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MK308677.1__QAX97077.1__X__00133
Bact-VirMK308677.1__QAX97077.1__X__00133
Identity
- Accession:
- MK308677 ↗
- Kingdom:
- phage
Quality
81.6
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-104
Domain cluster:
rep: pre1_saliva_scaffold_4_prodigal-single.1__X__X__00180__D8-94
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vx7H01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.69 | 35.0 | 3.81e-01 | 80.4% | 57.6% |
| 2yvsA02 | 3.30.70.2560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 33.0 | 4.21e-01 | 75.5% | 81.4% |
| 2jvrA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 32.0 | 3.57e-01 | 75.5% | 72.5% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.54 | 33.0 | 3.76e-01 | 89.2% | 82.7% |
| 1zpvA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 30.0 | 3.27e-01 | 85.3% | 64.7% |
| 2cg9X01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 36.0 | 3.69e-01 | 96.1% | 75.0% |
| 1ejfA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 36.0 | 3.59e-01 | 96.1% | 70.0% |
| 2kmwA01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 36.0 | 3.65e-01 | 97.1% | 74.0% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.51 | 34.0 | 2.87e-01 | 93.1% | 39.1% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4028412 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.56 | 39.0 | 3.82e-01 | 96.1% | 67.3% |
| 3905550 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.53 | 38.0 | 3.80e-01 | 99.0% | 70.9% |
| 3855803 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.52 | 37.0 | 3.70e-01 | 98.0% | 70.0% |
| 3445191 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.52 | 33.0 | 3.77e-01 | 93.1% | 88.0% |
| 4948088 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 36.0 | 3.11e-01 | 73.5% | 97.7% |
| 4137463 | 325.1.7.8 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RnfC_N | 0.51 | 38.0 | 4.18e-01 | 88.2% | 98.8% |
| 3409499 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.51 | 34.0 | 3.60e-01 | 88.2% | 81.2% |
| 2794379 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.50 | 40.0 | 4.19e-01 | 100.0% | 94.7% |
| 3595869 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.50 | 36.0 | 3.77e-01 | 96.1% | 83.2% |
D2
medium
residues 113-195
Domain cluster:
rep: OR413585.1__WNT48738.1__SPLA5c_PHROGS00246__00245__D7-87
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qdmA03 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.63 | 37.0 | 3.84e-01 | 71.1% | 62.3% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.57 | 29.0 | 3.27e-01 | 83.1% | 62.1% |
| 1tfeA02 | 1.10.286.20 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.56 | 29.0 | 3.56e-01 | 74.7% | 86.7% |
| 4k08A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 39.0 | 3.37e-01 | 77.1% | 89.6% |
| 7ccmB01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.55 | 43.0 | 3.72e-01 | 89.2% | 62.2% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.55 | 35.0 | 3.47e-01 | 74.7% | 62.4% |
| 6gwuD00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.53 | 43.0 | 3.31e-01 | 90.4% | 55.9% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.53 | 37.0 | 3.58e-01 | 88.0% | 64.9% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 33.0 | 3.54e-01 | 94.0% | 76.1% |
| 2fu2A00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.53 | 35.0 | 3.67e-01 | 91.6% | 73.1% |
| 6pw7A02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.52 | 34.0 | 3.65e-01 | 98.8% | 77.5% |
| 2keyA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.50 | 38.0 | 3.56e-01 | 86.7% | 62.5% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5002758 | 4030.1.1.0 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | 0.60 | 41.0 | 4.54e-01 | 95.2% | 98.3% |
| 4088578 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.56 | 41.0 | 4.45e-01 | 97.6% | 100.0% |
| 4122932 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.55 | 34.0 | 3.40e-01 | 74.7% | 57.8% |
| 3588797 | 4084.1.1.0 ↗ | alpha bundles › ChaB-like › ChaB-like › ChaB-like | 0.55 | 32.0 | 3.53e-01 | 75.9% | 72.3% |
| 3387018 | 131.1.1.15 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III | 0.54 | 41.0 | 3.33e-01 | 84.3% | 69.1% |
| 4038186 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.54 | 41.0 | 3.43e-01 | 83.1% | 99.4% |
| 4984408 | 5065.1.1.3 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 | 0.54 | 39.0 | 2.69e-01 | 75.9% | 52.4% |
| 4107264 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 43.0 | 3.85e-01 | 86.7% | 87.0% |
| 4431938 | 507.1.1.7 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › PF30523 | 0.53 | 42.0 | 3.23e-01 | 100.0% | 35.6% |
| 4977387 | 159.1.1.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG | 0.53 | 37.0 | 3.56e-01 | 77.1% | 61.0% |
| 3620932 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.52 | 37.0 | 3.33e-01 | 75.9% | 82.4% |
| 4889686 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 41.0 | 2.70e-01 | 100.0% | 18.3% |
| 5043641 | 205.1.1.16 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 | 0.51 | 39.0 | 3.16e-01 | 90.4% | 84.1% |
| 3512183 | 131.1.1.15 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III | 0.51 | 39.0 | 3.53e-01 | 84.3% | 85.2% |
| 3215052 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.50 | 30.0 | 3.06e-01 | 79.5% | 60.0% |
D3
medium
residues 208-240