78 63.0 5.33e-01 92.3% 60.0%
3963744 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.77 63.0 5.52e-01 92.3% 66.3%
4173167 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.77 68.0 6.38e-01 100.0% 80.0%
3980119 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 63.0 5.78e-01 92.3% 70.0%
4008375 101.1.4.21 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › P22_Cro 0.77 65.0 5.95e-01 100.0% 71.4%
3947329 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 63.0 5.92e-01 92.3% 75.4%
4971248 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 66.0 6.02e-01 100.0% 81.4%
3970029 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.76 63.0 5.47e-01 92.3% 61.3%
3982350 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 61.0 5.61e-01 92.3% 70.0%
5028456 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.76 60.0 5.29e-01 90.4% 60.0%
5039762 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 61.0 5.10e-01 92.3% 51.6%
2766 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 63.0 5.93e-01 92.3% 77.8%
5015485 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.75 62.0 5.89e-01 98.1% 84.6%
3699551 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.75 64.0 5.65e-01 100.0% 71.2%
3589516 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.75 60.0 5.58e-01 94.2% 75.7%
5007716 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 61.0 5.62e-01 96.2% 77.1%
4425759 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 64.0 5.00e-01 100.0% 45.5%
3285904 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.74 61.0 5.03e-01 92.3% 51.6%
4945219 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.74 62.0 5.91e-01 92.3% 80.0%
3602378 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 62.0 5.84e-01 98.1% 83.1%
3965598 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.74 61.0 5.57e-01 94.2% 74.3%
2389360 101.1.4.24 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › YdaS_toxin 0.74 59.0 5.52e-01 90.4% 72.3%
3589834 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.73 63.0 5.90e-01 100.0% 86.2%
4031147 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.73 60.0 5.79e-01 94.2% 88.3%
4159770 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 65.0 5.75e-01 100.0% 86.7%
3278834 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 59.0 5.42e-01 92.3% 71.4%
4952242 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.72 59.0 5.40e-01 92.3% 71.4%
4994602 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 60.0 5.75e-01 96.2% 91.7%
2791 101.1.4.20 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.72 58.0 4.98e-01 94.2% 59.6%
4970801 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 62.0 5.32e-01 100.0% 61.2%
3166016 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.71 59.0 5.76e-01 100.0% 98.3%
3952322 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.71 60.0 4.87e-01 100.0% 51.4%
4034513 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 57.0 5.48e-01 92.3% 81.7%
3953342 101.1.4.61 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › PF27182 0.70 57.0 4.21e-01 90.4% 37.8%
4967965 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 56.0 5.13e-01 92.3% 74.3%
3392566 3929.1.1.2 ↗ alpha bundles › THO1 C-terminal domain › THO1 C-terminal domain › THO1 C-terminal domain › DUF7084 0.69 53.0 5.51e-01 84.6% 91.7%
3587013 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.69 60.0 5.81e-01 100.0% 90.0%
5037780 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.68 57.0 5.08e-01 100.0% 71.2%
4004379 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.68 57.0 5.28e-01 100.0% 80.0%
4034109 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.68 57.0 5.42e-01 100.0% 87.7%
4022186 101.1.4.58 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF7726 0.67 56.0 5.40e-01 98.1% 100.0%
4031257 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.67 55.0 5.30e-01 100.0% 88.9%
4114937 101.1.4.5 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HNF-1_N 0.66 53.0 4.34e-01 100.0% 52.2%
3958941 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.64 54.0 4.80e-01 100.0% 65.0%
3588628 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.62 50.0 4.97e-01 100.0% 98.3%
3587532 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.62 49.0 4.87e-01 96.2% 100.0%
3587817 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.61 52.0 5.03e-01 100.0% 91.7%
3414131 108.2.1.1 ↗ alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins › PBP_GOBP 0.59 45.0 3.80e-01 88.5% 48.9%
5015850 205.1.1.1 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.58 51.0 3.73e-01 100.0% 53.4%
3222360 103.1.1.21 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › AMPK_alpha_AID 0.57 42.0 4.35e-01 84.6% 100.0%
3341256 109.3.1.137 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF3490 0.51 39.0 3.88e-01 98.1% 86.7%