←Back to structures
MK291445.1__AZV00482.1__pyei1_p65__00065
Bact-VirMK291445.1__AZV00482.1__pyei1_p65__00065
Identity
- Accession:
- MK291445 ↗
- Kingdom:
- phage
Quality
57.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 299-361
D2
medium
residues 376-437_524-664
Domain cluster:
representative
CATH (71)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bwpA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.83 | 70.0 | 6.96e-01 | 100.0% | 83.5% |
| 4rshA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.82 | 68.0 | 7.35e-01 | 97.0% | 98.9% |
| 4rw0A00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.82 | 71.0 | 7.47e-01 | 99.5% | 98.4% |
| 2hsjD00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.81 | 69.0 | 6.83e-01 | 99.5% | 83.6% |
| 3p94A00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.80 | 69.0 | 6.95e-01 | 100.0% | 88.7% |
| 1ivnA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.78 | 65.0 | 6.94e-01 | 100.0% | 98.9% |
| 4lhsA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.76 | 66.0 | 6.84e-01 | 100.0% | 96.3% |
| 4h08A00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.76 | 65.0 | 6.56e-01 | 100.0% | 89.5% |
| 1z8hA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.74 | 69.0 | 6.93e-01 | 100.0% | 97.0% |
| 3b2nA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.74 | 44.0 | 5.56e-01 | 99.5% | 99.2% |
| 3rjtA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.74 | 71.0 | 6.97e-01 | 100.0% | 96.7% |
| 4c6sA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.73 | 50.0 | 5.84e-01 | 100.0% | 97.2% |
| 5a4aA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.73 | 64.0 | 6.42e-01 | 99.0% | 88.9% |
| 4q9aA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.72 | 69.0 | 6.76e-01 | 100.0% | 95.4% |
| 2o14A02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.72 | 69.0 | 6.87e-01 | 100.0% | 99.0% |
| 1a2oA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 46.0 | 5.55e-01 | 98.5% | 98.5% |
| 2vptA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.71 | 66.0 | 6.68e-01 | 100.0% | 98.0% |
| 1escA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.71 | 67.0 | 5.75e-01 | 99.5% | 99.0% |
| 7tjbA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.71 | 66.0 | 6.62e-01 | 100.0% | 96.6% |
| 8gr2A01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.71 | 65.0 | 6.66e-01 | 96.1% | 100.0% |
| 3clkB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 40.0 | 4.97e-01 | 100.0% | 90.2% |
| 3v1tC01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.70 | 46.0 | 5.02e-01 | 99.0% | 78.8% |
| 4hyqA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.70 | 64.0 | 6.10e-01 | 97.0% | 98.7% |
| 5b5lA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.70 | 67.0 | 6.65e-01 | 100.0% | 99.0% |
| 4xvhA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.69 | 66.0 | 6.42e-01 | 100.0% | 98.6% |
| 2wabA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.69 | 65.0 | 6.44e-01 | 100.0% | 98.1% |
| 2waaA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.66 | 63.0 | 6.26e-01 | 100.0% | 97.2% |
| 1j24A00 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 42.0 | 5.04e-01 | 100.0% | 96.2% |
| 2w9xA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.65 | 62.0 | 6.02e-01 | 100.0% | 96.4% |
| 3u37A02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.65 | 62.0 | 5.74e-01 | 100.0% | 96.8% |
| 5di3B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 52.0 | 5.25e-01 | 100.0% | 84.8% |
| 7jt8I02 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.63 | 39.0 | 4.55e-01 | 94.6% | 86.1% |
| 3r7wA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 52.0 | 5.53e-01 | 100.0% | 97.8% |
| 3e9nA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 52.0 | 5.43e-01 | 99.5% | 94.2% |
| 1c2yA00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.62 | 43.0 | 4.79e-01 | 99.5% | 90.3% |
| 3g23A02 | 3.50.30.60 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › LD-carboxypeptidase A C-terminal domain-like | 0.62 | 34.0 | 4.51e-01 | 80.8% | 100.0% |
| 2c54A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 48.0 | 5.09e-01 | 97.0% | 89.1% |
| 3rkuA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 56.0 | 5.11e-01 | 99.5% | 86.6% |
| 4qecA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 56.0 | 5.23e-01 | 99.5% | 93.5% |
| 1szpB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 43.0 | 4.30e-01 | 96.1% | 70.1% |
| 3tjrA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 56.0 | 5.15e-01 | 99.0% | 83.6% |
| 6qheB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 56.0 | 5.11e-01 | 99.5% | 91.1% |
| 3m1aJ00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 56.0 | 5.05e-01 | 99.5% | 86.5% |
| 2ph5A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 42.0 | 4.62e-01 | 99.0% | 89.5% |
| 3e9qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 55.0 | 5.07e-01 | 99.5% | 86.7% |
| 2p14A00 | 3.40.91.50 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.59 | 41.0 | 4.34e-01 | 96.1% | 78.0% |
| 6feaB01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.57 | 37.0 | 4.26e-01 | 99.5% | 89.0% |
| 1rliD00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.57 | 45.0 | 4.91e-01 | 97.5% | 100.0% |
| 3czpB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 48.0 | 4.77e-01 | 100.0% | 85.9% |
| 4c6rA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.56 | 43.0 | 4.67e-01 | 100.0% | 98.8% |
| 3u61C01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 35.0 | 3.83e-01 | 75.9% | 75.3% |
| 1nmnA00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.56 | 34.0 | 4.18e-01 | 96.1% | 99.2% |
| 4pmxA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 45.0 | 3.95e-01 | 86.2% | 82.4% |
| 4kruA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 47.0 | 4.61e-01 | 90.6% | 94.4% |
| 7xg9A01 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.54 | 46.0 | 4.10e-01 | 89.7% | 86.6% |
| 5ay7B00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 44.0 | 3.80e-01 | 86.2% | 82.8% |
| 4oifB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 47.0 | 3.80e-01 | 94.6% | 95.8% |
| 1vhxB00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.54 | 36.0 | 4.21e-01 | 99.0% | 98.6% |
| 3zs7A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 49.0 | 4.41e-01 | 98.5% | 83.0% |
| 1g01A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 48.0 | 3.96e-01 | 96.1% | 80.1% |
| 3ianA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 47.0 | 4.06e-01 | 96.1% | 98.1% |
| 4nnaA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 48.0 | 4.06e-01 | 98.5% | 97.6% |
| 3a9iA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 44.0 | 4.02e-01 | 88.2% | 83.7% |
| 7bipB01 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.52 | 44.0 | 3.75e-01 | 89.7% | 84.1% |
| 4o1eB00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.52 | 44.0 | 4.04e-01 | 90.1% | 85.8% |
| 5xkcA00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.51 | 45.0 | 3.52e-01 | 96.1% | 97.5% |
| 4qhrA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.51 | 42.0 | 4.24e-01 | 87.2% | 88.9% |
| 4e5sA02 | 3.50.30.60 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › LD-carboxypeptidase A C-terminal domain-like | 0.51 | 39.0 | 4.25e-01 | 89.2% | 95.9% |
| 4yi7A02 | 3.40.1030.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain | 0.51 | 47.0 | 4.32e-01 | 100.0% | 87.7% |
| 3ndoA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 45.0 | 4.34e-01 | 94.6% | 88.9% |
| 3o8oF01 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 44.0 | 4.27e-01 | 98.5% | 85.3% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4145907 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.84 | 68.0 | 7.36e-01 | 97.5% | 97.1% |
| 3902230 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.83 | 67.0 | 7.12e-01 | 99.5% | 92.8% |
| 3511453 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.83 | 70.0 | 6.96e-01 | 100.0% | 84.3% |
| 3398275 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.82 | 70.0 | 6.72e-01 | 100.0% | 79.1% |
| 1492214 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.82 | 71.0 | 7.47e-01 | 99.5% | 98.4% |
| 223415 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.80 | 70.0 | 6.91e-01 | 99.5% | 86.3% |
| 3584467 | 2007.5.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase | 0.79 | 55.0 | 5.89e-01 | 81.8% | 81.1% |
| 4624410 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.77 | 65.0 | 6.70e-01 | 99.5% | 91.8% |
| 4017791 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.76 | 73.0 | 7.19e-01 | 100.0% | 96.3% |
| 1144534 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.74 | 70.0 | 6.81e-01 | 98.0% | 94.1% |
| 3672327 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.74 | 52.0 | 5.99e-01 | 100.0% | 97.3% |
| 3205172 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.73 | 64.0 | 5.91e-01 | 90.6% | 95.6% |
| 1682152 | 2007.5.1.14 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › OSK | 0.73 | 64.0 | 6.39e-01 | 99.0% | 88.5% |
| 3953400 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.72 | 65.0 | 6.55e-01 | 100.0% | 93.7% |
| 2723705 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.71 | 68.0 | 6.84e-01 | 100.0% | 98.1% |
| 4020293 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.71 | 66.0 | 6.76e-01 | 99.0% | 100.0% |
| 1199965 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.70 | 46.0 | 4.96e-01 | 99.0% | 77.0% |
| 4248023 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.70 | 49.0 | 5.22e-01 | 99.5% | 80.6% |
| 4653616 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.69 | 48.0 | 5.24e-01 | 99.0% | 84.1% |
| 5074114 | 2007.5.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase | 0.69 | 64.0 | 5.93e-01 | 100.0% | 88.6% |
| 1156537 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.66 | 63.0 | 6.26e-01 | 100.0% | 97.2% |
| 3263363 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.66 | 48.0 | 5.02e-01 | 99.0% | 80.5% |
| 4946557 | 2004.1.1.119 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gtr1_RagA | 0.66 | 53.0 | 5.65e-01 | 100.0% | 95.6% |
| 3511261 | 2006.1.3.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_3 | 0.65 | 41.0 | 4.89e-01 | 100.0% | 94.1% |
| 3271634 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.64 | 48.0 | 4.69e-01 | 98.5% | 70.9% |
| 4944546 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.64 | 52.0 | 5.41e-01 | 100.0% | 93.0% |
| 3283727 | 2003.1.1.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 | 0.63 | 53.0 | 4.89e-01 | 99.0% | 70.4% |
| 4945194 | 2004.1.1.119 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gtr1_RagA | 0.63 | 51.0 | 5.50e-01 | 100.0% | 98.3% |
| 5073108 | 2004.1.1.119 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gtr1_RagA | 0.63 | 52.0 | 5.55e-01 | 98.0% | 97.8% |
| 5052305 | 2004.1.1.119 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gtr1_RagA | 0.63 | 51.0 | 5.47e-01 | 95.6% | 96.6% |
| 3717757 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.63 | 52.0 | 5.07e-01 | 100.0% | 79.1% |
| 3706843 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 51.0 | 5.34e-01 | 100.0% | 93.5% |
| 3276368 | 2004.1.1.598 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF29907 | 0.62 | 49.0 | 5.21e-01 | 100.0% | 93.7% |
| 4944952 | 2004.1.1.119 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gtr1_RagA | 0.62 | 51.0 | 5.14e-01 | 100.0% | 86.5% |
| 3912889 | 2004.1.1.118 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 | 0.62 | 51.0 | 5.38e-01 | 100.0% | 97.2% |
| 3509799 | 2004.1.1.119 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gtr1_RagA | 0.62 | 52.0 | 5.05e-01 | 99.0% | 80.9% |
| 3878551 | 2004.1.1.118 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 | 0.61 | 48.0 | 4.82e-01 | 99.0% | 80.5% |
| 3779142 | 2004.1.1.954 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NXPE4_C | 0.61 | 56.0 | 4.99e-01 | 99.0% | 70.7% |
| 3701056 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.61 | 41.0 | 4.76e-01 | 83.3% | 94.5% |
| 5000532 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.60 | 53.0 | 5.28e-01 | 99.0% | 90.7% |
| 4011536 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 51.0 | 5.33e-01 | 100.0% | 96.3% |
| 3849833 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 44.0 | 4.66e-01 | 100.0% | 85.6% |
| 3472154 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 49.0 | 5.17e-01 | 100.0% | 97.2% |
| 3963670 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.59 | 55.0 | 4.99e-01 | 99.5% | 83.3% |
| 3279581 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.58 | 54.0 | 5.18e-01 | 98.0% | 96.1% |
| 4526786 | 301.6.1.9 ↗ | a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › Tubulin | 0.58 | 54.0 | 4.44e-01 | 100.0% | 59.4% |
| 3998087 | 2004.1.1.598 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF29907 | 0.58 | 49.0 | 4.97e-01 | 100.0% | 90.0% |
| 3734314 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.58 | 54.0 | 4.43e-01 | 99.0% | 62.3% |
| 3719627 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.57 | 53.0 | 4.57e-01 | 98.5% | 72.1% |
| 3882834 | 2004.1.1.171 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Smg8_Smg9 | 0.57 | 52.0 | 4.40e-01 | 100.0% | 82.0% |
| 3532940 | 2004.1.1.164 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc | 0.57 | 53.0 | 5.27e-01 | 100.0% | 95.2% |
| 4627407 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 52.0 | 4.40e-01 | 100.0% | 82.8% |
| 3471711 | 2004.1.1.495 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TRAPPC10_1st | 0.57 | 49.0 | 5.02e-01 | 100.0% | 94.0% |
| 3931009 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.56 | 45.0 | 4.78e-01 | 100.0% | 95.6% |
| 1397767 | 2002.1.1.18 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_10 | 0.55 | 45.0 | 3.95e-01 | 86.2% | 82.4% |
| 4163747 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.55 | 46.0 | 4.86e-01 | 100.0% | 97.8% |
| 1888684 | 2002.1.1.32 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Oxidored_FMN | 0.55 | 46.0 | 3.80e-01 | 90.1% | 84.6% |
| 4486883 | 2004.1.1.453 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1, NOG1 | 0.55 | 46.0 | 4.26e-01 | 100.0% | 71.0% |
| 3600191 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 46.0 | 4.45e-01 | 100.0% | 80.4% |
| 5077859 | 2002.1.1.12 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_1 | 0.54 | 41.0 | 3.69e-01 | 78.8% | 90.9% |
| 1289505 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.54 | 46.0 | 3.90e-01 | 91.6% | 95.8% |
| 4068546 | 2002.1.1.266 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF27526 | 0.54 | 49.0 | 3.83e-01 | 100.0% | 65.8% |
| 4431514 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.54 | 36.0 | 4.23e-01 | 99.0% | 98.6% |
| 3327473 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.53 | 27.0 | 3.50e-01 | 71.9% | 86.0% |
| 5026141 | 2487.1.1.18 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › Peptidase_S66C | 0.52 | 37.0 | 4.22e-01 | 92.6% | 96.7% |
| 3505081 | 2004.1.1.98 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad17 | 0.52 | 39.0 | 3.99e-01 | 76.4% | 86.2% |
| 4008577 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.52 | 46.0 | 4.20e-01 | 95.1% | 85.9% |
| 3494160 | 109.4.1.626 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TRAPPC9-Trs120 | 0.51 | 48.0 | 3.86e-01 | 100.0% | 58.7% |
| 5049407 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.51 | 47.0 | 4.71e-01 | 99.5% | 98.5% |
| 3302396 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.51 | 40.0 | 4.38e-01 | 97.5% | 98.2% |
| 4162179 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.51 | 38.0 | 4.23e-01 | 98.0% | 99.4% |
D3
medium
residues 438-523
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.63 | 44.0 | 4.61e-01 | 86.0% | 79.7% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.61 | 45.0 | 4.68e-01 | 89.5% | 84.8% |
| 4wz9A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.57 | 44.0 | 3.37e-01 | 86.0% | 47.7% |
| 1krlA00 | 6.20.50.130 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.56 | 30.0 | 3.78e-01 | 80.2% | 97.7% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.56 | 44.0 | 3.81e-01 | 86.0% | 90.6% |
| 3dpuB03 | 3.30.310.200 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.54 | 42.0 | 3.86e-01 | 82.6% | 70.4% |
| 3rlfF03 | 2.40.430.10 | Mainly Beta › Beta Barrel › Periplasmic binding protein-like II › D-maltodextrin-binding protein, MBP | 0.53 | 37.0 | 3.76e-01 | 73.3% | 73.9% |
| 3g16B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 37.0 | 3.11e-01 | 72.1% | 58.6% |
| 3s9cA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 39.0 | 3.51e-01 | 77.9% | 68.3% |
| 1mpgA01 | 3.30.310.20 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain | 0.53 | 41.0 | 3.78e-01 | 83.7% | 71.4% |
| 1lgpA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.52 | 37.0 | 3.40e-01 | 74.4% | 62.8% |
| 8a7dC01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 38.0 | 2.90e-01 | 79.1% | 55.1% |
| 2plqA00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.50 | 42.0 | 2.83e-01 | 93.0% | 43.5% |
| 7rpyA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 3.33e-01 | 73.3% | 95.1% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3708356 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.63 | 38.0 | 3.88e-01 | 88.4% | 61.2% |
| 3508683 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 43.0 | 3.69e-01 | 70.9% | 86.9% |
| 3680769 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 49.0 | 4.33e-01 | 88.4% | 70.8% |
| 4505406 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 48.0 | 4.63e-01 | 87.2% | 80.0% |
| 4025949 | 220.1.1.92 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH | 0.59 | 42.0 | 3.66e-01 | 73.3% | 80.0% |
| 3690254 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 48.0 | 4.76e-01 | 90.7% | 85.6% |
| 3094739 | 220.1.1.14 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom | 0.58 | 43.0 | 3.66e-01 | 77.9% | 82.9% |
| 3247934 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.58 | 45.0 | 4.43e-01 | 88.4% | 77.9% |
| 3929452 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.57 | 40.0 | 4.47e-01 | 94.2% | 96.9% |
| 4943290 | 236.3.1.1 ↗ | beta barrels › GroES-like › AF1531-like › AF1531-like › DUF655 | 0.55 | 29.0 | 2.98e-01 | 100.0% | 48.8% |
| 3729698 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.55 | 37.0 | 3.13e-01 | 70.9% | 85.3% |
| 3933019 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.53 | 35.0 | 3.97e-01 | 91.9% | 98.3% |
| 3509389 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.53 | 40.0 | 3.57e-01 | 83.7% | 81.5% |
| 3842053 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.52 | 39.0 | 2.90e-01 | 80.2% | 56.2% |
| 3253615 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 38.0 | 3.51e-01 | 88.4% | 59.1% |
| 3243787 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 35.0 | 3.50e-01 | 70.9% | 92.2% |
| 3356297 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.52 | 39.0 | 3.46e-01 | 90.7% | 53.8% |
| 3940305 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 35.0 | 2.69e-01 | 70.9% | 92.7% |