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MK392368.1__QAY16105.1__SEA_ELESAR_54__00053
Bact-VirMK392368.1__QAY16105.1__SEA_ELESAR_54__00053
Identity
- Accession:
- MK392368 ↗
- Kingdom:
- phage
Quality
57.0
mean pLDDT
Taxonomy
TaxID: 2510522
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-51
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gkfA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.72 | 64.0 | 4.50e-01 | 100.0% | 69.9% |
| 2odaA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.70 | 61.0 | 4.00e-01 | 97.9% | 34.9% |
| 4xukA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.69 | 50.0 | 3.00e-01 | 83.0% | 12.4% |
| 4toiA02 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.66 | 48.0 | 4.84e-01 | 83.0% | 77.1% |
| 1v8bA01 | 3.40.50.1480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Adenosylhomocysteinase-like | 0.66 | 57.0 | 3.44e-01 | 97.9% | 41.9% |
| 8be0A01 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.65 | 57.0 | 3.79e-01 | 100.0% | 35.1% |
| 1f5oA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.65 | 55.0 | 3.89e-01 | 97.9% | 71.8% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 55.0 | 5.22e-01 | 95.7% | 82.5% |
| 4py6C00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.64 | 50.0 | 3.64e-01 | 85.1% | 31.5% |
| 2gf4A00 | 1.20.1270.110 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Uncharacterised protein family UPF0058 | 0.62 | 53.0 | 4.33e-01 | 97.9% | 64.8% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.62 | 54.0 | 4.58e-01 | 100.0% | 77.2% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.56 | 48.0 | 3.87e-01 | 93.6% | 80.5% |
| 3m9lA02 | 1.10.260.80 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › | 0.55 | 47.0 | 4.59e-01 | 95.7% | 96.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5007853 | 101.1.2.192 ↗ | alpha arrays › HTH › HTH › winged helix domain › B_lactamase-like_C | 0.77 | 69.0 | 5.97e-01 | 97.9% | 69.6% |
| 3593048 | 564.1.1.0 ↗ | alpha arrays › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors | 0.75 | 55.0 | 5.30e-01 | 80.9% | 81.8% |
| 3397049 | 3919.1.1.0 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 | 0.73 | 53.0 | 4.04e-01 | 78.7% | 83.5% |
| 3935681 | 3664.1.1.0 ↗ | alpha arrays › Small, acid-soluble spore protein C › Small, acid-soluble spore protein C › Small, acid-soluble spore protein C | 0.72 | 60.0 | 5.90e-01 | 93.6% | 90.0% |
| 4953240 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.69 | 62.0 | 4.39e-01 | 100.0% | 35.6% |
| 4033402 | 102.2.1.4 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH | 0.66 | 56.0 | 4.52e-01 | 100.0% | 62.1% |
| 3560230 | 102.1.3.8 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain › Mab-21_C | 0.65 | 55.0 | 4.16e-01 | 100.0% | 42.4% |
| 5042650 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.65 | 57.0 | 3.53e-01 | 100.0% | 17.8% |
| 4577571 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.62 | 52.0 | 3.56e-01 | 97.9% | 26.9% |
| 4017003 | 223.1.1.21 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HODM_asu-like | 0.57 | 49.0 | 2.95e-01 | 97.9% | 86.9% |
| 3708809 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 41.0 | 3.82e-01 | 85.1% | 61.5% |
D2
high
residues 55-141