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MK291445.1__AZV00435.1__pyei1_p18__00018

Bact-Vir

MK291445.1__AZV00435.1__pyei1_p18__00018

Identity

Accession:
MK291445 ↗
Kingdom:
phage

Quality

92.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Paracoccus_phage_vB_PyeM_Pyei1

TaxID: 2500566

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-71
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1j30A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.84 59.0 4.36e-01 72.6% 79.4%
6xssA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.84 55.0 5.33e-01 85.5% 60.9%
3fflA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.81 64.0 4.98e-01 87.1% 41.3%
1xnfA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.80 60.0 3.88e-01 87.1% 18.9%
4gywA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.77 57.0 4.64e-01 88.7% 44.8%
5fzsA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.77 56.0 4.57e-01 93.5% 43.9%
2jg0A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.77 64.0 3.71e-01 88.7% 27.8%
3ceqA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.76 63.0 4.09e-01 88.7% 22.0%
4yvoA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.74 59.0 4.66e-01 87.1% 43.7%
4gyoB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.74 56.0 4.22e-01 87.1% 35.3%
7c1iA01 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.73 58.0 4.91e-01 88.7% 53.0%
1lf6A02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.72 63.0 3.78e-01 93.5% 17.9%
4cc9B00 1.20.5.4730 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.72 49.0 4.21e-01 72.6% 44.9%
1lkoA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.71 65.0 4.86e-01 100.0% 89.7%
8fnyA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.71 61.0 4.17e-01 93.5% 29.1%
2oxlA00 1.20.5.5260 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.70 57.0 5.73e-01 95.2% 88.7%
3tjmA02 1.10.1470.20 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 0.69 46.0 4.16e-01 71.0% 82.2%
2ondA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.68 54.0 3.45e-01 93.5% 17.5%
5nl6A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 57.0 4.76e-01 100.0% 83.3%
1wp7A00 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.64 41.0 4.08e-01 85.5% 62.5%
1t3dA01 1.10.3130.10 Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 0.63 56.0 4.23e-01 96.8% 61.4%
7y4rB01 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.62 54.0 4.51e-01 96.8% 61.3%
4od4A02 1.20.120.1780 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UbiA prenyltransferase 0.62 52.0 4.33e-01 100.0% 75.6%
2kj8A00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.61 50.0 4.15e-01 95.2% 49.2%
4fm3A00 1.20.1270.390 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.60 56.0 4.74e-01 98.4% 69.5%
4x5mA00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.58 52.0 4.67e-01 100.0% 81.4%
4ioeA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.57 42.0 3.73e-01 77.4% 66.7%
2vtyA00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.56 46.0 3.56e-01 95.2% 39.6%
3u8zD02 1.20.80.60 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.56 41.0 3.98e-01 83.9% 71.4%
3l1nA02 1.20.1280.140 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.56 48.0 4.30e-01 96.8% 88.5%
2jbyA00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.56 47.0 3.81e-01 98.4% 49.6%
1qrvA00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.50 35.0 3.40e-01 79.0% 64.4%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3551840 109.4.1.190 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6 0.82 65.0 4.31e-01 87.1% 23.1%
1148717 109.4.1.210 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.81 64.0 5.98e-01 87.1% 69.3%
3874961 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.81 64.0 4.31e-01 87.1% 24.8%
1683529 109.4.1.1290 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_19 0.81 64.0 5.95e-01 87.1% 69.3%
3586149 109.4.1.192 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.81 60.0 3.86e-01 85.5% 19.6%
2825526 109.4.1.1300 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16, TPR_19 0.81 64.0 5.88e-01 87.1% 67.5%
59845 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.80 60.0 3.89e-01 87.1% 18.9%
4946563 109.4.1.198 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.80 64.0 3.90e-01 87.1% 15.8%
2814210 109.4.1.1427 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6, TPR_8, TPR_19 0.80 63.0 5.84e-01 87.1% 68.4%
4030078 101.1.17.29 ↗ alpha arrays › HTH › HTH › FF domain › CLAG 0.80 57.0 4.12e-01 100.0% 29.7%
4944515 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.79 63.0 4.21e-01 87.1% 24.8%
5001399 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.78 60.0 3.50e-01 87.1% 10.9%
3413574 3352.1.1.0 ↗ alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain 0.78 59.0 3.33e-01 85.5% 8.0%
2095496 109.4.1.1304 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10, TPR_12 0.78 62.0 4.03e-01 87.1% 20.9%
3448304 109.4.1.192 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.77 64.0 4.34e-01 87.1% 27.7%
3754394 109.4.1.2407 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_6, TPR_8, TPR_11 0.77 59.0 3.35e-01 87.1% 8.9%
4025903 604.9.1.0 ↗ alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 0.77 59.0 5.54e-01 87.1% 68.0%
3504179 109.4.1.198 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.76 60.0 4.74e-01 87.1% 43.3%
1910276 109.4.1.1499 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_6, TPR_19 0.76 61.0 5.68e-01 85.5% 70.7%
3587180 109.4.1.250 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RNPP_C 0.76 62.0 4.13e-01 88.7% 25.9%
3257076 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 61.0 4.52e-01 87.1% 36.6%
4944514 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 62.0 3.83e-01 88.7% 19.1%
5050100 109.4.1.198 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.75 61.0 4.62e-01 87.1% 39.3%
5051215 192.11.1.1 ↗ alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR 0.75 66.0 6.21e-01 100.0% 80.0%
3885817 109.4.1.777 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.75 61.0 4.03e-01 87.1% 25.2%
5022008 109.4.1.192 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.73 59.0 4.17e-01 87.1% 32.4%
4235209 109.4.1.192 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.73 59.0 4.23e-01 85.5% 35.2%
3661756 109.4.1.2209 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_21, TPR_8, TPR_10, TPR_12 0.73 61.0 3.71e-01 93.5% 14.9%
5077229 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 64.0 4.08e-01 100.0% 22.2%
3608536 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 58.0 3.59e-01 85.5% 16.9%
3232300 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 53.0 4.11e-01 87.1% 36.9%
4017387 109.4.1.146 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_load 0.71 58.0 4.15e-01 88.7% 31.4%
5022166 109.4.1.922 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_9 0.69 61.0 3.85e-01 93.5% 25.5%
3295931 109.4.1.1286 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_12 0.67 60.0 3.59e-01 100.0% 58.9%
3990092 1075.1.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain 0.64 52.0 3.64e-01 100.0% 72.0%
3847975 604.12.1.9 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT2 0.64 57.0 4.92e-01 100.0% 93.7%
5030918 632.11.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DUF357 0.62 57.0 5.16e-01 96.8% 86.3%
3943035 639.2.1.0 ↗ alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) 0.59 48.0 4.78e-01 100.0% 92.3%
5060253 632.23.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Helical linker domain in nicking endonuclease N.BspD6I › Helical linker domain in nicking endonuclease N.BspD6I 0.53 40.0 4.00e-01 85.5% 78.5%