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MK291444.1__AZV00409.1__pthi1_p44__00044
Bact-VirMK291444.1__AZV00409.1__pthi1_p44__00044
Identity
- Accession:
- MK291444 ↗
- Kingdom:
- phage
Quality
70.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 144-245
Domain cluster:
rep: MW824397.1__QZI91684.1__PODOV088v1_p0023__00023__D41-137
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2eqsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 45.0 | 4.73e-01 | 70.6% | 92.1% |
| 4qmgA02 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 45.0 | 4.06e-01 | 74.5% | 85.4% |
| 2k52A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 43.0 | 4.90e-01 | 70.6% | 97.3% |
| 2nn6I02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 47.0 | 4.37e-01 | 79.4% | 98.4% |
| 1luzA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 43.0 | 4.63e-01 | 70.6% | 92.9% |
| 4b9wA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 47.0 | 4.69e-01 | 82.4% | 88.9% |
| 1kl9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 42.0 | 4.80e-01 | 75.5% | 98.7% |
| 2ahoB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 45.0 | 4.96e-01 | 91.2% | 100.0% |
| 1nnxA00 | 2.40.50.200 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Bacterial OB-fold | 0.60 | 46.0 | 4.78e-01 | 95.1% | 88.2% |
| 3psiA06 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 43.0 | 4.36e-01 | 76.5% | 83.0% |
| 3k0xA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 42.0 | 4.35e-01 | 95.1% | 77.8% |
| 3aqqA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 40.0 | 4.09e-01 | 70.6% | 84.8% |
| 4xzjA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.56 | 46.0 | 3.65e-01 | 88.2% | 70.6% |
| 2bw8A00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.55 | 43.0 | 3.40e-01 | 85.3% | 78.3% |
| 5tk2B00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.55 | 37.0 | 3.95e-01 | 89.2% | 80.7% |
| 1g9mG00 | 2.170.40.20 | Mainly Beta › Beta Complex › HIV Envelope Protein Gp120; Chain G › Human immunodeficiency virus 1, Gp160, envelope glycoprotein | 0.55 | 45.0 | 3.31e-01 | 93.1% | 89.5% |
| 3ammA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.53 | 42.0 | 3.26e-01 | 88.2% | 82.4% |
| 2ci8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 28.0 | 3.46e-01 | 95.1% | 89.3% |
| 2jemA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.53 | 41.0 | 3.27e-01 | 86.3% | 83.6% |
| 3vgiA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.53 | 41.0 | 3.16e-01 | 87.3% | 77.8% |
| 6tnyB02 | 2.40.50.430 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 43.0 | 4.17e-01 | 90.2% | 94.6% |
| 8c5yA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 44.0 | 3.76e-01 | 95.1% | 89.4% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4658121 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.71 | 45.0 | 5.40e-01 | 74.5% | 100.0% |
| 5040373 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 43.0 | 5.02e-01 | 93.1% | 90.0% |
| 4957662 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.70 | 44.0 | 5.12e-01 | 73.5% | 91.4% |
| 5073041 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 45.0 | 5.03e-01 | 93.1% | 87.5% |
| 4424090 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 45.0 | 5.15e-01 | 70.6% | 94.7% |
| 3391557 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.64 | 43.0 | 4.74e-01 | 77.5% | 86.3% |
| 2130765 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.63 | 42.0 | 4.95e-01 | 72.5% | 100.0% |
| 5024136 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.62 | 47.0 | 4.32e-01 | 94.1% | 60.7% |
| 3363024 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 40.0 | 4.67e-01 | 72.5% | 94.3% |
| 3589655 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.62 | 42.0 | 4.90e-01 | 72.5% | 100.0% |
| 4002804 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 45.0 | 4.85e-01 | 76.5% | 94.1% |
| 4327619 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.61 | 41.0 | 4.80e-01 | 72.5% | 100.0% |
| 4933746 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.61 | 43.0 | 4.84e-01 | 72.5% | 100.0% |
| 3413904 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.61 | 42.0 | 4.62e-01 | 77.5% | 90.0% |
| 3615993 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 42.0 | 4.39e-01 | 71.6% | 76.8% |
| 3385925 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.61 | 42.0 | 4.32e-01 | 70.6% | 80.0% |
| 3934089 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.61 | 39.0 | 3.96e-01 | 71.6% | 63.8% |
| 4097955 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.60 | 39.0 | 4.36e-01 | 70.6% | 85.0% |
| 3799466 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 42.0 | 4.51e-01 | 76.5% | 85.9% |
| 4289541 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.59 | 39.0 | 4.38e-01 | 70.6% | 89.3% |
| 3514146 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 43.0 | 4.80e-01 | 94.1% | 98.8% |
| 4156497 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.59 | 40.0 | 4.27e-01 | 70.6% | 94.4% |
| 3716427 | 2.1.1.224 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29084 | 0.59 | 43.0 | 4.02e-01 | 95.1% | 61.6% |
| 4289266 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.57 | 39.0 | 4.37e-01 | 72.5% | 94.7% |
| 4582543 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.57 | 41.0 | 4.28e-01 | 76.5% | 83.2% |
| 3905131 | 2.1.1.66 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CTC1 | 0.54 | 45.0 | 3.79e-01 | 93.1% | 80.0% |
| 4160932 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.54 | 43.0 | 3.16e-01 | 88.2% | 83.1% |
| 3956619 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 42.0 | 4.39e-01 | 93.1% | 93.7% |
| 3591227 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.53 | 45.0 | 3.33e-01 | 92.2% | 79.2% |
| 3740667 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.52 | 41.0 | 4.22e-01 | 87.3% | 88.4% |
| 4330070 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.52 | 42.0 | 3.04e-01 | 89.2% | 96.5% |
| 3605283 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.52 | 45.0 | 3.38e-01 | 94.1% | 81.6% |
| 4964437 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 42.0 | 4.40e-01 | 95.1% | 98.9% |
D2
high
residues 260-351
D3
high
residues 1089-1163
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3okxB00 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.75 | 68.0 | 5.39e-01 | 100.0% | 83.2% |
| 2nv4A00 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.72 | 64.0 | 5.31e-01 | 100.0% | 91.7% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.71 | 63.0 | 6.21e-01 | 98.7% | 96.2% |
| 2hlcA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.70 | 52.0 | 4.38e-01 | 80.0% | 60.3% |
| 2v31A01 | 2.40.30.180 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain | 0.69 | 62.0 | 5.69e-01 | 100.0% | 82.5% |
| 2r6hA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.67 | 59.0 | 4.79e-01 | 98.7% | 95.8% |
| 4g1vA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.67 | 59.0 | 5.13e-01 | 100.0% | 93.2% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 58.0 | 5.62e-01 | 94.7% | 95.2% |
| 2wzpR01 | 2.30.300.20 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 | 0.67 | 53.0 | 3.90e-01 | 85.3% | 71.4% |
| 1e62A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.67 | 56.0 | 4.74e-01 | 94.7% | 89.8% |
| 4dt4A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.67 | 42.0 | 4.70e-01 | 72.0% | 84.2% |
| 2as9B01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 48.0 | 4.41e-01 | 80.0% | 57.4% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 57.0 | 5.24e-01 | 98.7% | 96.0% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.63 | 55.0 | 5.30e-01 | 98.7% | 91.8% |
| 4jcwA01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.62 | 55.0 | 4.94e-01 | 98.7% | 96.2% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 53.0 | 4.99e-01 | 97.3% | 84.8% |
| 2arzA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 46.0 | 3.78e-01 | 85.3% | 47.3% |
| 3e1sA04 | 2.30.30.940 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 44.0 | 4.57e-01 | 78.7% | 91.3% |
| 3cp7B02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 43.0 | 3.93e-01 | 80.0% | 62.9% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 45.0 | 4.69e-01 | 82.7% | 94.3% |
| 2iabA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 43.0 | 3.52e-01 | 82.7% | 46.9% |
| 1m1fB00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 42.0 | 3.79e-01 | 80.0% | 83.8% |
| 4k4kA01 | 2.60.40.2620 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrillin-like | 0.56 | 47.0 | 4.03e-01 | 96.0% | 74.8% |
| 2qz5A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.55 | 46.0 | 3.72e-01 | 94.7% | 53.9% |
| 4fdyA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.55 | 42.0 | 3.52e-01 | 84.0% | 48.5% |
| 1novA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 45.0 | 3.15e-01 | 100.0% | 77.7% |
| 7oc3A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 40.0 | 3.82e-01 | 80.0% | 72.8% |
| 3dnhA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 46.0 | 3.73e-01 | 98.7% | 51.7% |
| 2w82A01 | 3.10.20.480 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Antirestriction protein ArdA, domain 1 | 0.52 | 35.0 | 3.83e-01 | 74.7% | 88.1% |
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 44.0 | 3.47e-01 | 98.7% | 51.4% |
| 4odbA00 | 2.60.90.20 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain | 0.52 | 42.0 | 3.43e-01 | 94.7% | 76.5% |
| 4cshA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.51 | 40.0 | 3.20e-01 | 88.0% | 44.5% |
| 3bgaA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 3.98e-01 | 100.0% | 76.2% |
| 3up6A02 | 2.60.40.3380 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 41.0 | 3.37e-01 | 94.7% | 62.8% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4026674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.85 | 77.0 | 7.52e-01 | 100.0% | 90.0% |
| 3969204 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.83 | 70.0 | 7.05e-01 | 98.7% | 89.3% |
| 3973332 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.81 | 68.0 | 6.90e-01 | 100.0% | 90.7% |
| 3597282 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.80 | 72.0 | 7.03e-01 | 100.0% | 90.0% |
| 5079674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.80 | 68.0 | 6.81e-01 | 94.7% | 89.3% |
| 1714447 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.80 | 73.0 | 5.93e-01 | 98.7% | 62.9% |
| 3944437 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.78 | 70.0 | 6.83e-01 | 97.3% | 90.0% |
| 3712506 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.77 | 69.0 | 6.66e-01 | 100.0% | 85.9% |
| 3512272 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.77 | 67.0 | 6.72e-01 | 100.0% | 94.7% |
| 3272448 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.77 | 69.0 | 6.32e-01 | 97.3% | 83.2% |
| 3291083 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.75 | 68.0 | 6.37e-01 | 98.7% | 91.1% |
| 4998219 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 65.0 | 5.66e-01 | 97.3% | 90.4% |
| 3180314 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 67.0 | 6.41e-01 | 98.7% | 94.1% |
| 4939996 | 1.1.7.46 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B | 0.69 | 62.0 | 5.48e-01 | 97.3% | 83.8% |
| 3299946 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.68 | 61.0 | 5.23e-01 | 97.3% | 88.7% |
| 2448616 | 3734.1.1.1 ↗ | beta barrels › P22 coat protein insertion domain › P22 coat protein insertion domain › P22 coat protein insertion domain › P22_CoatProtein | 0.68 | 60.0 | 5.22e-01 | 98.7% | 93.9% |
| 4181458 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.68 | 59.0 | 5.26e-01 | 98.7% | 87.3% |
| 3247934 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.67 | 59.0 | 5.44e-01 | 96.0% | 91.6% |
| 3615287 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 59.0 | 5.31e-01 | 100.0% | 100.0% |
| 3103203 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.67 | 58.0 | 5.53e-01 | 98.7% | 86.7% |
| 3180042 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.67 | 59.0 | 5.15e-01 | 100.0% | 90.4% |
| 5057694 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.66 | 58.0 | 5.28e-01 | 98.7% | 94.0% |
| 1030933 | 1.1.7.29 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › End_beta_barrel | 0.66 | 59.0 | 5.60e-01 | 100.0% | 93.3% |
| 4337472 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.64 | 55.0 | 5.07e-01 | 94.7% | 84.2% |
| 3415428 | 1.1.7.69 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel | 0.63 | 55.0 | 4.97e-01 | 98.7% | 80.0% |
| 4319097 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 44.0 | 4.87e-01 | 78.7% | 94.8% |
| 3188712 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.63 | 49.0 | 4.48e-01 | 84.0% | 87.0% |
| 2770405 | 1.1.7.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_9 | 0.63 | 54.0 | 4.89e-01 | 98.7% | 94.3% |
| 3708577 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 53.0 | 4.35e-01 | 97.3% | 64.1% |
| 3782050 | 4.18.1.1 ↗ | beta barrels › SH3 › Plus3 › Plus3 › Plus-3 | 0.61 | 49.0 | 4.03e-01 | 85.3% | 83.0% |
| 3932484 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 46.0 | 4.98e-01 | 80.0% | 100.0% |
| 3174427 | 4.18.1.1 ↗ | beta barrels › SH3 › Plus3 › Plus3 › Plus-3 | 0.60 | 48.0 | 3.84e-01 | 88.0% | 70.3% |
| 3989070 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.60 | 52.0 | 3.73e-01 | 96.0% | 62.8% |
| 3927795 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 42.0 | 4.63e-01 | 76.0% | 100.0% |
| 3736152 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.58 | 43.0 | 3.84e-01 | 80.0% | 97.2% |
| 3801890 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.58 | 44.0 | 3.34e-01 | 85.3% | 37.5% |
| 4210485 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.58 | 44.0 | 4.64e-01 | 84.0% | 95.4% |
| 4283343 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.57 | 45.0 | 4.46e-01 | 86.7% | 95.0% |
| 3258610 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 45.0 | 4.46e-01 | 88.0% | 88.7% |
| 3587639 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.56 | 43.0 | 3.84e-01 | 82.7% | 84.3% |
| 4941819 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 45.0 | 4.25e-01 | 93.3% | 73.3% |
| 3935286 | 11.2.1.58 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF26186 | 0.56 | 46.0 | 3.52e-01 | 94.7% | 57.9% |
| 5033754 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 47.0 | 4.43e-01 | 98.7% | 84.2% |
| 3985127 | 11.1.4.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › phage_tail_N | 0.55 | 43.0 | 4.08e-01 | 97.3% | 72.2% |
| 2702587 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.54 | 41.0 | 3.67e-01 | 82.7% | 82.1% |
| 3588353 | 11.1.4.36 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SpaA | 0.54 | 43.0 | 3.99e-01 | 98.7% | 67.0% |
| 3403486 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 44.0 | 3.97e-01 | 96.0% | 81.8% |
| 4276778 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.53 | 44.0 | 4.10e-01 | 96.0% | 74.7% |
| 1562396 | 11.1.1.122 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GO-like_E_set | 0.52 | 44.0 | 4.10e-01 | 98.7% | 77.8% |
| 2842230 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.52 | 41.0 | 3.55e-01 | 97.3% | 52.4% |
| 5037697 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.51 | 41.0 | 2.93e-01 | 88.0% | 51.7% |
| 3595571 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 43.0 | 4.10e-01 | 98.7% | 81.1% |
| 5009285 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 42.0 | 3.67e-01 | 98.7% | 78.4% |
| 4049807 | 11.1.4.102 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SOP4 | 0.50 | 42.0 | 3.43e-01 | 96.0% | 96.0% |
D4
medium
residues 64-143
D5
medium
residues 361-432
D6
medium
residues 446-530
Domain cluster:
rep: MK291444.1__AZV00409.1__pthi1_p44__00044__D644-710
D7
medium
residues 644-710
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b9wA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 55.0 | 4.82e-01 | 100.0% | 86.1% |
| 2ba0A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 54.0 | 4.99e-01 | 95.5% | 90.8% |
| 3m7nA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 53.0 | 4.96e-01 | 97.0% | 97.7% |
| 3bzcA05 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 52.0 | 4.71e-01 | 94.0% | 77.1% |
| 2k52A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 52.0 | 5.04e-01 | 94.0% | 94.6% |
| 2je6I02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 52.0 | 4.85e-01 | 97.0% | 92.0% |
| 3psiA06 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 52.0 | 4.61e-01 | 95.5% | 76.0% |
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 43.0 | 3.98e-01 | 97.0% | 56.2% |
| 3ntkB01 | 2.40.50.790 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 51.0 | 4.75e-01 | 95.5% | 97.7% |
| 3zyyX03 | 3.10.20.880 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.61 | 50.0 | 4.66e-01 | 95.5% | 88.5% |
| 4jpbW02 | 2.40.50.180 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 | 0.60 | 51.0 | 4.85e-01 | 92.5% | 86.1% |
| 2rcnA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 47.0 | 4.90e-01 | 92.5% | 95.1% |
| 2ahoB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 49.0 | 4.70e-01 | 94.0% | 88.7% |
| 3u50C01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 51.0 | 4.18e-01 | 97.0% | 89.0% |
| 1g2bA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 37.0 | 3.86e-01 | 89.6% | 67.7% |
| 1bkbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 49.0 | 4.97e-01 | 92.5% | 96.9% |
| 1ckmA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 45.0 | 4.25e-01 | 94.0% | 68.7% |
| 3fysA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.57 | 39.0 | 3.24e-01 | 94.0% | 38.0% |
| 3a2yA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.55 | 35.0 | 2.59e-01 | 100.0% | 22.7% |
| 2khiA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 45.0 | 4.13e-01 | 95.5% | 80.0% |
| 3s24A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 46.0 | 4.13e-01 | 94.0% | 72.3% |
| 1ufxA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.54 | 40.0 | 3.61e-01 | 83.6% | 89.3% |
| 3nswA00 | 2.40.50.780 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 43.0 | 3.83e-01 | 92.5% | 67.0% |
| 4npsA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 38.0 | 4.07e-01 | 83.6% | 93.1% |
| 1chmA02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.51 | 42.0 | 3.02e-01 | 100.0% | 82.1% |
| 3f1sB03 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 39.0 | 3.36e-01 | 85.1% | 89.6% |
| 2ztbA03 | 2.60.40.3040 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 34.0 | 3.69e-01 | 95.5% | 97.9% |
| 6e4bA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.51 | 42.0 | 3.04e-01 | 92.5% | 96.1% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3593533 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 57.0 | 5.04e-01 | 97.0% | 98.0% |
| 4053036 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.65 | 55.0 | 4.93e-01 | 95.5% | 81.1% |
| 3383363 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.65 | 53.0 | 4.85e-01 | 91.0% | 94.4% |
| 4458583 | 2.1.1.109 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP4_S1 | 0.65 | 54.0 | 4.98e-01 | 95.5% | 93.3% |
| 3614876 | 2.1.1.39 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rbc25 | 0.65 | 54.0 | 4.60e-01 | 95.5% | 96.5% |
| 3612341 | 2.1.1.109 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP4_S1 | 0.65 | 54.0 | 4.88e-01 | 95.5% | 93.7% |
| 3838487 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.65 | 53.0 | 4.91e-01 | 94.0% | 85.6% |
| 3435395 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.64 | 53.0 | 3.84e-01 | 94.0% | 36.6% |
| 3595340 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 54.0 | 4.58e-01 | 95.5% | 97.4% |
| 3273657 | 2.1.1.39 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rbc25 | 0.64 | 55.0 | 4.38e-01 | 97.0% | 95.0% |
| 3253124 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.64 | 53.0 | 4.59e-01 | 94.0% | 92.7% |
| 3700055 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 54.0 | 4.85e-01 | 95.5% | 97.9% |
| 3899845 | 2.1.1.116 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 | 0.64 | 55.0 | 5.01e-01 | 100.0% | 92.6% |
| 4682066 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.64 | 53.0 | 4.83e-01 | 94.0% | 78.5% |
| 5043072 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 50.0 | 4.98e-01 | 94.0% | 82.9% |
| 3899847 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.64 | 54.0 | 4.75e-01 | 95.5% | 75.0% |
| 4981578 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 56.0 | 4.83e-01 | 97.0% | 61.9% |
| 4240224 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.64 | 54.0 | 5.16e-01 | 97.0% | 96.2% |
| 3854800 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.64 | 53.0 | 4.90e-01 | 95.5% | 83.3% |
| 3514142 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 53.0 | 5.00e-01 | 95.5% | 89.4% |
| 4026487 | 2.1.1.39 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rbc25 | 0.64 | 54.0 | 4.67e-01 | 97.0% | 96.4% |
| 3195732 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.63 | 53.0 | 5.02e-01 | 94.0% | 92.5% |
| 4218294 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.63 | 52.0 | 4.80e-01 | 94.0% | 83.3% |
| 3501894 | 2.1.1.39 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rbc25 | 0.63 | 54.0 | 4.47e-01 | 97.0% | 96.0% |
| 1682596 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.63 | 53.0 | 4.33e-01 | 95.5% | 59.2% |
| 3957861 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.63 | 54.0 | 4.85e-01 | 95.5% | 78.9% |
| 3929346 | 2.1.1.39 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rbc25 | 0.63 | 54.0 | 4.51e-01 | 97.0% | 95.8% |
| 3694745 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.63 | 53.0 | 4.83e-01 | 94.0% | 82.2% |
| 3168186 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.63 | 53.0 | 5.00e-01 | 94.0% | 95.0% |
| 4029771 | 885.1.1.0 ↗ | a+b complex topology › Transcription factor NusA, N-terminal domain › Transcription factor NusA, N-terminal domain › Transcription factor NusA, N-terminal domain | 0.63 | 53.0 | 4.12e-01 | 95.5% | 47.7% |
| 3573967 | 2.1.1.39 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rbc25 | 0.63 | 54.0 | 4.43e-01 | 97.0% | 91.2% |
| 4017905 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.63 | 51.0 | 4.73e-01 | 89.6% | 94.1% |
| 3785800 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 52.0 | 3.70e-01 | 94.0% | 32.7% |
| 4021136 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 53.0 | 4.81e-01 | 97.0% | 91.6% |
| 4572080 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.63 | 52.0 | 4.86e-01 | 94.0% | 88.2% |
| 3740007 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.63 | 51.0 | 4.99e-01 | 92.5% | 97.3% |
| 3485637 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 53.0 | 4.91e-01 | 95.5% | 91.8% |
| 3514147 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 54.0 | 4.79e-01 | 100.0% | 98.0% |
| 5024136 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.62 | 52.0 | 4.22e-01 | 95.5% | 52.6% |
| 3244959 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.62 | 53.0 | 5.24e-01 | 95.5% | 97.1% |
| 3627655 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.62 | 51.0 | 4.71e-01 | 94.0% | 82.2% |
| 3287699 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.62 | 51.0 | 4.72e-01 | 94.0% | 82.2% |
| 4538502 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.62 | 49.0 | 4.63e-01 | 89.6% | 82.4% |
| 3837370 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.62 | 51.0 | 4.73e-01 | 95.5% | 83.3% |
| 3275931 | 2.1.1.87 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB | 0.62 | 52.0 | 4.40e-01 | 95.5% | 80.0% |
| 4289165 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.62 | 52.0 | 4.61e-01 | 95.5% | 77.0% |
| 3485666 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.62 | 52.0 | 4.77e-01 | 95.5% | 83.3% |
| 3785824 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.62 | 51.0 | 4.85e-01 | 94.0% | 92.5% |
| 3195689 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.61 | 51.0 | 4.59e-01 | 94.0% | 80.0% |
| 3736756 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.61 | 50.0 | 4.77e-01 | 92.5% | 93.8% |
| 3351656 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 52.0 | 4.53e-01 | 97.0% | 90.5% |
| 3252917 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 51.0 | 4.93e-01 | 94.0% | 97.3% |
| 5052784 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 52.0 | 5.05e-01 | 95.5% | 94.6% |
| 3425319 | 2.1.1.87 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB | 0.61 | 47.0 | 4.04e-01 | 85.1% | 67.3% |
| 3514148 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 52.0 | 4.72e-01 | 95.5% | 83.3% |
| 3787653 | 2.1.1.87 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB | 0.61 | 50.0 | 4.40e-01 | 94.0% | 90.5% |
| 3615993 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 51.0 | 4.63e-01 | 97.0% | 72.6% |
| 3633102 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.60 | 50.0 | 4.77e-01 | 94.0% | 92.5% |
| 3785795 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.60 | 50.0 | 4.75e-01 | 94.0% | 95.0% |
| 4654223 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.60 | 48.0 | 4.47e-01 | 89.6% | 100.0% |
| 4173356 | 2.1.1.78 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PCB_OB | 0.60 | 48.0 | 4.32e-01 | 89.6% | 69.5% |
| 3311698 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 50.0 | 4.92e-01 | 95.5% | 90.5% |
| 3168187 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 49.0 | 4.52e-01 | 94.0% | 82.2% |
| 3385925 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.60 | 49.0 | 4.46e-01 | 94.0% | 75.8% |
| 3965727 | 2.1.1.78 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PCB_OB | 0.59 | 47.0 | 4.10e-01 | 89.6% | 66.7% |
| 5028349 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.59 | 49.0 | 4.08e-01 | 94.0% | 57.5% |
| 3216903 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 48.0 | 4.34e-01 | 94.0% | 74.7% |
| 3998577 | 2.1.1.253 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29478 | 0.58 | 46.0 | 4.74e-01 | 89.6% | 100.0% |
| 4097689 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 48.0 | 4.73e-01 | 92.5% | 94.3% |
| 3577516 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.57 | 39.0 | 2.72e-01 | 71.6% | 43.5% |
| 4940715 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.57 | 48.0 | 4.12e-01 | 95.5% | 72.7% |
| 5040417 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 43.0 | 4.58e-01 | 89.6% | 98.2% |
| 5028240 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.57 | 47.0 | 3.86e-01 | 94.0% | 57.7% |
| 1937099 | 301.13.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV | 0.57 | 39.0 | 3.25e-01 | 94.0% | 38.3% |
| 4997744 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 46.0 | 3.98e-01 | 97.0% | 67.0% |
| 3538384 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 45.0 | 2.72e-01 | 97.0% | 26.3% |
| 3889658 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 43.0 | 4.29e-01 | 91.0% | 90.0% |
| 3758013 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 45.0 | 2.96e-01 | 97.0% | 48.2% |
| 5081068 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 41.0 | 3.44e-01 | 86.6% | 72.0% |
| 5059842 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 43.0 | 3.93e-01 | 97.0% | 88.0% |
| 3907939 | 10.32.1.263 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C, DDR1-2_DS-like | 0.53 | 43.0 | 2.75e-01 | 89.6% | 41.1% |
| 3415803 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.51 | 38.0 | 3.03e-01 | 85.1% | 61.9% |
D8
medium
residues 869-967_997-1013
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7zs9401 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.59 | 53.0 | 4.33e-01 | 100.0% | 91.9% |
| 3jurA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.57 | 51.0 | 3.47e-01 | 100.0% | 89.4% |
| 2j6vA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.56 | 49.0 | 3.80e-01 | 100.0% | 49.3% |
| 1sxjE01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 38.0 | 3.49e-01 | 100.0% | 51.9% |
| 3h8gA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.55 | 42.0 | 3.76e-01 | 80.2% | 89.4% |
| 5ailA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.55 | 46.0 | 3.99e-01 | 91.4% | 85.0% |
| 3mc3A00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.53 | 42.0 | 4.14e-01 | 99.1% | 80.2% |
| 1z05A03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 47.0 | 4.18e-01 | 100.0% | 95.9% |
| 3jruA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.52 | 40.0 | 3.58e-01 | 81.0% | 89.6% |
| 1bd3A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 41.0 | 3.31e-01 | 85.3% | 89.7% |
| 3e15A00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 43.0 | 3.23e-01 | 95.7% | 36.4% |
| 3m1lA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 44.0 | 3.67e-01 | 100.0% | 53.9% |
| 1ae1A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 44.0 | 3.55e-01 | 100.0% | 90.2% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4023841 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.58 | 46.0 | 3.94e-01 | 100.0% | 52.6% |
| 5082249 | 7575.1.1.0 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like | 0.56 | 51.0 | 3.99e-01 | 100.0% | 70.2% |
| 4980549 | 7529.1.1.3 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N | 0.55 | 45.0 | 3.98e-01 | 89.7% | 90.3% |
| 4966376 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.55 | 49.0 | 3.55e-01 | 99.1% | 72.4% |
| 3683483 | 7585.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 | 0.55 | 42.0 | 4.38e-01 | 81.9% | 94.3% |
| 4937812 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.55 | 49.0 | 3.46e-01 | 99.1% | 51.8% |
| 2629991 | 2496.1.1.3 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › SiaC | 0.55 | 48.0 | 4.70e-01 | 97.4% | 93.7% |
| 5073316 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 48.0 | 3.50e-01 | 99.1% | 70.8% |
| 5079558 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.53 | 48.0 | 4.09e-01 | 100.0% | 91.4% |
| 4402684 | 7573.1.1.4 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase | 0.53 | 41.0 | 3.46e-01 | 85.3% | 97.6% |
| 3165633 | 2003.1.7.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › DeoRC | 0.52 | 35.0 | 3.06e-01 | 88.8% | 41.8% |
| 4941757 | 2002.1.1.154 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_1 | 0.52 | 44.0 | 3.22e-01 | 100.0% | 32.5% |
| 3635988 | 7590.1.1.7 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › MID_MedPIWI | 0.52 | 46.0 | 3.67e-01 | 97.4% | 69.1% |
| 3560125 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.51 | 45.0 | 3.70e-01 | 100.0% | 52.6% |
| 3581388 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.51 | 44.0 | 4.25e-01 | 100.0% | 83.0% |
| 5030672 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 46.0 | 3.56e-01 | 100.0% | 72.8% |