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MK308676.1__QAX96837.1__X__00211

Bact-Vir

MK308676.1__QAX96837.1__X__00211

Identity

Accession:
MK308676 ↗
Kingdom:
phage

Quality

88.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_vB_VmeM-Yong_MS31

TaxID: 2500764

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-188
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF02743.25 best dCache_1 75.4 7.20e-21 83.2% 67.1%
PF22673.3 MCP-like_PDC_1 36.3 9.40e-09 62.7% 92.0%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lifB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.85 64.0 7.28e-01 76.8% 100.0%
3licA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.85 69.0 7.11e-01 84.3% 100.0%
4ywzB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.83 61.0 6.91e-01 75.1% 100.0%
3by8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.79 56.0 6.52e-01 73.0% 100.0%
1p0zA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.77 54.0 6.32e-01 74.6% 100.0%
3c8cB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.69 46.0 5.41e-01 72.4% 96.9%
4exoA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.69 50.0 5.55e-01 74.1% 100.0%
2d42A02 3.10.450.380 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 22.0 3.58e-01 70.3% 93.8%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1627069 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.95 75.0 8.29e-01 80.0% 100.0%
3965983 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.93 76.0 6.85e-01 84.3% 65.0%
5045649 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.92 71.0 6.58e-01 78.9% 100.0%
5013242 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.91 74.0 7.72e-01 82.7% 100.0%
4647063 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.90 78.0 7.10e-01 89.2% 74.0%
3386304 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.90 71.0 7.48e-01 81.6% 100.0%
4328158 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.89 63.0 7.47e-01 71.9% 100.0%
2895578 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.89 64.0 7.47e-01 74.1% 100.0%
4199524 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.88 75.0 6.83e-01 87.6% 70.2%
1713365 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.88 72.0 7.54e-01 83.8% 98.2%
3387810 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.88 74.0 6.57e-01 85.9% 97.1%
None — 0.88 75.0 6.67e-01 87.6% 66.9%
4098695 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.87 74.0 6.64e-01 87.6% 67.3%
1870821 223.1.1.49 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › HK-GC-Chemotax_sensor 0.87 66.0 7.47e-01 77.3% 100.0%
4944565 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.87 60.0 6.54e-01 70.3% 100.0%
2472915 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.87 72.0 6.18e-01 84.9% 70.3%
4593431 223.1.1.67 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › CHASE7 0.87 63.0 6.00e-01 74.1% 100.0%
1005116 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.86 73.0 6.94e-01 87.0% 76.7%
4928264 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.86 67.0 6.14e-01 86.5% 63.2%
2543665 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.85 69.0 7.15e-01 82.7% 100.0%
4927644 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.85 62.0 7.05e-01 74.1% 100.0%
2463709 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.85 69.0 7.47e-01 83.2% 97.5%
352473 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.85 68.0 6.02e-01 82.7% 99.6%
4928212 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.85 63.0 6.18e-01 79.5% 71.2%
4927092 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.85 68.0 6.00e-01 83.2% 68.3%
139131 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.84 69.0 7.09e-01 84.3% 100.0%
2524055 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.84 67.0 5.84e-01 82.2% 70.8%
1673308 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.84 66.0 6.88e-01 80.5% 100.0%
2325680 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.84 70.0 5.83e-01 86.5% 71.7%
4988027 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.83 71.0 5.96e-01 88.6% 68.5%
4008146 223.1.1.70 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAPES1 0.83 64.0 5.53e-01 78.9% 100.0%
4008916 223.1.1.103 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › CHASE7, PF30448 0.83 76.0 5.98e-01 96.2% 69.7%
4949373 223.1.1.49 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › HK-GC-Chemotax_sensor 0.83 71.0 6.30e-01 89.2% 65.0%
4135073 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.83 78.0 6.79e-01 100.0% 94.1%
4184400 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.82 57.0 6.81e-01 71.9% 100.0%
4066540 223.1.1.134 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PF30516 0.82 72.0 7.15e-01 90.3% 90.0%
2855513 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.82 71.0 5.83e-01 90.3% 69.3%
4963926 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.82 57.0 6.12e-01 70.3% 100.0%
3973449 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.82 68.0 6.07e-01 86.5% 97.6%
3514951 223.1.1.102 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › VWA_N, PF30670 0.82 63.0 5.27e-01 79.5% 63.4%
2771755 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.81 67.0 7.11e-01 84.9% 100.0%
4007550 223.1.1.162 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PF30420 0.81 69.0 6.80e-01 89.2% 91.8%
2855566 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.80 61.0 6.23e-01 78.4% 99.4%
4045675 223.1.1.81 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Cache_WalK 0.79 70.0 6.78e-01 91.4% 88.5%
4260224 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.79 56.0 6.34e-01 72.4% 97.9%
3914648 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.78 54.0 4.89e-01 83.2% 54.5%
1613274 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.78 63.0 6.83e-01 83.2% 100.0%
3788468 223.1.1.75 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › HAMP 0.78 74.0 5.55e-01 100.0% 53.2%
3937995 223.1.1.138 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › VWA_N, VGCC_alpha2 0.78 62.0 4.02e-01 81.6% 49.0%
3282879 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.77 69.0 6.76e-01 94.1% 88.5%
4453642 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.77 57.0 5.87e-01 83.8% 80.0%
3587963 223.1.1.35 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_2 0.76 54.0 5.85e-01 73.0% 83.7%
3882596 223.1.1.101 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PF30734 0.76 57.0 4.91e-01 76.2% 57.8%
3515472 223.1.1.101 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PF30734 0.76 56.0 4.86e-01 74.6% 77.2%
3861461 223.1.1.98 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PF30670 0.75 61.0 5.03e-01 83.2% 63.3%
3282901 223.1.1.35 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_2 0.75 63.0 5.06e-01 88.6% 47.7%
3921321 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.75 57.0 4.69e-01 78.4% 51.7%
4008035 223.1.1.112 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PF30417 0.75 60.0 5.24e-01 84.3% 99.3%
3944684 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.74 63.0 6.22e-01 88.6% 92.8%
3839137 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.74 55.0 5.79e-01 75.1% 98.2%
3387976 223.1.1.51 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.74 54.0 6.08e-01 74.6% 99.3%
3978937 223.1.1.35 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_2 0.74 63.0 6.18e-01 88.6% 92.8%
3954468 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.72 60.0 6.03e-01 87.0% 94.7%
5082808 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.72 58.0 3.63e-01 84.3% 19.6%
3967946 223.1.1.97 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_2 0.72 56.0 5.90e-01 80.5% 100.0%
3971891 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.71 66.0 5.60e-01 98.9% 97.6%
3415240 223.1.1.101 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PF30734 0.71 57.0 5.08e-01 84.3% 65.8%
3587852 223.1.1.33 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_like 0.70 60.0 6.06e-01 90.3% 90.8%
4952012 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.62 57.0 4.79e-01 100.0% 65.6%
D2 medium residues 189-248
PDB
Domain cluster: representative
CATH (68)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1d06A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.85 76.0 5.79e-01 96.7% 80.8%
3mjqA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.82 72.0 5.88e-01 96.7% 93.5%
7xlqD01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.80 72.0 5.54e-01 100.0% 82.9%
6hmjA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.71 63.0 5.25e-01 100.0% 98.1%
4fomA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 48.0 4.06e-01 98.3% 44.4%
4bfeA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 46.0 4.22e-01 98.3% 53.1%
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 46.0 4.05e-01 98.3% 48.9%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.67 47.0 3.87e-01 100.0% 40.5%
4ofyD02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 48.0 3.96e-01 98.3% 44.9%
4bfiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 47.0 4.12e-01 98.3% 52.2%
2fh5A01 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.63 56.0 4.41e-01 100.0% 53.3%
2di8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 45.0 3.90e-01 98.3% 50.0%
4of8A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 47.0 3.92e-01 100.0% 48.5%
3duwA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 51.0 3.52e-01 96.7% 28.3%
3mjgX03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 47.0 3.95e-01 98.3% 50.5%
4dmzA02 3.30.70.2880 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 45.0 3.51e-01 100.0% 35.8%
3pr6A00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.60 52.0 3.97e-01 100.0% 58.6%
2ogkD00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.60 48.0 3.75e-01 100.0% 38.7%
2wnyA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.60 46.0 3.60e-01 98.3% 38.0%
3e23A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 53.0 3.68e-01 100.0% 35.4%
4d6gA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.59 42.0 3.33e-01 76.7% 63.1%
3d8dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 44.0 3.46e-01 83.3% 74.8%
6x4tA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 45.0 4.06e-01 98.3% 60.0%
2wmfA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.58 43.0 3.47e-01 81.7% 66.7%
1fthA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.58 46.0 3.92e-01 96.7% 98.3%
5a2fA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 47.0 3.81e-01 98.3% 48.2%
3hzhB00 3.40.1550.10 Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like 0.57 46.0 3.58e-01 96.7% 72.1%
3qw9B00 2.60.40.4100 Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-C domain 0.57 49.0 3.59e-01 98.3% 44.0%
1mhmA00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.57 47.0 3.18e-01 96.7% 69.6%
2nrqA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.57 44.0 3.49e-01 100.0% 39.4%
3o4oB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 47.0 3.88e-01 98.3% 51.4%
6mv2A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 49.0 4.15e-01 98.3% 70.6%
4nehA04 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.56 45.0 3.35e-01 100.0% 34.4%
1njhA00 2.70.180.10 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › Hypothetical protein YojF 0.56 42.0 3.62e-01 86.7% 75.0%
2vqeC02 3.30.1140.32 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain 0.56 49.0 4.15e-01 98.3% 59.0%
2p4gA00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.55 44.0 2.92e-01 96.7% 21.4%
2ednA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 48.0 3.83e-01 98.3% 49.2%
4bs9A03 3.30.1330.230 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 0.55 45.0 3.53e-01 96.7% 55.2%
3pm9A04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 45.0 4.05e-01 100.0% 65.5%
3u83A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 38.0 3.39e-01 98.3% 46.5%
4pbdA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 47.0 3.98e-01 98.3% 68.6%
3nr5A00 3.40.1000.50 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Repressor of RNA polymerase III transcription Maf1 0.54 47.0 3.46e-01 98.3% 84.7%
3onrJ00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.54 45.0 4.34e-01 95.0% 82.4%
4of0A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 47.0 3.69e-01 98.3% 58.1%
5f1cA02 2.60.490.10 Mainly Beta › Sandwich › atp-gated p2x4 ion channel fold › atp-gated p2x4 ion channel domain 0.53 41.0 2.73e-01 88.3% 28.2%
4ushA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 45.0 3.87e-01 100.0% 78.6%
1x8dA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 48.0 3.98e-01 96.7% 60.8%
1omsA00 3.30.70.1050 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain 0.53 46.0 3.71e-01 96.7% 90.4%
3hrgA01 3.30.420.250 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, N-terminal domain 0.53 45.0 3.49e-01 100.0% 76.2%
2petA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 46.0 3.72e-01 98.3% 50.9%
1hw7A01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.53 42.0 3.23e-01 98.3% 90.8%
2k8qA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 45.0 3.54e-01 98.3% 53.0%
1opoA02 2.60.40.1780 Mainly Beta › Sandwich › Immunoglobulin-like › Carmovirus coat protein 0.52 44.0 3.71e-01 95.0% 98.1%
2yweA03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.52 38.0 3.52e-01 98.3% 59.8%
6hhnA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 47.0 4.05e-01 98.3% 64.1%
3zxoA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 41.0 3.36e-01 100.0% 44.0%
1ekrA00 3.30.70.640 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Molybdopterin cofactor biosynthesis C (MoaC) domain 0.52 45.0 3.44e-01 98.3% 55.2%
7k0xA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 37.0 3.52e-01 96.7% 62.8%
1vknA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 47.0 3.31e-01 98.3% 42.4%
6iomB01 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.51 36.0 3.42e-01 98.3% 61.0%
2b59A00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 43.0 3.21e-01 100.0% 71.1%
3ledA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.51 43.0 3.25e-01 98.3% 96.8%
2ozpA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 46.0 3.26e-01 98.3% 45.5%
1yqsA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.50 41.0 2.56e-01 90.0% 87.2%
1fp5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 39.0 3.39e-01 98.3% 53.0%
2dpnA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 36.0 2.55e-01 81.7% 74.6%
3jamD02 3.30.1140.32 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain 0.50 41.0 3.31e-01 98.3% 71.4%
1tyjA00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 43.0 3.17e-01 100.0% 38.8%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4963925 3488.1.1.5 ↗ a+b three layers › Putative sensor histidine kinase domain › Putative sensor histidine kinase domain › Putative sensor histidine kinase domain › Cache_3-Cache_2 0.87 80.0 5.59e-01 100.0% 54.9%
4230053 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.82 69.0 4.68e-01 95.0% 27.7%
3278760 223.1.1.36 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD 0.81 72.0 5.15e-01 98.3% 88.8%
3268309 223.1.1.8 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › CHASE 0.76 68.0 4.28e-01 100.0% 21.3%
3164706 223.1.1.58 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › 2CSK_N 0.73 67.0 5.20e-01 100.0% 53.6%
4047545 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.71 64.0 4.68e-01 100.0% 41.9%
1220114 11.1.1.363 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.71 48.0 3.33e-01 100.0% 22.8%
3508716 223.2.1.7 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.68 62.0 4.70e-01 100.0% 57.0%
3885837 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 48.0 4.14e-01 98.3% 47.4%
3432113 223.2.1.7 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.67 61.0 4.72e-01 100.0% 62.4%
3482975 223.2.1.7 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.67 60.0 4.69e-01 100.0% 59.2%
4028560 223.2.1.9 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N 0.66 59.0 4.46e-01 100.0% 67.1%
3267300 223.2.1.7 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.66 61.0 4.62e-01 100.0% 56.2%
5077954 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 58.0 4.49e-01 100.0% 60.8%
3931143 223.2.1.7 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.64 58.0 4.52e-01 100.0% 59.2%
3271953 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 57.0 4.38e-01 100.0% 60.0%
5028044 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.63 58.0 4.50e-01 100.0% 56.5%
3244878 864.1.1.5 ↗ a+b two layers › DLC › DLC › DLC › DUF684 0.61 44.0 3.94e-01 98.3% 54.1%
3303600 2003.1.5.121 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF1442 0.61 48.0 3.39e-01 100.0% 27.4%
3388457 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.61 48.0 4.02e-01 100.0% 51.0%
5019419 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.59 50.0 3.92e-01 93.3% 50.4%
3921959 11.1.1.363 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.59 44.0 3.84e-01 100.0% 51.6%
3980760 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 53.0 3.82e-01 100.0% 37.0%
4960709 882.1.1.4 ↗ a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.59 45.0 3.52e-01 100.0% 37.1%
4932565 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.58 48.0 4.20e-01 98.3% 60.0%
1144736 12.2.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Glyco_hydro_98C 0.58 43.0 3.21e-01 81.7% 74.1%
3898330 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.58 43.0 3.63e-01 100.0% 46.7%
1930620 1133.1.1.0 ↗ beta sandwiches › Immunomodulator A46 N-terminal domain › Immunomodulator A46 N-terminal domain › Immunomodulator A46 N-terminal domain 0.58 50.0 4.65e-01 98.3% 89.5%
3968365 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.57 49.0 3.66e-01 100.0% 40.6%
4986703 882.1.1.4 ↗ a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.57 44.0 3.44e-01 100.0% 37.1%
4948152 256.1.1.0 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like 0.57 48.0 4.64e-01 95.0% 81.4%
4995124 882.1.1.4 ↗ a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.57 43.0 3.41e-01 100.0% 37.1%
3391269 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.57 51.0 4.12e-01 100.0% 55.7%
235716 7501.1.1.2 ↗ a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C 0.56 45.0 3.10e-01 96.7% 25.5%
4028203 230.2.1.1 ↗ a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C 0.56 47.0 4.02e-01 98.3% 57.6%
4945087 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 42.0 3.56e-01 100.0% 47.6%
3797452 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.56 46.0 3.58e-01 98.3% 40.7%
3867811 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.55 48.0 3.78e-01 100.0% 46.4%
3850546 1095.1.1.2 ↗ extended segments › Copper resistance protein ScsC N-terminal region › Copper resistance protein ScsC N-terminal region › Copper resistance protein ScsC N-terminal region › CATSPERG_Ig-like 0.55 48.0 3.56e-01 98.3% 41.2%
3889150 11.1.1.596 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › VEGFR-1-like_5th 0.55 48.0 3.82e-01 98.3% 62.4%
4053989 304.9.1.71 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SNU71_RBD 0.55 48.0 3.67e-01 98.3% 50.0%
3614271 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 40.0 3.22e-01 81.7% 74.1%
3471366 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 50.0 3.87e-01 100.0% 52.0%
3893006 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 47.0 3.90e-01 98.3% 54.3%
3249540 230.2.1.1 ↗ a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C 0.54 48.0 3.95e-01 100.0% 56.4%
3864149 11.1.1.805 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_PDGFR_d4 0.54 49.0 3.69e-01 100.0% 45.7%
2324017 3019.1.1.0 ↗ beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain 0.54 45.0 3.73e-01 100.0% 86.1%
3877215 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.54 47.0 3.07e-01 98.3% 22.7%
3823551 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 47.0 3.51e-01 96.7% 44.1%
3525146 3450.1.1.0 ↗ alpha arrays › Myosin-binding motif (m-domain) C-terminal subdomain › Myosin-binding motif (m-domain) C-terminal subdomain › Myosin-binding motif (m-domain) C-terminal subdomain 0.53 46.0 2.84e-01 98.3% 15.7%
4419546 11.1.5.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Cohesin 0.53 46.0 2.68e-01 100.0% 20.9%
4155930 11.1.5.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Cohesin 0.53 46.0 3.19e-01 100.0% 32.4%
4505312 230.2.1.2 ↗ a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › VAR1 0.53 45.0 3.90e-01 95.0% 67.4%
3904304 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.53 43.0 3.49e-01 100.0% 45.8%
4469841 230.2.1.1 ↗ a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C 0.53 44.0 3.80e-01 93.3% 58.9%
3748592 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.52 45.0 3.61e-01 100.0% 47.2%
3473930 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 45.0 3.59e-01 98.3% 58.4%
3273101 11.1.1.912 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28397 0.52 46.0 3.64e-01 98.3% 57.5%
4944581 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 38.0 3.43e-01 100.0% 53.7%
3251331 11.1.5.109 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PF28397 0.52 46.0 3.22e-01 98.3% 36.8%
3879276 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.52 41.0 3.35e-01 96.7% 60.7%
3259689 11.1.5.109 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PF28397 0.52 45.0 3.49e-01 98.3% 50.4%
4995882 3501.1.1.1 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.51 39.0 3.71e-01 98.3% 69.3%
3931456 304.42.1.1 ↗ a+b two layers › Alpha-beta plaits › Molybdenum cofactor biosynthesis protein C, MoaC › Molybdenum cofactor biosynthesis protein C, MoaC › MoaC 0.51 46.0 3.33e-01 100.0% 76.5%
3266782 11.1.1.912 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28397 0.51 45.0 3.22e-01 98.3% 37.1%
2841942 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.51 43.0 3.67e-01 98.3% 74.3%
3233808 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 40.0 3.33e-01 96.7% 66.9%
3352390 5.1.4.508 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30952 0.50 42.0 2.74e-01 98.3% 19.3%
3891278 11.1.1.589 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NUP210_Ig 0.50 43.0 3.41e-01 98.3% 60.0%
41310 11.1.5.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Cohesin 0.50 43.0 3.17e-01 100.0% 38.8%
D3 medium residues 367-430_546-604
PDB
Domain cluster: representative
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3g67A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.95 92.0 7.37e-01 100.0% 79.3%
2ch7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.90 85.0 6.13e-01 100.0% 81.9%
1qu7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.89 85.0 6.74e-01 100.0% 80.6%
1xwmA00 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.85 40.0 3.22e-01 92.7% 26.4%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.84 40.0 4.22e-01 91.1% 51.8%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.83 45.0 4.70e-01 88.6% 57.3%
3agtA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.82 39.0 3.79e-01 78.9% 42.1%
3vkgA02 1.20.140.100 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Dynein motor heavy chain, linker domain, N-terminal subdomain 0.82 43.0 4.06e-01 88.6% 43.5%
1wrdA00 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 37.0 4.16e-01 79.7% 55.1%
2b5uA02 1.10.287.620 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins 0.80 62.0 5.64e-01 80.5% 83.9%
4ioeA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.77 45.0 5.25e-01 87.8% 81.6%
2lm9A00 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 39.0 4.41e-01 78.9% 62.5%
4nqiD00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.77 72.0 5.69e-01 99.2% 55.2%
2rd0B00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.76 56.0 5.41e-01 76.4% 91.4%
7p3rA01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.75 70.0 5.03e-01 100.0% 42.8%
2cmrA00 1.20.58.1860 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 43.0 3.66e-01 84.6% 35.9%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.73 41.0 4.50e-01 76.4% 66.7%
3vkgA12 1.10.287.2610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.73 65.0 5.36e-01 95.9% 85.1%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.72 42.0 4.47e-01 74.0% 65.4%
1i4dA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.72 56.0 4.78e-01 80.5% 74.5%
3zciA00 1.20.58.1660 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 52.0 4.41e-01 81.3% 48.2%
1nafA02 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 36.0 4.27e-01 70.7% 70.6%
4nswB01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.71 58.0 4.50e-01 85.4% 52.3%
8ek4A01 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.71 44.0 4.28e-01 89.4% 56.4%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.70 42.0 4.58e-01 79.7% 70.9%
4mh6A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.70 62.0 5.69e-01 96.7% 82.4%
1t98A02 1.20.58.590 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain 0.70 41.0 3.69e-01 96.7% 42.9%
3edvB01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 48.0 4.67e-01 95.9% 64.0%
4ke2A00 6.10.140.1860 Special › Helix non-globular › Helix Hairpins › 0.69 62.0 5.33e-01 99.2% 82.1%
3ofnY00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.68 53.0 5.46e-01 100.0% 86.1%
2qe7G01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.68 50.0 5.56e-01 75.6% 100.0%
2q12A00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.68 54.0 4.31e-01 96.7% 43.0%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 39.0 4.86e-01 78.9% 97.2%
4im0A04 1.20.1270.420 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.68 58.0 4.59e-01 91.1% 60.9%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.66 46.0 4.87e-01 72.4% 78.6%
3k29A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 57.0 5.23e-01 93.5% 91.9%
1hs7A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 36.0 4.00e-01 74.0% 67.0%
3syvA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.64 53.0 4.19e-01 87.8% 46.1%
2hydA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.63 46.0 3.44e-01 94.3% 29.1%
1j1jA02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.63 30.0 3.52e-01 74.8% 61.2%
6iknD01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.62 55.0 4.29e-01 98.4% 58.4%
3i2wA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.62 51.0 3.96e-01 87.8% 43.8%
2qr4A01 1.20.140.70 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Oligopeptidase f, N-terminal domain 0.61 34.0 3.18e-01 81.3% 41.0%
5y06A01 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 49.0 3.91e-01 83.7% 92.1%
1y1uA01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.60 48.0 4.10e-01 85.4% 53.3%
2ficB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.60 49.0 4.17e-01 87.8% 57.2%
1wpaA01 6.10.140.340 Special › Helix non-globular › Helix Hairpins › 0.59 35.0 3.90e-01 78.9% 72.7%
4q4hA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.58 47.0 3.45e-01 85.4% 33.6%
4hehA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.58 28.0 3.29e-01 76.4% 63.9%
3h3mA00 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.56 30.0 3.45e-01 87.8% 68.5%
3r6nB01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 51.0 4.18e-01 100.0% 72.3%
3ajwA00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 50.0 4.94e-01 100.0% 91.0%
1cnt200 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.56 44.0 4.34e-01 81.3% 95.4%
2yfaA02 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.52 39.0 4.01e-01 77.2% 97.4%
3zdqA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.51 46.0 3.38e-01 100.0% 98.8%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5007124 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.96 93.0 6.76e-01 100.0% 67.9%
3386594 3291.1.1.197 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › MCPsignal 0.80 57.0 6.23e-01 82.1% 85.7%
3843224 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.80 65.0 5.07e-01 84.6% 80.8%
3207855 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.79 58.0 5.41e-01 76.4% 98.0%
3358852 3755.4.1.62 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PF31016 0.78 58.0 5.36e-01 77.2% 77.4%
4206235 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.78 68.0 5.30e-01 93.5% 92.5%
3766182 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.78 59.0 5.62e-01 79.7% 95.9%
3916825 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.77 62.0 5.75e-01 83.7% 90.0%
3251434 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.76 61.0 5.33e-01 83.7% 80.0%
5062807 1203.1.2.0 ↗ alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 0.76 60.0 4.01e-01 82.1% 81.3%
3165834 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.76 68.0 5.25e-01 95.9% 93.8%
3867942 3755.3.1.303 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A_4th 0.76 63.0 5.04e-01 88.6% 82.6%
3686252 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.76 56.0 4.69e-01 76.4% 65.5%
3704105 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.75 60.0 5.49e-01 84.6% 92.5%
3949633 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.75 68.0 5.77e-01 99.2% 77.5%
4392204 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.75 62.0 5.06e-01 87.8% 70.9%
3634628 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.74 56.0 3.86e-01 78.9% 34.6%
3599997 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 68.0 4.01e-01 99.2% 77.1%
3598025 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.74 47.0 4.14e-01 87.8% 45.9%
3942242 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.74 63.0 6.02e-01 90.2% 79.3%
3889547 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.73 65.0 5.63e-01 96.7% 78.9%
3739544 2004.1.1.433 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.73 56.0 3.46e-01 79.7% 19.0%
4001186 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.73 61.0 5.22e-01 87.8% 89.5%
4992667 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.73 63.0 4.77e-01 91.1% 54.2%
3706526 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.73 56.0 5.21e-01 79.7% 84.7%
4177363 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.73 54.0 5.11e-01 76.4% 100.0%
4969098 3926.1.1.0 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D 0.73 58.0 5.11e-01 83.7% 97.7%
3656716 3755.3.1.498 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PF31016 0.72 59.0 5.60e-01 88.6% 73.1%
3808040 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.72 54.0 4.68e-01 77.2% 72.1%
3812652 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.72 55.0 4.69e-01 79.7% 69.2%
4297121 3755.3.1.46 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › She9_MDM33 0.72 66.0 5.36e-01 98.4% 76.8%
3512620 3755.4.1.1 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PI3K_P85_iSH2 0.72 57.0 5.14e-01 82.1% 71.2%
5010596 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.72 58.0 4.70e-01 84.6% 100.0%
4471073 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.72 65.0 4.62e-01 100.0% 45.1%
4569106 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.71 61.0 4.02e-01 91.1% 33.1%
3190705 2004.1.1.433 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.71 61.0 3.86e-01 91.9% 48.9%
3923558 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.70 52.0 4.49e-01 76.4% 65.9%
3470680 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.70 57.0 3.95e-01 87.8% 80.2%
4016292 192.2.1.18 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING 0.69 59.0 5.76e-01 99.2% 82.2%
3207548 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.69 50.0 4.77e-01 74.0% 100.0%
3712411 3939.1.1.0 ↗ alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.69 55.0 4.27e-01 82.1% 55.6%
3704098 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.69 51.0 4.58e-01 77.2% 74.1%
5047075 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.69 63.0 4.54e-01 99.2% 47.6%
3520603 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.68 51.0 3.20e-01 77.2% 22.6%
4379341 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.68 47.0 4.17e-01 71.5% 91.1%
4410114 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.67 61.0 4.81e-01 100.0% 63.9%
4950734 3755.3.1.637 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.67 62.0 5.26e-01 97.6% 84.7%
4028552 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.67 62.0 4.89e-01 100.0% 70.2%
5042955 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.67 53.0 3.30e-01 81.3% 23.9%
4018888 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.67 61.0 4.25e-01 100.0% 85.9%
3779488 3755.4.1.69 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PF28341 0.67 48.0 4.06e-01 74.0% 62.5%
4310983 2004.1.1.567 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_23 0.67 61.0 3.84e-01 97.6% 28.0%
4259224 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.67 56.0 5.20e-01 90.2% 71.6%
4936792 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.66 59.0 5.19e-01 98.4% 83.2%
3609437 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.66 49.0 4.78e-01 77.2% 99.3%
3732397 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.65 50.0 5.13e-01 82.9% 82.5%
3687766 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.65 57.0 4.55e-01 92.7% 65.3%
4082395 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.64 47.0 4.18e-01 76.4% 100.0%
5002671 3755.3.1.637 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.64 53.0 4.80e-01 86.2% 90.6%
5057329 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.64 53.0 5.08e-01 91.1% 93.1%
3229124 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.64 40.0 3.83e-01 75.6% 53.8%
3770066 3291.1.1.169 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › KIF21A_4th 0.63 49.0 4.17e-01 81.3% 57.9%
3739779 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.63 47.0 4.08e-01 100.0% 51.9%
3965792 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.62 56.0 4.31e-01 98.4% 80.7%
5079565 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.62 48.0 4.24e-01 81.3% 79.4%
4346691 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.61 53.0 4.24e-01 98.4% 47.3%
3913300 3755.3.1.303 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A_4th 0.60 48.0 4.47e-01 84.6% 68.7%
5060432 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.60 50.0 4.99e-01 100.0% 86.9%
3169497 4323.1.1.1 ↗ alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I 0.59 45.0 4.37e-01 78.9% 75.6%
3592972 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.57 52.0 4.47e-01 100.0% 66.7%
3694833 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.57 46.0 4.58e-01 88.6% 81.5%