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MK411746.1__QAY16127.1__SEA_SONALI_15__00015
Bact-VirMK411746.1__QAY16127.1__SEA_SONALI_15__00015
Identity
- Accession:
- MK411746 ↗
- Kingdom:
- phage
Quality
91.1
mean pLDDT
Taxonomy
TaxID: 2510495
Cluster
View cluster (80 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-140
Domain cluster:
rep: JN051154.1__AER59760.1__clP1_001__00001__D30-123
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4aieA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 26.0 | 2.96e-01 | 89.3% | 51.4% |
| 5dn8A03 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.57 | 35.0 | 3.99e-01 | 90.3% | 86.3% |
| 1hp7A01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.56 | 30.0 | 3.13e-01 | 96.1% | 52.6% |
| 1ti2B01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 41.0 | 3.81e-01 | 87.4% | 60.9% |
| 6kguA01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.55 | 37.0 | 4.02e-01 | 100.0% | 83.7% |
| 1hh2P03 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.55 | 36.0 | 3.98e-01 | 89.3% | 86.1% |
| 2rblA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.55 | 19.0 | 2.92e-01 | 71.8% | 100.0% |
| 1nz8A00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.53 | 38.0 | 3.68e-01 | 87.4% | 65.5% |
| 3ue3A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.53 | 40.0 | 4.09e-01 | 99.0% | 84.5% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3428671 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.65 | 35.0 | 4.10e-01 | 95.1% | 75.7% |
| 3509116 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.63 | 34.0 | 4.27e-01 | 95.1% | 90.0% |
| 3994311 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.61 | 24.0 | 3.52e-01 | 83.5% | 85.0% |
| 4405341 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.57 | 39.0 | 2.68e-01 | 93.2% | 18.3% |
| 2499653 | 1.1.7.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_9 | 0.55 | 24.0 | 3.21e-01 | 82.5% | 79.6% |
| 5024720 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.53 | 29.0 | 3.35e-01 | 87.4% | 78.5% |
| 3250734 | 5050.1.1.32 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn | 0.53 | 43.0 | 2.78e-01 | 90.3% | 74.9% |
| 3177995 | 5050.1.1.32 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn | 0.52 | 39.0 | 2.58e-01 | 82.5% | 47.7% |
| 3814809 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.52 | 39.0 | 3.91e-01 | 97.1% | 77.3% |
| 3797875 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.50 | 38.0 | 2.64e-01 | 80.6% | 58.9% |
| 3785811 | 109.4.1.1125 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TAF2_C | 0.50 | 39.0 | 2.67e-01 | 85.4% | 54.7% |
| 3617645 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.50 | 35.0 | 2.01e-01 | 91.3% | 7.1% |