←Back to structures
MK291444.1__AZV00369.1__pthi1_p04__00004
Bact-VirMK291444.1__AZV00369.1__pthi1_p04__00004
Identity
- Accession:
- MK291444 ↗
- Kingdom:
- phage
Quality
86.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-76
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b9lA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.63 | 43.0 | 3.55e-01 | 70.6% | 82.4% |
| 3b8pA00 | 3.30.1890.10 | Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like | 0.59 | 44.0 | 3.18e-01 | 83.8% | 27.1% |
| 1lqlA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.58 | 40.0 | 3.56e-01 | 73.5% | 89.3% |
| 2avxA00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.57 | 47.0 | 3.62e-01 | 95.6% | 48.0% |
| 6cc0A01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.56 | 47.0 | 3.59e-01 | 94.1% | 50.0% |
| 5l10B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.55 | 46.0 | 3.50e-01 | 95.6% | 48.2% |
| 3m05B01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 38.0 | 3.54e-01 | 75.0% | 87.0% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 39.0 | 3.47e-01 | 77.9% | 75.8% |
| 5mmjj00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.53 | 38.0 | 3.40e-01 | 76.5% | 86.9% |
| 2fh5B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 44.0 | 3.27e-01 | 95.6% | 76.1% |
| 2a74A06 | 6.20.50.160 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.52 | 34.0 | 3.54e-01 | 76.5% | 71.9% |
| 3up9A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 39.0 | 3.19e-01 | 83.8% | 79.0% |
| 3w1hA01 | 3.90.1150.110 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.52 | 40.0 | 3.01e-01 | 88.2% | 41.8% |
| 5kfzA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.52 | 38.0 | 3.16e-01 | 79.4% | 53.7% |
| 3ihlB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 42.0 | 3.08e-01 | 100.0% | 56.3% |
| 5ib9A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 42.0 | 2.92e-01 | 98.5% | 41.4% |
| 2xefA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 41.0 | 2.75e-01 | 95.6% | 68.5% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3829017 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.65 | 48.0 | 4.69e-01 | 92.6% | 73.3% |
| 3816149 | 263.1.1.0 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like | 0.59 | 45.0 | 4.33e-01 | 86.8% | 73.1% |
| 3693380 | 2003.1.1.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored | 0.57 | 44.0 | 3.18e-01 | 86.8% | 28.8% |
| 5060353 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.57 | 48.0 | 3.52e-01 | 98.5% | 78.0% |
| 3262355 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.57 | 42.0 | 3.89e-01 | 94.1% | 60.2% |
| 3714160 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.57 | 41.0 | 3.78e-01 | 77.9% | 64.4% |
| 3933064 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.56 | 39.0 | 2.53e-01 | 82.4% | 16.6% |
| 3504151 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.56 | 46.0 | 3.01e-01 | 94.1% | 41.0% |
| 3426557 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.56 | 40.0 | 2.42e-01 | 100.0% | 10.9% |
| 3595211 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.56 | 41.0 | 3.80e-01 | 77.9% | 68.2% |
| 4022277 | 328.1.1.3 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 | 0.55 | 40.0 | 3.46e-01 | 91.2% | 47.8% |
| 5048466 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 43.0 | 3.40e-01 | 95.6% | 43.6% |
| 4976198 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.52 | 36.0 | 3.33e-01 | 70.6% | 56.5% |
| 5385 | 304.58.1.0 ↗ | a+b two layers › Alpha-beta plaits › FepE-like › FepE-like | 0.52 | 41.0 | 3.17e-01 | 88.2% | 37.3% |
| 3597121 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 40.0 | 2.79e-01 | 94.1% | 69.2% |
| 4329174 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.51 | 41.0 | 3.26e-01 | 97.1% | 58.8% |
| 4582665 | 140.1.1.6 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1,tRNA-synt_1g | 0.51 | 42.0 | 2.93e-01 | 98.5% | 55.6% |