MK308677.1QAX96993.1X__00049

Bact-Vir

MK308677.1__QAX96993.1__X__00049

Identity

60.7 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_vB_VmeM-Yong_MS32

TaxID: 2500765

View cluster (9 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 440-497

PDB

D2 medium residues 1-73

PDB

Domain cluster: rep: MW879341.1__QXO11119.1__pEaSNUABM54_00293__00293__D1-70_267-286

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3kz5E00	6.10.140.1550	Special › Helix non-globular › Helix Hairpins ›	0.56	27.0	3.23e-01	80.8%	66.7%
4c0dB00	2.30.30.1020	Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain	0.56	40.0	2.89e-01	91.8%	28.3%
1u3eM01	3.90.75.20	Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A ›	0.52	41.0	3.70e-01	87.7%	80.2%
1iicA01	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.51	39.0	3.08e-01	87.7%	79.2%
4my0C01	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.50	39.0	3.24e-01	89.0%	82.5%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3952411	1143.1.1.1 ↗	beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C	0.62	40.0	3.96e-01	100.0%	61.3%
3924247	1143.1.1.1 ↗	beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C	0.56	38.0	3.85e-01	98.6%	69.3%
5016969	1.1.3.0 ↗	beta barrels › cradle loop barrel › RIFT-related › AbrB	0.55	30.0	3.51e-01	79.5%	82.2%
4971372	327.3.1.0 ↗	a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain	0.55	43.0	3.37e-01	87.7%	47.9%
3939023	101.1.1.76 ↗	alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2	0.54	45.0	4.19e-01	90.4%	78.9%
4029394	4964.1.1.2 ↗	alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol	0.51	40.0	3.02e-01	89.0%	64.6%

D3 medium residues 74-273

PDB

Domain cluster: rep: MW735835.1__QTH80358.1__PA10_00158__00158__D71-281

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2vxxA00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.59	32.0	3.50e-01	99.0%	61.0%
3t6gB00	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.57	30.0	3.68e-01	96.0%	76.1%
3a06B03	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.57	21.0	3.03e-01	85.5%	69.3%
5xd7A01	3.30.390.10	Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain	0.55	34.0	4.11e-01	90.0%	95.3%
5b3pA00	3.30.460.80	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit	0.51	22.0	2.58e-01	79.5%	53.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3451017	604.1.1.242 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF28744	0.53	36.0	4.00e-01	94.0%	85.0%
5057498	5054.1.1.6 ↗	alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH	0.50	39.0	4.13e-01	80.0%	94.3%