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MK327938.1__QBO63881.1__Goslar_00088__00088
Bact-VirMK327938.1__QBO63881.1__Goslar_00088__00088
Identity
- Accession:
- MK327938 ↗
- Kingdom:
- phage
Quality
76.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Goslarvirus›
Escherichia_phage_vB_EcoM_Goslar
TaxID: 2502409
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-153
Domain cluster:
rep: NC_018843.1__YP_006906699.1__SSU5_067__00067__D20-109
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rwxA01 | 2.40.128.340 | Mainly Beta › Beta Barrel › Lipocalin › | 0.68 | 61.0 | 6.01e-01 | 95.6% | 98.3% |
| 4ld1A00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.66 | 32.0 | 2.89e-01 | 97.4% | 34.4% |
| 3v8uA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.65 | 57.0 | 4.91e-01 | 95.6% | 96.1% |
| 3pquA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.65 | 57.0 | 4.89e-01 | 95.6% | 92.1% |
| 7qi3A01 | 3.30.2140.20 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › | 0.62 | 55.0 | 4.00e-01 | 97.4% | 62.1% |
| 1cf9A01 | 2.40.180.10 | Mainly Beta › Beta Barrel › Catalase HpII, Chain A, domain 1 › Catalase core domain | 0.62 | 54.0 | 3.79e-01 | 97.4% | 65.5% |
| 1w4tA02 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.61 | 48.0 | 5.11e-01 | 93.9% | 100.0% |
| 1z87A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 44.0 | 4.72e-01 | 92.1% | 87.0% |
| 6x1kA01 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.60 | 50.0 | 4.99e-01 | 90.4% | 100.0% |
| 1p9rA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.60 | 40.0 | 4.14e-01 | 75.4% | 70.3% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.60 | 41.0 | 3.65e-01 | 71.1% | 80.6% |
| 4qa8A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.59 | 53.0 | 4.34e-01 | 100.0% | 94.8% |
| 2v43A01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.58 | 52.0 | 4.50e-01 | 100.0% | 92.9% |
| 3d9wA02 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.57 | 47.0 | 4.89e-01 | 93.0% | 100.0% |
| 5fl3A01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.56 | 38.0 | 4.07e-01 | 75.4% | 80.0% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.56 | 47.0 | 4.46e-01 | 93.0% | 77.2% |
| 2gx5C00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.56 | 42.0 | 3.85e-01 | 81.6% | 100.0% |
| 2cm4A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 46.0 | 4.29e-01 | 91.2% | 94.5% |
| 3v0rA01 | 2.40.350.20 | Mainly Beta › Beta Barrel › AOC barrel-like › | 0.54 | 43.0 | 4.23e-01 | 85.1% | 89.2% |
| 2cy5A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 47.0 | 4.51e-01 | 93.9% | 87.6% |
| 7wvzA03 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.54 | 41.0 | 3.15e-01 | 80.7% | 69.3% |
| 4wj7D00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 44.0 | 4.35e-01 | 90.4% | 92.7% |
| 4eg9A00 | 2.50.20.40 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.53 | 38.0 | 3.13e-01 | 75.4% | 96.1% |
| 2r55A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 42.0 | 3.53e-01 | 86.8% | 62.0% |
| 3efmA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.53 | 44.0 | 2.96e-01 | 90.4% | 98.9% |
| 4fpwB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 41.0 | 3.73e-01 | 86.0% | 60.2% |
| 2g30A02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.52 | 38.0 | 3.85e-01 | 95.6% | 75.9% |
| 4r7kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 41.0 | 3.71e-01 | 87.7% | 72.6% |
| 4osnA00 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.51 | 44.0 | 4.50e-01 | 93.9% | 99.1% |
| 6g9sA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 40.0 | 2.90e-01 | 84.2% | 92.0% |
| 3k25A00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 39.0 | 3.00e-01 | 83.3% | 83.3% |
| 3d8dA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 43.0 | 4.05e-01 | 93.9% | 86.3% |
| 1pzdA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.50 | 41.0 | 4.09e-01 | 96.5% | 84.3% |
| 4odbA00 | 2.60.90.20 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain | 0.50 | 40.0 | 3.57e-01 | 86.0% | 79.0% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3171382 | 220.1.1.86 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N | 0.68 | 50.0 | 5.52e-01 | 95.6% | 96.7% |
| 4115428 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.66 | 60.0 | 5.14e-01 | 100.0% | 87.2% |
| 3259514 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 43.0 | 4.32e-01 | 93.9% | 70.0% |
| 3638833 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.61 | 53.0 | 4.29e-01 | 95.6% | 53.2% |
| 3386839 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.60 | 53.0 | 4.75e-01 | 97.4% | 84.3% |
| 3406906 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.59 | 47.0 | 4.70e-01 | 95.6% | 82.6% |
| 3584295 | 220.1.1.118 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › RHG20_PH | 0.59 | 44.0 | 4.26e-01 | 97.4% | 69.6% |
| 5032559 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.59 | 44.0 | 4.77e-01 | 89.5% | 100.0% |
| 3227023 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 44.0 | 3.80e-01 | 93.9% | 50.8% |
| 5078475 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.57 | 39.0 | 3.66e-01 | 70.2% | 83.4% |
| 3817243 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.57 | 50.0 | 4.81e-01 | 99.1% | 94.8% |
| 4940663 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.55 | 44.0 | 4.55e-01 | 96.5% | 92.4% |
| 1807154 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.54 | 45.0 | 4.20e-01 | 91.2% | 92.6% |
| 3186506 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.54 | 44.0 | 3.04e-01 | 94.7% | 26.1% |
| 3237828 | 331.9.1.9 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 | 0.54 | 39.0 | 4.05e-01 | 96.5% | 79.1% |
| 3782546 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.53 | 39.0 | 2.76e-01 | 77.2% | 94.0% |
| 4006163 | 5084.5.4.13 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › DUF481, Porin_OmpG | 0.53 | 46.0 | 3.44e-01 | 96.5% | 97.3% |
| 4003932 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.52 | 42.0 | 4.15e-01 | 100.0% | 80.8% |
| 5040875 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.52 | 45.0 | 4.11e-01 | 96.5% | 74.8% |
| 3706995 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.52 | 42.0 | 3.74e-01 | 88.6% | 85.9% |
| 3953847 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.51 | 42.0 | 3.80e-01 | 89.5% | 98.1% |
| 3276899 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.50 | 32.0 | 3.22e-01 | 87.7% | 61.3% |
| 3179238 | 3504.3.1.1 ↗ | beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N | 0.50 | 44.0 | 3.77e-01 | 95.6% | 83.3% |
| 4526689 | 331.3.1.2 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A | 0.50 | 46.0 | 3.52e-01 | 100.0% | 67.8% |