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MK327938.1__QBO63996.1__Goslar_00204__00203
Bact-VirMK327938.1__QBO63996.1__Goslar_00204__00203
Identity
- Accession:
- MK327938 ↗
- Kingdom:
- phage
Quality
65.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Goslarvirus›
Escherichia_phage_vB_EcoM_Goslar
TaxID: 2502409
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 47-99
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5tvfD00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.67 | 42.0 | 2.69e-01 | 100.0% | 12.2% |
| 1i72A00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.65 | 42.0 | 2.69e-01 | 98.1% | 13.5% |
| 1pqzA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.63 | 54.0 | 4.06e-01 | 100.0% | 43.8% |
| 1o5wA02 | 3.90.660.10 | Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › | 0.63 | 50.0 | 3.27e-01 | 92.5% | 75.9% |
| 4ffeX00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.62 | 54.0 | 3.94e-01 | 98.1% | 88.0% |
| 2bcfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.62 | 52.0 | 3.41e-01 | 98.1% | 98.1% |
| 3l9rA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.60 | 49.0 | 3.48e-01 | 94.3% | 100.0% |
| 2od0A00 | 3.30.1460.30 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone | 0.60 | 44.0 | 3.63e-01 | 81.1% | 74.8% |
| 3jvgA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.59 | 49.0 | 3.48e-01 | 94.3% | 87.3% |
| 1k8iA01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.59 | 52.0 | 4.64e-01 | 100.0% | 72.7% |
| 1zt4C01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.59 | 52.0 | 3.59e-01 | 100.0% | 35.8% |
| 1q8rA00 | 3.30.1330.70 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Holliday junction resolvase RusA | 0.59 | 46.0 | 3.65e-01 | 90.6% | 72.0% |
| 6a97C01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.57 | 49.0 | 3.75e-01 | 100.0% | 51.1% |
| 2o5nA02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.57 | 46.0 | 3.44e-01 | 96.2% | 80.9% |
| 2o3iA01 | 3.40.1610.10 | Alpha Beta › 3-Layer(aba) Sandwich › CV3147-like fold › CV3147-like domain | 0.56 | 40.0 | 2.63e-01 | 75.5% | 53.0% |
| 4g59C02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.56 | 45.0 | 3.39e-01 | 100.0% | 83.5% |
| 1xjvA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 45.0 | 3.45e-01 | 98.1% | 83.1% |
| 1u04A04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 45.0 | 3.02e-01 | 98.1% | 81.7% |
| 4gnxB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 45.0 | 3.54e-01 | 98.1% | 95.1% |
| 3zssA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 45.0 | 2.72e-01 | 94.3% | 18.0% |
| 2k18A02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 38.0 | 2.93e-01 | 92.5% | 32.5% |
| 3gtzA00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.53 | 43.0 | 3.43e-01 | 92.5% | 98.3% |
| 1agxA01 | 3.40.50.1170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › L-asparaginase, N-terminal domain | 0.53 | 41.0 | 2.73e-01 | 84.9% | 65.3% |
| 1f32A02 | 3.30.1120.50 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Pepsin inhibitor-3 | 0.52 | 38.0 | 3.73e-01 | 98.1% | 68.3% |
| 1te5A00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.52 | 45.0 | 2.91e-01 | 100.0% | 22.1% |
| 4fgoA00 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.52 | 42.0 | 2.96e-01 | 92.5% | 51.9% |
| 4ofzA02 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.51 | 44.0 | 3.00e-01 | 98.1% | 91.2% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5022958 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.66 | 47.0 | 4.38e-01 | 79.2% | 60.0% |
| 4979591 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.66 | 46.0 | 4.20e-01 | 73.6% | 61.4% |
| 3842370 | 233.1.1.0 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain | 0.65 | 56.0 | 3.88e-01 | 96.2% | 89.1% |
| 3959171 | 4029.1.1.0 ↗ | a+b duplicates or obligate multimers › SSH domain in siroheme synthase middle domains-like › SSH domain in siroheme synthase middle domains-like › SSH domain in siroheme synthase middle domains-like | 0.65 | 38.0 | 4.40e-01 | 96.2% | 80.0% |
| 4378012 | 241.7.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YgaC/TfoX-N like › YgaC/TfoX-N like › TfoX_N | 0.64 | 48.0 | 3.86e-01 | 81.1% | 75.2% |
| 150881 | 233.1.1.0 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain | 0.62 | 54.0 | 3.94e-01 | 98.1% | 88.0% |
| 6599 | 233.1.1.0 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain | 0.62 | 53.0 | 4.11e-01 | 100.0% | 48.4% |
| 5043517 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.60 | 50.0 | 3.51e-01 | 98.1% | 82.1% |
| 4338928 | 233.1.1.6 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I_3 | 0.58 | 51.0 | 4.31e-01 | 100.0% | 71.1% |
| 3210826 | 2485.1.1.67 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GILT | 0.57 | 45.0 | 2.97e-01 | 86.8% | 90.5% |
| 3863169 | 233.1.1.1 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I | 0.57 | 45.0 | 3.37e-01 | 100.0% | 37.7% |
| 3591799 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.56 | 40.0 | 3.82e-01 | 90.6% | 63.1% |
| 5041843 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.55 | 46.0 | 3.19e-01 | 98.1% | 85.5% |
| 4165617 | 865.1.1.0 ↗ | beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain | 0.53 | 47.0 | 3.59e-01 | 100.0% | 61.6% |
| 3387637 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.53 | 44.0 | 2.67e-01 | 94.3% | 14.2% |
| 4972340 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.53 | 38.0 | 3.66e-01 | 81.1% | 70.8% |
| 3172925 | 7546.1.1.1 ↗ | a/b three-layered sandwiches › Glutaminase/Asparaginase N-terminal domain › Glutaminase/Asparaginase N-terminal domain › Glutaminase/Asparaginase N-terminal domain › Asparaginase | 0.52 | 41.0 | 2.76e-01 | 84.9% | 67.8% |
| 1697858 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.52 | 46.0 | 3.34e-01 | 100.0% | 61.0% |
| 4498611 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.52 | 41.0 | 2.98e-01 | 98.1% | 71.1% |
| 3361836 | 2003.1.2.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GDI | 0.52 | 41.0 | 2.99e-01 | 94.3% | 95.4% |
| 4948788 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.51 | 40.0 | 2.45e-01 | 94.3% | 17.8% |
| 3924696 | 2485.1.1.55 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FAF1 | 0.51 | 40.0 | 3.02e-01 | 88.7% | 79.3% |