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MK291443.1__AZV00332.1__psul1_p24__00024

Bact-Vir

MK291443.1__AZV00332.1__psul1_p24__00024

Identity

Accession:
MK291443 ↗
Kingdom:
phage

Quality

83.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Paracoccus_phage_vB_PsuS_Psul1

TaxID: 2500569

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-79
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3aonA00 1.10.287.3240 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 41.0 3.09e-01 79.7% 31.4%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3633537 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.51 44.0 3.58e-01 94.9% 71.0%
4230774 101.1.9.117 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_assoc 0.50 33.0 3.18e-01 96.2% 55.8%
D2 medium residues 80-121_148-232
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.65 36.0 4.08e-01 97.6% 71.3%
3fm9A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 33.0 3.99e-01 77.2% 92.3%
2hszA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.53 32.0 3.88e-01 76.4% 98.7%
4f0uA00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.53 38.0 3.58e-01 74.8% 76.2%
3fnrA01 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.52 36.0 3.50e-01 99.2% 62.8%
4mhlA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.52 31.0 2.87e-01 92.9% 45.3%
1eq1A00 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.52 41.0 3.84e-01 86.6% 88.0%
1i5nB00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.52 35.0 3.56e-01 98.4% 70.2%
1g71A02 1.10.8.160 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › DNA primase S; domain 2 0.50 33.0 3.57e-01 100.0% 79.6%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4034281 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 51.0 5.48e-01 87.4% 96.4%
3441434 188.1.1.4 ↗ alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › PF28741 0.52 37.0 3.19e-01 73.2% 64.4%
3719715 3345.1.1.0 ↗ alpha arrays › MRG domain › MRG domain › MRG domain 0.52 45.0 4.14e-01 95.3% 95.8%
5074733 140.1.1.7 ↗ alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 0.52 39.0 3.80e-01 96.9% 72.1%