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MK318083.1__AZV01995.1__X__00178
Bact-VirMK318083.1__AZV01995.1__X__00178
Identity
- Accession:
- MK318083 ↗
- Kingdom:
- phage
Quality
84.1
mean pLDDT
Taxonomy
TaxID: 2500821
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-40
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fkbC00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.65 | 50.0 | 3.34e-01 | 87.5% | 47.9% |
| 2dhoA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.62 | 49.0 | 3.15e-01 | 92.5% | 44.7% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.60 | 38.0 | 3.13e-01 | 77.5% | 35.2% |
| 2qkxA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.60 | 45.0 | 2.85e-01 | 87.5% | 37.4% |
| 3qw4B02 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 38.0 | 2.55e-01 | 75.0% | 36.5% |
| 1fi2A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 34.0 | 2.20e-01 | 80.0% | 12.9% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 39.0 | 2.85e-01 | 85.0% | 31.1% |
| 2nnwA01 | 3.30.420.220 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.52 | 37.0 | 2.63e-01 | 75.0% | 45.1% |
| 2ebnA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 39.0 | 2.43e-01 | 80.0% | 38.9% |
| 3afhA02 | 3.90.800.10 | Alpha Beta › Alpha-Beta Complex › Glutamyl-tRNA Synthetase; domain 3 › Glutamyl-tRNA Synthetase; Domain 3 | 0.52 | 40.0 | 3.07e-01 | 90.0% | 75.0% |
| 6uf3A00 | 3.40.630.190 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein | 0.52 | 39.0 | 2.49e-01 | 90.0% | 19.3% |
| 2nrjA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.51 | 37.0 | 2.21e-01 | 70.0% | 30.0% |
| 2pe4A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 40.0 | 2.31e-01 | 87.5% | 22.8% |
| 3k59A02 | 3.30.70.2250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › B family DNA polymerase, N domain, alpha/beta motif | 0.51 | 40.0 | 3.46e-01 | 90.0% | 91.0% |
| 2jz6A01 | 2.30.170.40 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 | 0.50 | 38.0 | 3.66e-01 | 95.0% | 78.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3962443 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.59 | 42.0 | 2.86e-01 | 77.5% | 83.7% |
| 4525941 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.54 | 40.0 | 2.56e-01 | 82.5% | 35.7% |
| 4949435 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.53 | 41.0 | 2.59e-01 | 92.5% | 57.0% |
| 3964245 | 3438.1.1.2 ↗ | alpha arrays › Unknown function protein VPA0580 › Unknown function protein VPA0580 › Unknown function protein VPA0580 › DUF2322 | 0.52 | 42.0 | 3.20e-01 | 95.0% | 97.1% |
| 4034031 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.52 | 38.0 | 3.39e-01 | 85.0% | 89.2% |
| 3924910 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.51 | 42.0 | 2.85e-01 | 95.0% | 83.0% |
| 3280942 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.51 | 40.0 | 2.57e-01 | 92.5% | 64.2% |
| 5040392 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.50 | 40.0 | 2.38e-01 | 100.0% | 41.5% |