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MK295205.1__AZV01465.1__vBSflM004_076__00076
Bact-VirMK295205.1__AZV01465.1__vBSflM004_076__00076
Identity
- Accession:
- MK295205 ↗
- Kingdom:
- phage
Quality
70.9
mean pLDDT
Taxonomy
TaxID: 2500763
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-46
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ywlA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.71 | 48.0 | 3.22e-01 | 71.1% | 54.7% |
| 4zn0A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.71 | 48.0 | 3.27e-01 | 71.1% | 47.5% |
| 3oc4A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.70 | 48.0 | 3.56e-01 | 73.3% | 92.5% |
| 2ot9A01 | 3.10.640.10 | Alpha Beta › Roll › Restriction endonuclease-like alpha-beta roll fold › Restriction endonuclease-like alpha-beta roll domain | 0.69 | 48.0 | 3.19e-01 | 73.3% | 92.0% |
| 3lovA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.69 | 46.0 | 3.22e-01 | 71.1% | 40.8% |
| 4amcA01 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.67 | 46.0 | 4.60e-01 | 73.3% | 71.7% |
| 1sbxA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.66 | 56.0 | 4.35e-01 | 100.0% | 84.0% |
| 3ip3A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.66 | 46.0 | 2.89e-01 | 73.3% | 66.5% |
| 5ixcA01 | 3.40.1090.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytosolic phospholipase A2 catalytic domain › Cytosolic phospholipase A2 catalytic domain | 0.64 | 50.0 | 2.90e-01 | 88.9% | 72.3% |
| 2g3wA00 | 3.10.640.10 | Alpha Beta › Roll › Restriction endonuclease-like alpha-beta roll fold › Restriction endonuclease-like alpha-beta roll domain | 0.64 | 43.0 | 2.96e-01 | 73.3% | 91.1% |
| 1zx5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 49.0 | 3.18e-01 | 86.7% | 35.5% |
| 1dq3A02 | 3.30.160.90 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 52.0 | 4.48e-01 | 100.0% | 85.5% |
| 1upsA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.62 | 48.0 | 3.46e-01 | 86.7% | 48.9% |
| 4gp0B02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.60 | 46.0 | 3.46e-01 | 86.7% | 43.9% |
| 4zwnB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 47.0 | 2.87e-01 | 88.9% | 91.6% |
| 2eyzA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 41.0 | 3.32e-01 | 71.1% | 50.5% |
| 3oymA01 | 1.10.340.70 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.60 | 50.0 | 4.06e-01 | 100.0% | 76.3% |
| 2yyzA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.59 | 43.0 | 4.01e-01 | 77.8% | 79.3% |
| 5vmzA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.59 | 39.0 | 4.16e-01 | 88.9% | 79.5% |
| 6bioA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 42.0 | 3.99e-01 | 80.0% | 94.7% |
| 4gp3A03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.58 | 45.0 | 3.37e-01 | 86.7% | 48.4% |
| 1yqeA01 | 3.40.630.50 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › AF0625-like | 0.58 | 43.0 | 2.90e-01 | 82.2% | 97.8% |
| 2xi9B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 43.0 | 3.33e-01 | 80.0% | 77.6% |
| 2bzyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 39.0 | 3.57e-01 | 77.8% | 51.6% |
| 6ptrB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.57 | 39.0 | 3.03e-01 | 73.3% | 90.3% |
| 1zuyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 41.0 | 3.87e-01 | 80.0% | 87.9% |
| 1q25A03 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.56 | 43.0 | 3.10e-01 | 86.7% | 84.4% |
| 6g6qA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 38.0 | 2.78e-01 | 75.6% | 38.9% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.54 | 47.0 | 3.41e-01 | 100.0% | 37.9% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.54 | 44.0 | 3.27e-01 | 97.8% | 61.6% |
| 5gaeG01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.54 | 43.0 | 3.58e-01 | 88.9% | 85.2% |
| 4qa8A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.54 | 43.0 | 2.94e-01 | 100.0% | 91.4% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 37.0 | 3.37e-01 | 75.6% | 50.7% |
| 1u0lA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 36.0 | 3.38e-01 | 73.3% | 89.1% |
| 2lydA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 43.0 | 3.19e-01 | 95.6% | 52.2% |
| 1vq8E01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.54 | 42.0 | 3.57e-01 | 88.9% | 87.3% |
| 5mmiG01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.54 | 41.0 | 3.47e-01 | 88.9% | 83.3% |
| 1h54A03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.53 | 39.0 | 3.28e-01 | 77.8% | 98.6% |
| 4oj5B01 | 3.30.2020.50 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.53 | 36.0 | 3.15e-01 | 75.6% | 61.0% |
| 3fvcA01 | 2.30.30.1230 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 37.0 | 3.23e-01 | 80.0% | 60.0% |
| 3igfA02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 40.0 | 3.44e-01 | 86.7% | 70.3% |
| 3ihpA03 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 39.0 | 2.41e-01 | 80.0% | 11.0% |
| 4a17E01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.51 | 43.0 | 3.60e-01 | 100.0% | 89.4% |
| 1vx7H01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.50 | 39.0 | 3.42e-01 | 100.0% | 90.6% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3406773 | 241.10.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain › GAS2 | 0.78 | 65.0 | 5.62e-01 | 100.0% | 60.0% |
| 3715657 | 241.10.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain | 0.77 | 62.0 | 4.82e-01 | 91.1% | 49.5% |
| 3935730 | 241.10.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain › GAS2 | 0.74 | 63.0 | 5.09e-01 | 100.0% | 48.9% |
| 3731030 | 241.10.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain › GAS2 | 0.73 | 62.0 | 4.59e-01 | 97.8% | 42.5% |
| 5040518 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 50.0 | 4.84e-01 | 73.3% | 88.0% |
| 3481690 | 241.10.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain › GAS2 | 0.72 | 60.0 | 4.88e-01 | 100.0% | 50.0% |
| 11042 | 2008.1.1.25 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YaeQ | 0.69 | 48.0 | 3.18e-01 | 73.3% | 90.5% |
| None | — | 0.68 | 47.0 | 2.79e-01 | 73.3% | 50.4% | |
| 4454944 | 101.1.2.468 ↗ | alpha arrays › HTH › HTH › winged helix domain › McbB | 0.66 | 48.0 | 4.02e-01 | 80.0% | 88.7% |
| 4447285 | 331.1.1.6 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 | 0.65 | 41.0 | 3.57e-01 | 73.3% | 40.0% |
| 4988664 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 51.0 | 4.38e-01 | 88.9% | 78.7% |
| 3627795 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 47.0 | 3.86e-01 | 80.0% | 61.2% |
| 3961639 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.64 | 43.0 | 3.95e-01 | 71.1% | 85.0% |
| 5035419 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.64 | 44.0 | 2.68e-01 | 73.3% | 21.0% |
| 4031064 | 4999.1.1.0 ↗ | beta barrels › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX, C-terminal domain-like | 0.64 | 46.0 | 4.38e-01 | 88.9% | 65.5% |
| 3635644 | 319.1.1.14 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HECT_2 | 0.64 | 44.0 | 3.32e-01 | 73.3% | 45.5% |
| 2132 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.62 | 48.0 | 3.48e-01 | 86.7% | 49.6% |
| 5052895 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 42.0 | 3.95e-01 | 73.3% | 61.8% |
| 5036111 | 213.1.1.31 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 | 0.60 | 44.0 | 3.07e-01 | 80.0% | 80.6% |
| 2051596 | 2007.1.14.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Peripla_BP_2 | 0.60 | 43.0 | 3.09e-01 | 80.0% | 35.8% |
| 865123 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.60 | 50.0 | 3.83e-01 | 100.0% | 64.0% |
| 3930224 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 44.0 | 4.30e-01 | 84.4% | 82.0% |
| 4001239 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 43.0 | 3.47e-01 | 80.0% | 75.8% |
| 3967552 | 375.1.1.71 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF2387 | 0.59 | 41.0 | 4.17e-01 | 73.3% | 84.4% |
| 3869223 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.57 | 41.0 | 3.51e-01 | 82.2% | 45.0% |
| 3566388 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.57 | 40.0 | 4.14e-01 | 80.0% | 81.4% |
| 4989374 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.56 | 45.0 | 3.72e-01 | 91.1% | 80.0% |
| 3520914 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.56 | 39.0 | 2.13e-01 | 73.3% | 8.1% |
| 4940325 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.56 | 36.0 | 3.41e-01 | 73.3% | 46.7% |
| 3930081 | 386.1.1.251 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7381 | 0.56 | 41.0 | 4.21e-01 | 86.7% | 100.0% |
| 3404585 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 40.0 | 3.93e-01 | 82.2% | 86.0% |
| 4174140 | 318.1.1.0 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 | 0.56 | 43.0 | 3.69e-01 | 88.9% | 91.3% |
| 4939990 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.55 | 45.0 | 2.80e-01 | 95.6% | 40.4% |
| 4100425 | 11.1.4.90 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF4550 | 0.55 | 43.0 | 3.32e-01 | 100.0% | 82.3% |
| 4413978 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.54 | 38.0 | 2.46e-01 | 77.8% | 30.8% |
| 3901202 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.54 | 37.0 | 3.87e-01 | 77.8% | 82.5% |
| 5061081 | 375.1.1.83 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB | 0.54 | 38.0 | 3.73e-01 | 75.6% | 68.0% |
| 4456820 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.54 | 44.0 | 3.66e-01 | 88.9% | 86.3% |
| 3927790 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 41.0 | 4.18e-01 | 93.3% | 95.6% |
| None | — | 0.53 | 38.0 | 2.46e-01 | 82.2% | 29.2% | |
| 3924908 | 386.1.1.251 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7381 | 0.53 | 40.0 | 3.19e-01 | 86.7% | 67.0% |
| 4467867 | 3784.1.1.0 ↗ | a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related | 0.53 | 41.0 | 2.94e-01 | 88.9% | 87.6% |
| 4437258 | 4.1.1.178 ↗ | beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 | 0.52 | 35.0 | 2.79e-01 | 73.3% | 97.4% |
| 3924284 | 2484.1.1.175 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N+FGGY_C | 0.52 | 43.0 | 2.45e-01 | 100.0% | 45.3% |
| 3924841 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.52 | 37.0 | 2.41e-01 | 77.8% | 54.7% |
| 3500033 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 35.0 | 3.45e-01 | 71.1% | 74.0% |
| 3494671 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 37.0 | 3.73e-01 | 77.8% | 77.8% |
| 4989647 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.51 | 36.0 | 3.45e-01 | 77.8% | 67.3% |
| 3916099 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.50 | 37.0 | 2.68e-01 | 93.3% | 65.6% |
| 3585826 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 35.0 | 3.60e-01 | 80.0% | 97.5% |