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MK373794.1__QBQ80941.1__HdK1rev_00037__00037
Bact-VirMK373794.1__QBQ80941.1__HdK1rev_00037__00037
Identity
- Accession:
- MK373794 ↗
- Kingdom:
- phage
Quality
76.0
mean pLDDT
Taxonomy
TaxID: 2508190
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 76-240
Domain cluster:
rep: ON529866.1__UTC30100.1__MAINES_00610__00061__D285-468
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20155.5 best | TMP_3 | 173.6 | 5.70e-51 | 100.0% | 85.4% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.62 | 32.0 | 4.32e-01 | 77.0% | 96.5% |
| 7yu4A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.56 | 39.0 | 3.40e-01 | 70.3% | 77.0% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.56 | 40.0 | 4.29e-01 | 78.2% | 84.6% |
| 1vfpB02 | 1.20.1110.10 | Mainly Alpha › Up-down Bundle › Calcium-transporting ATPase, transmembrane domain › Calcium-transporting ATPase, transmembrane domain | 0.55 | 44.0 | 3.35e-01 | 86.1% | 77.1% |
| 3h4cA02 | 1.10.472.110 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.53 | 33.0 | 3.93e-01 | 75.8% | 91.8% |
| 4mcwA02 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.52 | 37.0 | 3.54e-01 | 73.3% | 95.3% |
| 1f0jA00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.51 | 41.0 | 3.26e-01 | 85.5% | 64.4% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.50 | 38.0 | 4.06e-01 | 81.8% | 91.4% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963765 | 159.1.2.5 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › TMP_3 | 0.96 | 93.0 | 8.80e-01 | 99.4% | 86.3% |
| 3164789 | 159.1.2.5 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › TMP_3 | 0.75 | 68.0 | 6.82e-01 | 100.0% | 97.0% |
| 3981280 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.63 | 51.0 | 5.46e-01 | 99.4% | 97.2% |
| 3576783 | 3352.1.1.19 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › Mannosyl_trans2 | 0.56 | 47.0 | 3.68e-01 | 90.3% | 98.9% |
| 5028104 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.53 | 44.0 | 3.44e-01 | 90.3% | 97.3% |