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MK387337.2__QAU04457.1__Va1_043__00014

Bact-Vir

MK387337.2__QAU04457.1__Va1_043__00014

Identity

Accession:
MK387337 ↗
Kingdom:
phage

Quality

89.7 mean pLDDT

Taxonomy

TaxID: 2508852

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-85
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ng6A01 1.10.1510.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Uncharacterised protein YqeY/AIM41, N-terminal domain 0.81 73.0 7.05e-01 96.4% 96.7%
3pyoY00 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 49.0 5.62e-01 100.0% 90.3%
8alzB08 1.10.3380.10 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain 0.68 51.0 4.40e-01 80.7% 86.3%
4m0mA04 1.20.1270.440 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.67 60.0 5.37e-01 100.0% 93.2%
4fp4A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.67 60.0 4.31e-01 100.0% 45.3%
2fonA04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.67 48.0 4.13e-01 74.7% 87.6%
1dd5A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.66 50.0 4.60e-01 80.7% 84.4%
4pxoA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.66 50.0 4.30e-01 80.7% 63.4%
2clbA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.66 60.0 4.78e-01 100.0% 73.6%
2yw6B00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.65 59.0 4.83e-01 100.0% 76.7%
1vqrD00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.65 49.0 3.48e-01 81.9% 40.6%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.65 50.0 4.40e-01 80.7% 83.8%
4kk2B00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.65 57.0 3.82e-01 100.0% 37.2%
2q58B00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.64 49.0 3.30e-01 81.9% 31.9%
2rldA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.64 58.0 5.18e-01 98.8% 90.4%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.64 49.0 4.45e-01 80.7% 84.4%
7oq4Z01 1.20.120.950 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 0.63 54.0 5.15e-01 98.8% 78.6%
4hzuS00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.61 54.0 4.36e-01 100.0% 65.9%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.61 42.0 4.51e-01 73.5% 81.1%
3eabE00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.61 45.0 4.49e-01 77.1% 84.9%
4mcwA02 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.61 51.0 3.98e-01 96.4% 52.8%
2gb7D00 3.40.91.80 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.59 44.0 3.11e-01 81.9% 61.3%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 45.0 4.18e-01 81.9% 91.6%
4iu9B01 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.59 53.0 3.87e-01 100.0% 87.1%
1xg2B00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.59 53.0 4.34e-01 100.0% 94.0%
1sumB02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.59 45.0 4.02e-01 81.9% 71.2%
3llkA02 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.58 52.0 4.37e-01 100.0% 69.9%
2yogA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 49.0 3.81e-01 96.4% 53.8%
1sziA02 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.58 40.0 3.46e-01 72.3% 54.7%
3a98A02 1.20.1270.350 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain 0.58 46.0 4.52e-01 100.0% 79.3%
3bt5A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.58 50.0 4.21e-01 100.0% 80.1%
4ivfA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.58 44.0 3.96e-01 81.9% 69.8%
2z1qB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.57 50.0 4.27e-01 98.8% 81.6%
2odmA00 1.10.287.750 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like 0.57 42.0 4.35e-01 78.3% 83.5%
2ygwA01 1.20.140.90 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain 0.57 50.0 4.04e-01 95.2% 87.6%
2r40D00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.56 44.0 3.28e-01 86.7% 85.8%
6mh4A03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.56 37.0 3.82e-01 85.5% 70.9%
1txuA01 1.10.246.120 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.56 47.0 4.56e-01 97.6% 87.2%
2i0mA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.55 41.0 3.86e-01 80.7% 78.3%
2fbnA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 39.0 3.23e-01 80.7% 40.5%
4gycA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.55 47.0 3.54e-01 100.0% 45.5%
4ehsA00 1.10.860.10 Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A 0.54 48.0 4.24e-01 100.0% 79.0%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 32.0 3.15e-01 86.7% 54.3%
1i5nB00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.52 45.0 3.88e-01 91.6% 61.3%
2pqrA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 42.0 4.04e-01 100.0% 76.3%
4jd9G00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.51 44.0 3.98e-01 98.8% 68.3%
4y0bA00 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.51 44.0 3.78e-01 100.0% 91.4%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3615002 109.4.1.72 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C 0.75 55.0 3.85e-01 80.7% 26.2%
5007869 601.33.1.0 alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain 0.73 51.0 4.84e-01 73.5% 69.0%
3963743 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.72 50.0 4.66e-01 72.3% 79.0%
4028568 633.10.1.0 alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like 0.66 60.0 4.87e-01 100.0% 63.9%
4030302 7015.1.1.0 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.66 60.0 5.02e-01 98.8% 91.1%
3615307 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.65 51.0 4.86e-01 81.9% 72.6%
3857880 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.64 48.0 3.95e-01 78.3% 64.8%
3595289 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.64 49.0 4.64e-01 81.9% 69.5%
3927159 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.64 58.0 4.78e-01 97.6% 72.1%
5077399 1075.5.1.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter 0.63 51.0 4.18e-01 89.2% 69.8%
3734644 5001.1.1.85 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Fung_rhodopsin 0.63 53.0 3.68e-01 94.0% 71.5%
4277373 4994.1.1.1 alpha duplicates or obligate multimers › EF2458-like › EF2458-like › EF2458-like › DUF1507 0.63 46.0 4.47e-01 77.1% 72.0%
4417245 5069.1.1.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.61 49.0 3.91e-01 90.4% 97.8%
3730788 3924.1.1.0 alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 0.60 54.0 4.14e-01 100.0% 57.9%
3606547 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.59 44.0 3.75e-01 79.5% 87.1%
4022736 109.4.1.109 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 0.59 53.0 3.77e-01 96.4% 44.0%
3841658 604.10.1.12 alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PF27853 0.59 42.0 3.87e-01 75.9% 74.5%
3218544 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.59 47.0 4.80e-01 100.0% 93.8%
4247950 4994.1.1.1 alpha duplicates or obligate multimers › EF2458-like › EF2458-like › EF2458-like › DUF1507 0.58 44.0 4.22e-01 78.3% 72.6%
4036522 604.9.1.1 alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.58 42.0 4.15e-01 77.1% 67.8%
3701078 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.58 52.0 4.39e-01 98.8% 71.9%
3623842 601.24.1.0 alpha bundles › Four-helical up-and-down bundle › FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) › FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 0.57 43.0 3.79e-01 80.7% 75.2%
3212006 601.24.1.0 alpha bundles › Four-helical up-and-down bundle › FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) › FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 0.57 42.0 3.71e-01 80.7% 73.1%
3709276 109.4.1.3262 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dor1, VPS51_Exo84_N 0.55 49.0 2.92e-01 98.8% 35.6%
4108644 603.1.1.215 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27853 0.55 40.0 3.70e-01 77.1% 76.4%
3190074 109.4.1.929 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_ECM29 0.55 42.0 2.92e-01 83.1% 42.8%
3856780 109.4.1.30 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT 0.52 43.0 3.39e-01 90.4% 49.4%
3060781 4163.1.1.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.50 41.0 3.45e-01 95.2% 52.4%
3724504 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 46.0 3.40e-01 98.8% 48.0%
D2 high residues 92-139
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4eqqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 66.0 6.66e-01 100.0% 93.8%
1k78I00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 73.0 6.86e-01 100.0% 84.5%
1j78A05 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.79 54.0 5.00e-01 70.8% 58.3%
3h20A04 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.76 66.0 5.37e-01 97.9% 57.3%
4usaA02 1.10.150.120 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain 0.76 64.0 4.86e-01 100.0% 39.5%
2di0A01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.76 49.0 5.03e-01 70.8% 69.6%
1u78A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 58.0 5.96e-01 100.0% 88.9%
4jqfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 66.0 5.80e-01 100.0% 94.5%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 6.21e-01 100.0% 87.5%
2co9A00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.75 51.0 3.96e-01 70.8% 42.2%
7s03A01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.75 57.0 5.67e-01 95.8% 82.0%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 65.0 5.06e-01 100.0% 64.2%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 5.83e-01 100.0% 84.0%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 5.59e-01 100.0% 77.8%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 53.0 5.31e-01 93.8% 78.0%
1qrvA00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.71 50.0 4.32e-01 72.9% 53.4%
4iejA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 58.0 5.07e-01 100.0% 60.0%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 61.0 5.26e-01 100.0% 84.6%
2bnlC00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.70 58.0 4.31e-01 97.9% 88.1%
1qo0D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 48.0 4.96e-01 75.0% 82.6%
2lbfB01 1.10.10.1410 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.69 58.0 5.22e-01 97.9% 68.1%
1g4wR02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.69 54.0 3.62e-01 100.0% 20.8%
2qgyB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.67 57.0 4.20e-01 100.0% 36.5%
1wgfA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.67 46.0 4.48e-01 72.9% 79.2%
1r3dA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.66 53.0 3.32e-01 100.0% 17.1%
7p2yd01 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.66 53.0 4.40e-01 100.0% 98.0%
2vliB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 54.0 3.70e-01 100.0% 26.0%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 49.0 4.99e-01 100.0% 89.4%
5n13A00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.64 52.0 4.14e-01 95.8% 77.8%
2lrdA00 1.10.10.1840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.64 47.0 4.49e-01 93.8% 67.2%
2uvaG01 1.20.1050.120 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.63 49.0 3.76e-01 95.8% 50.0%
2ld7B00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.63 50.0 4.49e-01 95.8% 81.3%
7lhsB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 52.0 3.50e-01 95.8% 81.9%
1e3oC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 48.0 4.84e-01 100.0% 87.5%
3solA00 1.20.58.1630 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS 0.62 51.0 4.29e-01 100.0% 60.4%
2np5D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.58 47.0 3.43e-01 100.0% 47.5%
4jb3A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 47.0 4.24e-01 95.8% 88.9%
4dccA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 48.0 4.24e-01 97.9% 85.1%
5n17A01 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.57 47.0 3.82e-01 100.0% 87.5%
5ko4A00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.57 46.0 3.76e-01 95.8% 88.1%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 45.0 3.90e-01 93.8% 86.4%
2q0iA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.56 44.0 2.78e-01 95.8% 27.7%
7odyC01 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.55 42.0 3.62e-01 95.8% 67.4%
5c8gB00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.55 43.0 3.48e-01 100.0% 69.2%
2ckzA01 6.10.140.870 Special › Helix non-globular › Helix Hairpins › 0.55 39.0 3.97e-01 77.1% 93.8%
1vb3A01 3.90.1380.10 Alpha Beta › Alpha-Beta Complex › threonine synthase, domain 1, chain A › Threonine synthase, N-terminal domain 0.54 44.0 3.81e-01 95.8% 80.2%
2b0cA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.53 43.0 3.97e-01 95.8% 97.0%
3kbbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.53 43.0 3.89e-01 93.8% 70.0%
3k6hA01 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.51 41.0 2.93e-01 97.9% 48.5%
2wyoA03 1.10.1080.10 Mainly Alpha › Orthogonal Bundle › Glutathione Synthetase; Chain A, domain 3 › Glutathione Synthetase; Chain A, domain 3 0.51 35.0 3.17e-01 75.0% 77.3%
2gfhA02 1.20.120.710 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain 0.50 38.0 3.37e-01 95.8% 60.5%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5028090 610.3.1.0 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain 0.92 84.0 5.78e-01 100.0% 33.1%
4975642 610.3.1.0 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain 0.91 83.0 5.50e-01 100.0% 31.4%
5036428 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.90 81.0 5.35e-01 100.0% 30.6%
4280938 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.90 81.0 5.36e-01 100.0% 31.4%
5047616 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.89 79.0 5.32e-01 100.0% 32.4%
5068704 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.88 79.0 5.35e-01 100.0% 31.5%
5040600 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.88 78.0 5.30e-01 100.0% 33.3%
4942515 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.87 77.0 5.22e-01 100.0% 32.4%
5064744 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.86 76.0 5.16e-01 100.0% 32.4%
4089375 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.86 77.0 5.13e-01 100.0% 31.4%
5055491 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.86 71.0 4.88e-01 91.7% 27.5%
3513576 101.1.1.76 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.84 67.0 6.47e-01 97.9% 78.2%
4596379 7000.1.1.0 alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.83 73.0 6.47e-01 100.0% 72.9%
3955434 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 71.0 7.04e-01 100.0% 90.0%
3924079 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.82 71.0 5.90e-01 100.0% 62.4%
5083383 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 70.0 6.45e-01 100.0% 75.0%
3726085 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.81 70.0 5.86e-01 100.0% 58.8%
4113660 101.1.2.536 alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc3_2 0.80 64.0 6.37e-01 93.8% 84.0%
4126690 101.35.1.4 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.80 71.0 6.79e-01 100.0% 89.1%
4501343 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.80 66.0 6.36e-01 100.0% 83.6%
3258173 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 69.0 6.57e-01 95.8% 89.1%
5046292 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 67.0 5.63e-01 100.0% 56.2%
3604252 7000.1.1.0 alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.79 68.0 6.60e-01 100.0% 87.3%
3933926 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 70.0 6.33e-01 100.0% 76.9%
4001277 101.35.1.7 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Oxidored-like 0.78 66.0 6.12e-01 100.0% 76.6%
3893171 101.1.1.12 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 0.77 70.0 6.45e-01 100.0% 81.7%
4128053 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.77 68.0 6.51e-01 100.0% 89.1%
3906103 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.76 66.0 6.06e-01 100.0% 80.0%
3884711 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 69.0 6.20e-01 100.0% 76.9%
3879117 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 68.0 6.53e-01 100.0% 90.9%
3632862 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 68.0 5.14e-01 100.0% 87.3%
3286911 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 64.0 5.75e-01 100.0% 82.9%
1068638 101.35.1.4 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.75 65.0 6.21e-01 100.0% 87.5%
4031678 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.75 69.0 6.15e-01 100.0% 75.4%
3593172 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 66.0 5.45e-01 100.0% 71.8%
3909922 101.1.1.12 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 0.75 66.0 6.59e-01 100.0% 98.0%
4014101 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 66.0 5.46e-01 100.0% 60.0%
3738343 101.1.1.79 alpha arrays › HTH › HTH › Three-helical HTH › HTH_ABP1_N 0.74 65.0 6.02e-01 100.0% 78.3%
5026209 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 65.0 6.08e-01 100.0% 83.3%
3198858 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 65.0 5.75e-01 100.0% 70.0%
5046694 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 57.0 5.50e-01 93.8% 76.4%
3489856 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 62.0 5.35e-01 100.0% 80.0%
3542152 397.7.1.7 few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 › BSMAP 0.73 61.0 5.10e-01 100.0% 62.2%
3203378 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 65.0 5.86e-01 100.0% 76.9%
3193553 101.1.2.212 alpha arrays › HTH › HTH › winged helix domain › Cac1_C 0.73 60.0 5.57e-01 100.0% 76.9%
3465761 708.1.1.7 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › DBD_Tnp_Mut 0.73 60.0 4.45e-01 100.0% 34.6%
3980764 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 57.0 5.90e-01 97.9% 93.3%
3422646 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 60.0 5.67e-01 100.0% 76.7%
4949223 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 61.0 5.80e-01 100.0% 100.0%
4569442 101.35.1.4 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.72 60.0 5.82e-01 100.0% 92.7%
3908865 101.1.2.536 alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc3_2 0.72 63.0 6.09e-01 100.0% 89.1%
4979322 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.72 63.0 5.60e-01 100.0% 68.6%
5070167 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 63.0 6.04e-01 100.0% 90.9%
3330562 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 60.0 5.29e-01 100.0% 62.7%
3454767 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 62.0 6.00e-01 100.0% 87.3%
3877844 529.1.1.2 few secondary structure elements › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › BSMAP 0.71 59.0 4.94e-01 100.0% 60.0%
3334149 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 60.0 5.79e-01 100.0% 87.3%
3948842 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 60.0 5.84e-01 100.0% 89.1%
4952808 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 59.0 5.76e-01 100.0% 89.1%
4190132 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 55.0 5.53e-01 100.0% 90.0%
3366917 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.70 58.0 5.64e-01 100.0% 85.5%
3795880 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.69 57.0 5.53e-01 95.8% 94.5%
3467989 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 60.0 5.61e-01 100.0% 81.7%
5079851 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 56.0 5.25e-01 100.0% 73.3%
3311830 708.1.1.7 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › DBD_Tnp_Mut 0.69 56.0 4.17e-01 100.0% 34.1%
3723123 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 56.0 5.27e-01 100.0% 75.0%
3417440 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.69 56.0 4.17e-01 100.0% 34.1%
4978899 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 56.0 4.91e-01 100.0% 87.5%
5021354 101.1.2.619 alpha arrays › HTH › HTH › winged helix domain › HTH_33 0.68 57.0 5.24e-01 100.0% 75.4%
4966213 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 57.0 5.24e-01 100.0% 76.9%
5008720 101.1.1.548 alpha arrays › HTH › HTH › Three-helical HTH › HTH_32 0.67 56.0 5.20e-01 100.0% 75.4%
3973616 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 56.0 5.32e-01 100.0% 78.3%
5007660 101.1.1.187 alpha arrays › HTH › HTH › Three-helical HTH › HTH_33 0.67 56.0 5.22e-01 100.0% 75.4%
5003693 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 56.0 5.17e-01 100.0% 75.4%
3428283 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 54.0 5.16e-01 100.0% 76.7%
3267034 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 54.0 5.38e-01 100.0% 94.0%
3453546 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 54.0 5.02e-01 100.0% 72.3%
3464617 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 54.0 5.12e-01 100.0% 78.3%
3814136 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 55.0 5.34e-01 100.0% 89.1%
3618386 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.61 49.0 5.00e-01 95.8% 97.8%
5056734 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 50.0 3.93e-01 100.0% 55.7%
3617137 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.60 48.0 4.66e-01 100.0% 83.6%
3190754 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.59 48.0 4.40e-01 100.0% 71.4%
4270025 3949.1.1.1 alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › IPPT 0.57 44.0 3.97e-01 87.5% 62.9%
4458432 3949.1.1.1 alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › IPPT 0.53 43.0 3.85e-01 97.9% 64.0%
4455041 3949.1.1.1 alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › IPPT 0.52 40.0 3.77e-01 91.7% 69.2%
3471868 6171.1.1.1 alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › JHD 0.52 43.0 3.27e-01 93.8% 62.6%