←Back to structures
MK295203.1__AZV00923.1__vBEcoM005_036__00036
Bact-VirMK295203.1__AZV00923.1__vBEcoM005_036__00036
Identity
- Accession:
- MK295203 ↗
- Kingdom:
- phage
Quality
79.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Dhakavirus›
Escherichia_phage_vB_EcoM_005
TaxID: 2500761
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-92
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11110.13 best | Phage_hub_GP28 | 65.1 | 1.00e-17 | 61.5% | 31.2% |
| PF11110.13 | Phage_hub_GP28 | 30.9 | 3.30e-07 | 42.2% | 20.8% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tbxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 28.0 | 2.73e-01 | 100.0% | 33.3% |
| 5jpoD01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 41.0 | 4.19e-01 | 100.0% | 87.8% |
| 5df7A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.53 | 43.0 | 2.92e-01 | 91.6% | 94.2% |
| 1b48A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 38.0 | 3.67e-01 | 100.0% | 70.8% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3606775 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.61 | 49.0 | 3.36e-01 | 100.0% | 24.7% |
| 4083057 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.54 | 25.0 | 3.05e-01 | 95.2% | 66.0% |
| 3386234 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 26.0 | 3.26e-01 | 84.3% | 100.0% |
| 4304965 | 602.1.1.1 ↗ | alpha arrays › L-aspartase middle domain-like › L-aspartase middle domain-like › L-aspartase middle domain-like › Lyase_1 | 0.50 | 44.0 | 3.03e-01 | 100.0% | 33.8% |