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MK291443.1__AZV00363.1__psul1_p55__00055
Bact-VirMK291443.1__AZV00363.1__psul1_p55__00055
Identity
- Accession:
- MK291443 ↗
- Kingdom:
- phage
Quality
69.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 103-162
Domain cluster:
representative
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qsdA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.76 | 59.0 | 5.72e-01 | 83.3% | 80.6% |
| 2zaiA04 | 2.60.40.3030 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.76 | 68.0 | 5.22e-01 | 100.0% | 68.9% |
| 3zoqC00 | 6.20.250.30 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.74 | 58.0 | 6.17e-01 | 91.7% | 98.1% |
| 2cyyA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.73 | 61.0 | 5.17e-01 | 90.0% | 86.3% |
| 4pcqA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.73 | 56.0 | 5.03e-01 | 83.3% | 95.2% |
| 3trgA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 58.0 | 5.02e-01 | 91.7% | 92.6% |
| 3i4pA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.69 | 53.0 | 4.76e-01 | 83.3% | 96.4% |
| 2gmhA02 | 3.30.9.90 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › | 0.68 | 60.0 | 4.16e-01 | 100.0% | 49.8% |
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.68 | 56.0 | 5.62e-01 | 91.7% | 90.0% |
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.68 | 57.0 | 5.45e-01 | 95.0% | 93.0% |
| 6u9hF02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.67 | 56.0 | 5.24e-01 | 98.3% | 100.0% |
| 3e0jB00 | 3.90.1030.20 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain | 0.66 | 58.0 | 4.43e-01 | 100.0% | 72.7% |
| 5e1qA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 49.0 | 4.23e-01 | 81.7% | 51.0% |
| 3rykA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 48.0 | 3.43e-01 | 86.7% | 26.9% |
| 4a18X01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.66 | 55.0 | 5.02e-01 | 91.7% | 92.4% |
| 4lejA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 47.0 | 3.44e-01 | 88.3% | 27.2% |
| 4oj3B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 56.0 | 4.85e-01 | 98.3% | 91.6% |
| 3u02A02 | 3.90.600.20 | Alpha Beta › Alpha-Beta Complex › Glycinamide Ribonucleotide Synthetase; Chain A, domain 4 › | 0.64 | 52.0 | 4.50e-01 | 90.0% | 96.8% |
| 3vtiA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 52.0 | 4.53e-01 | 95.0% | 85.4% |
| 2c4xA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 51.0 | 3.79e-01 | 90.0% | 59.6% |
| 2n99A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.63 | 50.0 | 4.73e-01 | 91.7% | 93.4% |
| 6p3xB01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.63 | 53.0 | 3.76e-01 | 93.3% | 42.9% |
| 1kbaA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.62 | 45.0 | 4.42e-01 | 88.3% | 71.2% |
| 3cp7B02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 49.0 | 4.10e-01 | 86.7% | 52.4% |
| 1hq6B00 | 3.50.20.10 | Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B | 0.62 | 52.0 | 3.57e-01 | 96.7% | 39.0% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 48.0 | 4.25e-01 | 86.7% | 87.8% |
| 4bluB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 46.0 | 3.02e-01 | 83.3% | 79.3% |
| 1uenA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 51.0 | 4.09e-01 | 95.0% | 47.2% |
| 1vioA03 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.61 | 48.0 | 4.42e-01 | 90.0% | 98.8% |
| 1a8mA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 47.0 | 3.67e-01 | 93.3% | 69.1% |
| 2zewB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 49.0 | 3.72e-01 | 93.3% | 59.9% |
| 5kfzA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.59 | 52.0 | 4.15e-01 | 100.0% | 56.1% |
| 1lfpA03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.59 | 49.0 | 4.67e-01 | 95.0% | 97.3% |
| 1ksiA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.59 | 50.0 | 2.98e-01 | 100.0% | 13.7% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.58 | 49.0 | 4.39e-01 | 93.3% | 97.6% |
| 2go8A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 47.0 | 4.37e-01 | 88.3% | 100.0% |
| 3isrA01 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.57 | 47.0 | 3.36e-01 | 91.7% | 71.4% |
| 2n59A00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 46.0 | 3.96e-01 | 91.7% | 57.4% |
| 1qg3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 47.0 | 4.00e-01 | 95.0% | 53.8% |
| 5u8rA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 49.0 | 4.10e-01 | 100.0% | 59.3% |
| 2byfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 46.0 | 3.94e-01 | 96.7% | 57.9% |
| 1d6uA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.56 | 46.0 | 2.80e-01 | 100.0% | 13.4% |
| 2mraA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.56 | 47.0 | 3.84e-01 | 96.7% | 53.8% |
| 3nkgA00 | 2.60.120.790 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 45.0 | 3.31e-01 | 91.7% | 34.7% |
| 1lkxA01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.55 | 40.0 | 2.72e-01 | 78.3% | 66.3% |
| 1vomA01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.55 | 37.0 | 2.38e-01 | 70.0% | 55.3% |
| 3pp2A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 40.0 | 3.33e-01 | 80.0% | 87.5% |
| 6heiA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 45.0 | 2.86e-01 | 93.3% | 84.1% |
| 3up6A02 | 2.60.40.3380 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 42.0 | 3.22e-01 | 88.3% | 48.1% |
| 6rptC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 3.71e-01 | 96.7% | 51.8% |
| 4gwmA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 45.0 | 3.39e-01 | 100.0% | 36.6% |
| 3rb5A02 | 2.60.40.2030 | Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain | 0.53 | 43.0 | 3.47e-01 | 91.7% | 44.0% |
| 1ex0A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 46.0 | 3.81e-01 | 100.0% | 59.6% |
| 1lr5B00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 41.0 | 3.10e-01 | 88.3% | 41.5% |
| 5xnrA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 39.0 | 3.19e-01 | 85.0% | 63.8% |
ECOD (81)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965010 | 3115.4.1.1 ↗ | a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 › DUF1543 | 0.78 | 66.0 | 5.78e-01 | 93.3% | 80.0% |
| 5046142 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.77 | 62.0 | 5.28e-01 | 86.7% | 92.6% |
| 223776 | 3115.4.1.1 ↗ | a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 › DUF1543 | 0.77 | 65.0 | 6.15e-01 | 93.3% | 87.3% |
| 5006179 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.76 | 63.0 | 5.59e-01 | 90.0% | 95.2% |
| 5063049 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.75 | 60.0 | 5.47e-01 | 86.7% | 97.5% |
| 4673268 | 3115.1.1.8 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Usg | 0.75 | 59.0 | 5.92e-01 | 85.0% | 96.7% |
| 5043890 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.74 | 60.0 | 5.36e-01 | 88.3% | 91.8% |
| 5065226 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.74 | 62.0 | 5.30e-01 | 91.7% | 89.5% |
| 4938113 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.74 | 59.0 | 5.40e-01 | 86.7% | 94.9% |
| 4534160 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.74 | 59.0 | 5.28e-01 | 88.3% | 92.9% |
| 5074517 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.73 | 61.0 | 5.27e-01 | 90.0% | 88.9% |
| 4929060 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.73 | 58.0 | 4.91e-01 | 86.7% | 79.0% |
| 5028911 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.73 | 61.0 | 5.31e-01 | 91.7% | 90.0% |
| 4933138 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.73 | 59.0 | 5.22e-01 | 88.3% | 92.9% |
| 5073262 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.73 | 59.0 | 5.13e-01 | 88.3% | 87.8% |
| 5058264 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.73 | 59.0 | 5.05e-01 | 88.3% | 93.6% |
| 3508212 | 3115.1.1.6 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 | 0.73 | 60.0 | 5.76e-01 | 91.7% | 90.0% |
| 5079777 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.72 | 60.0 | 5.44e-01 | 90.0% | 98.8% |
| 4933008 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.72 | 60.0 | 5.36e-01 | 91.7% | 94.1% |
| 5059015 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.72 | 58.0 | 5.11e-01 | 90.0% | 88.9% |
| 4926895 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.71 | 57.0 | 4.92e-01 | 88.3% | 82.1% |
| 3286753 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.71 | 59.0 | 4.93e-01 | 90.0% | 79.0% |
| 5065415 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.71 | 59.0 | 5.33e-01 | 90.0% | 98.8% |
| 4963330 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.71 | 57.0 | 5.21e-01 | 88.3% | 98.8% |
| 4929485 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.71 | 56.0 | 5.00e-01 | 86.7% | 91.8% |
| 4962129 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.70 | 59.0 | 5.03e-01 | 91.7% | 86.3% |
| 3338688 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.70 | 55.0 | 5.39e-01 | 85.0% | 100.0% |
| 4956291 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.70 | 56.0 | 4.90e-01 | 88.3% | 91.1% |
| 3551719 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.70 | 60.0 | 5.59e-01 | 95.0% | 90.7% |
| 4311079 | 304.4.1.20 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 | 0.70 | 55.0 | 4.74e-01 | 88.3% | 86.9% |
| 5033398 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.69 | 55.0 | 4.83e-01 | 86.7% | 90.0% |
| 5009749 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.69 | 61.0 | 5.31e-01 | 98.3% | 92.2% |
| 3989300 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.69 | 58.0 | 4.74e-01 | 93.3% | 57.3% |
| 5006368 | 304.4.1.20 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 | 0.68 | 55.0 | 4.96e-01 | 90.0% | 97.6% |
| 3929121 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 59.0 | 4.79e-01 | 98.3% | 90.4% |
| 3189293 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.68 | 61.0 | 5.13e-01 | 100.0% | 86.0% |
| 3686913 | 101.1.2.115 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDC27 | 0.68 | 60.0 | 4.48e-01 | 100.0% | 70.7% |
| 4984075 | 304.5.1.30 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › AsnC_trans_reg | 0.68 | 56.0 | 5.34e-01 | 93.3% | 100.0% |
| 3702557 | 3945.1.1.0 ↗ | alpha superhelices › N-terminal fragment of dynein heavy chain › N-terminal fragment of dynein heavy chain › N-terminal fragment of dynein heavy chain | 0.68 | 58.0 | 4.53e-01 | 96.7% | 49.2% |
| 5011417 | 304.4.1.20 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 | 0.68 | 56.0 | 4.92e-01 | 91.7% | 92.2% |
| 3406669 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 58.0 | 4.92e-01 | 96.7% | 87.0% |
| 4065099 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.67 | 53.0 | 4.62e-01 | 88.3% | 88.4% |
| 2794885 | 807.1.1.1 ↗ | a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD | 0.67 | 53.0 | 5.26e-01 | 88.3% | 96.9% |
| 4942869 | 303.1.1.1 ↗ | a+b four layers › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › PvlArgDC | 0.67 | 58.0 | 4.21e-01 | 98.3% | 84.7% |
| 2557261 | 807.1.1.1 ↗ | a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD | 0.66 | 53.0 | 4.68e-01 | 90.0% | 63.0% |
| 3396683 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.66 | 53.0 | 4.86e-01 | 88.3% | 70.9% |
| 2741079 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.66 | 58.0 | 5.53e-01 | 100.0% | 100.0% |
| 3399490 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.65 | 49.0 | 4.85e-01 | 88.3% | 76.9% |
| 3896560 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.65 | 55.0 | 4.07e-01 | 100.0% | 50.0% |
| 3775096 | 382.1.1.2 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP | 0.64 | 53.0 | 4.69e-01 | 93.3% | 84.4% |
| 3634674 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.64 | 54.0 | 3.38e-01 | 96.7% | 53.7% |
| 3631449 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.63 | 55.0 | 3.38e-01 | 100.0% | 20.1% |
| 3515326 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.62 | 53.0 | 4.11e-01 | 96.7% | 69.6% |
| 3214342 | 10.1.1.88 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › GBD_ELAPOR1 | 0.61 | 51.0 | 3.64e-01 | 93.3% | 55.7% |
| 4971633 | 4176.1.1.2 ↗ | a/b three-layered sandwiches › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › S-Me-THD_N | 0.61 | 49.0 | 3.36e-01 | 90.0% | 24.0% |
| 3405278 | 382.1.1.3 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Activin_recp | 0.61 | 50.0 | 4.36e-01 | 95.0% | 85.0% |
| 4384109 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.61 | 50.0 | 4.40e-01 | 93.3% | 61.4% |
| 3878947 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 50.0 | 4.49e-01 | 91.7% | 64.7% |
| 3543785 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 49.0 | 4.25e-01 | 90.0% | 56.8% |
| 4021112 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.61 | 52.0 | 3.46e-01 | 96.7% | 70.6% |
| 3275859 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 52.0 | 3.88e-01 | 100.0% | 37.6% |
| 3829376 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.60 | 51.0 | 3.88e-01 | 96.7% | 44.1% |
| 3798427 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.60 | 50.0 | 4.00e-01 | 96.7% | 76.8% |
| 3277288 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 51.0 | 4.01e-01 | 100.0% | 48.9% |
| 3824339 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 49.0 | 3.58e-01 | 93.3% | 37.6% |
| 3679804 | 207.1.1.365 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_8, Island, LRR_14 | 0.59 | 45.0 | 2.70e-01 | 86.7% | 10.4% |
| 3738953 | 11.1.1.644 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Pom152 | 0.58 | 48.0 | 3.83e-01 | 95.0% | 46.4% |
| 3591997 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 47.0 | 3.69e-01 | 93.3% | 43.1% |
| 5059000 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.56 | 42.0 | 3.66e-01 | 86.7% | 52.6% |
| 3517510 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.55 | 42.0 | 3.05e-01 | 86.7% | 99.0% |
| 4926801 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 46.0 | 3.63e-01 | 98.3% | 46.7% |
| 4333074 | 230.2.1.0 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C | 0.54 | 37.0 | 3.03e-01 | 73.3% | 91.4% |
| 3733410 | 2004.1.1.36 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N | 0.54 | 36.0 | 2.24e-01 | 70.0% | 54.8% |
| 3483320 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 45.0 | 3.68e-01 | 98.3% | 61.7% |
| 4427418 | 11.1.1.1229 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27268 | 0.54 | 46.0 | 4.04e-01 | 100.0% | 80.0% |
| 3520955 | 2006.1.3.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim | 0.53 | 43.0 | 2.93e-01 | 96.7% | 26.0% |
| 3230558 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.51 | 43.0 | 3.73e-01 | 98.3% | 94.0% |
| 5083247 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 3.55e-01 | 95.0% | 53.8% |
| 4438254 | 11.1.4.27 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › fn3_3 | 0.51 | 39.0 | 3.56e-01 | 91.7% | 60.0% |
| 3990833 | 382.1.1.13 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Ly-6_related | 0.51 | 40.0 | 3.58e-01 | 93.3% | 90.5% |
| 3491868 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.50 | 41.0 | 3.33e-01 | 100.0% | 50.4% |
D2
medium
residues 11-93
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m7nA03 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.76 | 32.0 | 4.76e-01 | 71.1% | 97.1% |
| 2riqA02 | 2.20.25.630 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.71 | 35.0 | 4.12e-01 | 75.9% | 66.7% |
| 2m6nA00 | 2.20.25.20 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.60 | 30.0 | 3.71e-01 | 73.5% | 80.4% |
| 5xpyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 33.0 | 3.05e-01 | 74.7% | 42.6% |
| 2jneA00 | 2.10.290.10 | Mainly Beta › Ribbon › Rubredoxin-like › YfgJ-like | 0.56 | 39.0 | 4.21e-01 | 73.5% | 98.6% |
| 2oap202 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 38.0 | 2.65e-01 | 77.1% | 88.4% |
| 2otmA00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.52 | 33.0 | 2.73e-01 | 75.9% | 36.4% |
| 2gtiA01 | 3.30.160.820 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Nsp15 N-terminal domain-like | 0.51 | 37.0 | 4.06e-01 | 79.5% | 98.4% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.50 | 32.0 | 3.71e-01 | 90.4% | 94.7% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5015586 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.78 | 33.0 | 4.20e-01 | 72.3% | 66.0% |
| 3676917 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 31.0 | 3.50e-01 | 73.5% | 47.7% |
| 3260584 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 32.0 | 4.29e-01 | 71.1% | 77.8% |
| 5044272 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.72 | 33.0 | 4.21e-01 | 71.1% | 74.0% |
| 3662922 | 375.1.1.148 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RPA_interact_C | 0.70 | 42.0 | 5.22e-01 | 80.7% | 100.0% |
| 3642979 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 32.0 | 3.34e-01 | 75.9% | 45.3% |
| 3683143 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 31.0 | 3.03e-01 | 75.9% | 36.2% |
| 3680043 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 30.0 | 2.69e-01 | 77.1% | 29.2% |
| 5047657 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 39.0 | 4.64e-01 | 78.3% | 90.9% |
| 4989457 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 38.0 | 4.60e-01 | 78.3% | 98.0% |
| 4944397 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 38.0 | 4.57e-01 | 77.1% | 100.0% |
| 4991612 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 43.0 | 4.63e-01 | 80.7% | 92.9% |
| 4992470 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.58 | 33.0 | 3.75e-01 | 74.7% | 75.0% |
| 3595410 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.57 | 42.0 | 2.80e-01 | 80.7% | 27.7% |
| 4959480 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.56 | 33.0 | 3.79e-01 | 75.9% | 80.0% |
| 4989374 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.55 | 31.0 | 3.12e-01 | 80.7% | 52.9% |
| 4944961 | 4121.1.1.19 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › PF27230 | 0.54 | 45.0 | 3.06e-01 | 98.8% | 94.8% |
| 4995072 | 101.41.1.0 ↗ | alpha arrays › HTH › MRB1590 C-terminal domain › MRB1590 C-terminal domain | 0.53 | 37.0 | 3.51e-01 | 84.3% | 60.0% |
| 5046853 | 375.1.2.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Desulforedoxin | 0.53 | 29.0 | 3.71e-01 | 71.1% | 97.8% |
| 3926363 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 35.0 | 3.22e-01 | 83.1% | 49.6% |
| 4040104 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.52 | 39.0 | 2.89e-01 | 80.7% | 80.0% |
| 4562142 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.51 | 35.0 | 2.35e-01 | 71.1% | 88.3% |
| 3191658 | 633.23.1.9 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 | 0.51 | 39.0 | 2.95e-01 | 83.1% | 80.0% |
| 3298607 | 220.1.1.10 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SSrecog | 0.50 | 35.0 | 3.28e-01 | 72.3% | 63.8% |