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MK359302.1__QAY04064.1__SEA_SOMBRERO_106__00105

Bact-Vir

MK359302.1__QAY04064.1__SEA_SOMBRERO_106__00105

Identity

Accession:
MK359302 ↗
Kingdom:
phage

Quality

70.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Montyvirus› Gordonia_phage_Sombrero

TaxID: 2502420

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-69
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1g6gB00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.62 51.0 3.99e-01 100.0% 96.0%
1i9gA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.60 50.0 4.64e-01 96.0% 87.5%
2q6iA02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.58 47.0 3.86e-01 96.0% 63.1%
5utkA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 43.0 3.64e-01 100.0% 45.6%
2f4nB02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.55 42.0 3.68e-01 96.0% 68.1%
5v7qZ00 3.30.1390.20 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30/L7 0.51 40.0 3.93e-01 100.0% 96.6%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4138417 284.1.1.4 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB 0.66 54.0 4.81e-01 100.0% 83.7%
3989956 284.1.1.4 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB 0.64 52.0 4.57e-01 100.0% 78.8%
4066106 284.1.1.4 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB 0.63 52.0 4.62e-01 100.0% 82.5%
4317197 284.1.1.4 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB 0.63 52.0 4.51e-01 100.0% 79.8%
4443488 284.1.1.4 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB 0.61 50.0 4.55e-01 100.0% 88.0%
1176226 1.1.4.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C 0.55 42.0 3.70e-01 96.0% 69.6%
3600531 4012.3.1.0 ↗ a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 0.53 45.0 4.47e-01 100.0% 94.3%
3494259 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.53 41.0 2.55e-01 98.0% 93.8%
None — 0.51 42.0 2.57e-01 100.0% 27.0%
3337755 11.1.1.314 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TPPII_Ig-like-1 0.50 43.0 3.18e-01 98.0% 39.2%