←Back to structures

MK387337.2__QAU04510.1__Va1_171__00067

Bact-Vir

MK387337.2__QAU04510.1__Va1_171__00067

Identity

Accession:
MK387337 ↗
Kingdom:
phage

Quality

61.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_Va1

TaxID: 2508852

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 259-391
PDB
D2 high residues 417-579
PDB
D3 high residues 693-745
PDB
Domain cluster: rep: NC_048777.1__YP_009847662.1__HWC33_gp34__00034__D278-320
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3f8xB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 38.0 3.02e-01 86.8% 95.5%
1mkfA02 2.60.40.1340 Mainly Beta › Sandwich › Immunoglobulin-like › Chemokine-binding protein M3-like 0.51 34.0 2.47e-01 71.7% 29.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3621418 389.1.1.7 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA 0.75 41.0 4.25e-01 83.0% 56.0%
3586809 389.1.1.0 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.74 41.0 4.23e-01 83.0% 56.0%
3817137 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.54 40.0 3.46e-01 88.7% 94.0%
3499939 387.1.1.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related 0.53 45.0 3.17e-01 98.1% 40.2%
D4 medium residues 642-692
PDB