←Back to structures
MK411746.1__QAY16130.1__SEA_SONALI_18__00018
Bact-VirMK411746.1__QAY16130.1__SEA_SONALI_18__00018
Identity
- Accession:
- MK411746 ↗
- Kingdom:
- phage
Quality
89.3
mean pLDDT
Taxonomy
TaxID: 2510495
Cluster
View cluster (81 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-104
Domain cluster:
rep: OQ326496.2__WDQ45522.1__X__00066__D7-128
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.75 | 60.0 | 4.92e-01 | 96.0% | 48.6% |
| 3cddA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.71 | 61.0 | 4.91e-01 | 96.0% | 50.0% |
| 2as9A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.70 | 50.0 | 5.17e-01 | 98.0% | 78.7% |
| 2rdeA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.67 | 51.0 | 5.01e-01 | 100.0% | 73.9% |
| 2k4qA00 | 4.10.410.40 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › | 0.65 | 58.0 | 5.07e-01 | 100.0% | 85.3% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.63 | 50.0 | 4.70e-01 | 98.0% | 70.5% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 52.0 | 5.20e-01 | 99.0% | 90.5% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 53.0 | 4.77e-01 | 98.0% | 85.9% |
| 1omsA00 | 3.30.70.1050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain | 0.59 | 43.0 | 4.21e-01 | 77.2% | 96.5% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 37.0 | 3.90e-01 | 81.2% | 73.3% |
| 6c98A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 36.0 | 3.77e-01 | 80.2% | 70.3% |
| 3d2uA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 37.0 | 3.93e-01 | 81.2% | 73.9% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 29.0 | 3.44e-01 | 88.1% | 75.8% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 29.0 | 3.41e-01 | 99.0% | 77.8% |
| 1xuvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 40.0 | 3.45e-01 | 79.2% | 77.9% |
| 2iteA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 39.0 | 3.73e-01 | 97.0% | 63.6% |
| 3e38A02 | 2.60.40.3090 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 34.0 | 3.72e-01 | 85.1% | 79.7% |
| 2bv4A00 | 2.60.120.400 | Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin | 0.53 | 35.0 | 3.42e-01 | 95.0% | 59.3% |
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.53 | 40.0 | 3.62e-01 | 81.2% | 77.0% |
| 1c16A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 34.0 | 3.52e-01 | 80.2% | 69.1% |
| 3esiA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 41.0 | 3.89e-01 | 86.1% | 77.4% |
| 4i3gA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.83e-01 | 81.2% | 71.9% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.51 | 26.0 | 3.45e-01 | 97.0% | 100.0% |
| 4i93A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 35.0 | 3.61e-01 | 96.0% | 74.7% |
| 7rskA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.52e-01 | 82.2% | 67.9% |
| 3butA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.38e-01 | 81.2% | 59.2% |
| 3rbsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 30.0 | 3.15e-01 | 79.2% | 63.6% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4954563 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.79 | 63.0 | 6.83e-01 | 96.0% | 100.0% |
| 4031285 | 1.1.13.64 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal | 0.78 | 65.0 | 6.89e-01 | 98.0% | 100.0% |
| 3604610 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.76 | 48.0 | 5.82e-01 | 76.2% | 100.0% |
| 3589736 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.76 | 47.0 | 5.57e-01 | 73.3% | 91.4% |
| 2475124 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 62.0 | 6.40e-01 | 95.0% | 100.0% |
| 2674670 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.72 | 64.0 | 5.33e-01 | 98.0% | 73.3% |
| 3059162 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.72 | 66.0 | 6.12e-01 | 100.0% | 96.0% |
| 2468519 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 61.0 | 6.17e-01 | 95.0% | 98.0% |
| 3949305 | 1.1.13.54 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_L | 0.70 | 64.0 | 5.64e-01 | 100.0% | 95.9% |
| 4988103 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 59.0 | 6.04e-01 | 96.0% | 96.8% |
| 4995815 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 62.0 | 5.79e-01 | 100.0% | 79.2% |
| 4157825 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 62.0 | 5.67e-01 | 98.0% | 93.1% |
| 3504737 | 1.1.13.54 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_L | 0.69 | 62.0 | 5.53e-01 | 98.0% | 96.4% |
| 4379249 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.69 | 56.0 | 5.21e-01 | 98.0% | 70.4% |
| 3944178 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 61.0 | 5.86e-01 | 98.0% | 94.8% |
| 4810019 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.67 | 59.0 | 5.79e-01 | 96.0% | 90.0% |
| 4995818 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 59.0 | 5.57e-01 | 99.0% | 88.0% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.66 | 52.0 | 5.56e-01 | 83.2% | 100.0% |
| 4344991 | 1.1.5.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF | 0.66 | 58.0 | 5.31e-01 | 98.0% | 74.6% |
| 4151877 | 1.1.7.79 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND | 0.66 | 51.0 | 5.03e-01 | 87.1% | 78.1% |
| 184718 | 1.1.13.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_12 | 0.65 | 58.0 | 5.07e-01 | 100.0% | 85.3% |
| 5079559 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.65 | 59.0 | 5.64e-01 | 100.0% | 98.3% |
| 3438815 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.64 | 40.0 | 4.35e-01 | 82.2% | 75.3% |
| 4929587 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.64 | 53.0 | 5.53e-01 | 95.0% | 100.0% |
| 5065295 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.63 | 56.0 | 4.82e-01 | 98.0% | 79.4% |
| 5078836 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 56.0 | 5.52e-01 | 100.0% | 95.5% |
| 4988102 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.63 | 57.0 | 5.54e-01 | 100.0% | 98.2% |
| 184986 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.61 | 54.0 | 5.10e-01 | 99.0% | 97.6% |
| 3886023 | 304.107.1.6 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › POP1_N | 0.61 | 43.0 | 3.31e-01 | 74.3% | 59.6% |
| 2099294 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.60 | 53.0 | 4.77e-01 | 98.0% | 85.9% |
| 3382791 | 60.1.2.2 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C | 0.60 | 52.0 | 3.75e-01 | 98.0% | 59.7% |
| 3653487 | 4.1.1.324 ↗ | beta barrels › SH3 › SH3 › SH3 › Nodulin_C | 0.60 | 43.0 | 4.49e-01 | 97.0% | 84.4% |
| 3165990 | 310.3.1.22 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PF27480, PF30181 | 0.60 | 43.0 | 4.18e-01 | 98.0% | 67.0% |
| 3663962 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.59 | 51.0 | 3.76e-01 | 98.0% | 55.2% |
| 5020258 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.59 | 50.0 | 4.80e-01 | 97.0% | 84.2% |
| 3164699 | 1.1.13.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N | 0.59 | 52.0 | 5.00e-01 | 100.0% | 100.0% |
| 3839205 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.58 | 40.0 | 3.79e-01 | 96.0% | 59.2% |
| 3823591 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 37.0 | 3.72e-01 | 81.2% | 69.0% |
| 4029264 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 37.0 | 3.33e-01 | 99.0% | 51.4% |
| 3335487 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.53 | 41.0 | 3.60e-01 | 85.1% | 78.1% |
| 3671608 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 31.0 | 3.02e-01 | 97.0% | 51.8% |
| 3653384 | 708.1.1.1 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM | 0.52 | 38.0 | 3.34e-01 | 78.2% | 67.7% |
| 3723425 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 39.0 | 2.76e-01 | 79.2% | 27.7% |
| 3934937 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.51 | 43.0 | 3.51e-01 | 92.1% | 67.9% |
| 4937999 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.51 | 35.0 | 3.71e-01 | 89.1% | 82.2% |
| 4055338 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.51 | 45.0 | 4.05e-01 | 100.0% | 92.1% |
D2
high
residues 106-205
Domain cluster:
rep: ON755180.1__UVF61144.1__SEA_AOKA_20__00020__D103-198
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4uhvA02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.72 | 55.0 | 5.69e-01 | 100.0% | 89.1% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.56 | 30.0 | 3.32e-01 | 91.0% | 63.6% |
| 4qkyA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.56 | 33.0 | 3.70e-01 | 88.0% | 77.0% |
| 3c18A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.53 | 29.0 | 2.78e-01 | 84.0% | 46.1% |
| 2x8xX03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.52 | 32.0 | 3.45e-01 | 85.0% | 73.5% |
| 3og5A01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.51 | 33.0 | 3.52e-01 | 88.0% | 76.5% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3248825 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.55 | 32.0 | 2.48e-01 | 70.0% | 28.8% |
| 3400914 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 39.0 | 3.21e-01 | 77.0% | 96.4% |
| 3311453 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.52 | 37.0 | 2.99e-01 | 74.0% | 99.0% |
| 3248950 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 37.0 | 2.71e-01 | 77.0% | 89.0% |
| 4012463 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.50 | 36.0 | 3.07e-01 | 76.0% | 91.9% |
D3
high
residues 218-230_302-366
Domain cluster:
rep: ON755180.1__UVF61144.1__SEA_AOKA_20__00020__D211-224_289-348
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.79 | 74.0 | 5.54e-01 | 100.0% | 46.0% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.74 | 68.0 | 5.29e-01 | 100.0% | 76.2% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.73 | 66.0 | 5.25e-01 | 100.0% | 74.4% |
| 2pb7A01 | 2.30.280.10 | Mainly Beta › Roll › PUA domain-like › SRA-YDG | 0.72 | 64.0 | 4.92e-01 | 100.0% | 63.8% |
| 3q0bX00 | 2.30.280.10 | Mainly Beta › Roll › PUA domain-like › SRA-YDG | 0.72 | 64.0 | 5.20e-01 | 100.0% | 61.5% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.72 | 66.0 | 6.15e-01 | 100.0% | 88.4% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.68 | 63.0 | 4.84e-01 | 100.0% | 50.6% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.68 | 61.0 | 4.96e-01 | 100.0% | 74.1% |
| 1wthD01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 61.0 | 5.48e-01 | 100.0% | 84.0% |
| 4uhvA01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.67 | 58.0 | 4.33e-01 | 96.2% | 45.6% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 41.0 | 4.01e-01 | 83.3% | 59.5% |
| 3in6A02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 58.0 | 5.07e-01 | 100.0% | 88.0% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.65 | 58.0 | 5.00e-01 | 100.0% | 66.4% |
| 1twfB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.64 | 52.0 | 4.47e-01 | 88.5% | 91.1% |
| 2pmzB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.63 | 51.0 | 4.42e-01 | 88.5% | 91.1% |
| 2cc6A00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.63 | 43.0 | 4.63e-01 | 83.3% | 84.4% |
| 1d06A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.62 | 50.0 | 4.25e-01 | 88.5% | 81.5% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.61 | 54.0 | 4.67e-01 | 100.0% | 63.2% |
| 4m4xA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 46.0 | 4.02e-01 | 85.9% | 90.5% |
| 3d4rB02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.59 | 46.0 | 4.88e-01 | 82.1% | 97.1% |
| 3ewkA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 45.0 | 4.12e-01 | 84.6% | 98.1% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 45.0 | 4.51e-01 | 98.7% | 79.3% |
| 2v9kA04 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 44.0 | 3.98e-01 | 82.1% | 64.2% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.58 | 51.0 | 3.77e-01 | 98.7% | 74.8% |
| 3pv7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 4.13e-01 | 93.6% | 68.1% |
| 1blxA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 50.0 | 4.74e-01 | 97.4% | 87.0% |
| 3pg1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 50.0 | 4.20e-01 | 97.4% | 65.1% |
| 2w59A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 4.20e-01 | 93.6% | 68.0% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 43.0 | 4.23e-01 | 93.6% | 75.6% |
| 2bc4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 43.0 | 3.89e-01 | 93.6% | 59.6% |
| 5w2fA01 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.56 | 40.0 | 3.91e-01 | 93.6% | 69.8% |
| 7dl8C01 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.55 | 44.0 | 4.23e-01 | 98.7% | 75.3% |
| 1k8wA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.55 | 44.0 | 3.20e-01 | 89.7% | 52.3% |
| 1qz8A01 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.55 | 48.0 | 4.42e-01 | 100.0% | 74.3% |
| 1e62A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 48.0 | 4.14e-01 | 100.0% | 66.4% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 45.0 | 4.35e-01 | 96.2% | 81.6% |
| 1w99A03 | 2.100.10.10 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain | 0.55 | 43.0 | 3.25e-01 | 83.3% | 98.3% |
| 4frwA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 39.0 | 3.70e-01 | 93.6% | 62.5% |
| 1r3eA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.54 | 43.0 | 3.21e-01 | 89.7% | 56.6% |
| 5w7tA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 46.0 | 4.31e-01 | 97.4% | 77.3% |
| 1qzzA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 46.0 | 3.59e-01 | 96.2% | 83.4% |
| 2ausC02 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.53 | 41.0 | 3.10e-01 | 84.6% | 37.5% |
| 1jj2L00 | 3.40.1120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal protein L15e › Ribosomal protein L15 | 0.52 | 44.0 | 3.34e-01 | 94.9% | 52.1% |
| 2kmwA01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 44.0 | 3.98e-01 | 93.6% | 71.2% |
| 3b5iB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 45.0 | 3.13e-01 | 96.2% | 85.7% |
| 2wdoA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.51 | 38.0 | 3.37e-01 | 83.3% | 99.2% |
ECOD (88)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3981227 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.81 | 66.0 | 6.74e-01 | 100.0% | 90.7% |
| 5082881 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.78 | 72.0 | 6.06e-01 | 100.0% | 92.0% |
| 4957568 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.78 | 72.0 | 7.00e-01 | 100.0% | 91.8% |
| 3511358 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 69.0 | 6.38e-01 | 100.0% | 89.0% |
| 4094235 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.74 | 67.0 | 5.70e-01 | 98.7% | 66.4% |
| 3502370 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.74 | 68.0 | 5.30e-01 | 100.0% | 83.1% |
| 4929752 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.74 | 67.0 | 5.29e-01 | 100.0% | 76.1% |
| 5002753 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 66.0 | 6.41e-01 | 100.0% | 89.4% |
| 1914511 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.73 | 66.0 | 5.57e-01 | 98.7% | 63.0% |
| 2595159 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.73 | 66.0 | 5.12e-01 | 100.0% | 72.9% |
| 3967003 | 1.1.13.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_11 | 0.73 | 65.0 | 5.38e-01 | 100.0% | 86.4% |
| 3977123 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.73 | 66.0 | 5.17e-01 | 100.0% | 75.0% |
| 4929587 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 66.0 | 6.31e-01 | 100.0% | 96.7% |
| 4888726 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.72 | 65.0 | 5.07e-01 | 100.0% | 75.0% |
| 4036849 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.72 | 66.0 | 5.44e-01 | 100.0% | 63.2% |
| 5002750 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 65.0 | 5.86e-01 | 100.0% | 86.7% |
| 3264744 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.72 | 65.0 | 4.96e-01 | 100.0% | 75.4% |
| 2642579 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.71 | 63.0 | 5.35e-01 | 100.0% | 85.4% |
| 4888819 | 1.1.13.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_1 | 0.71 | 64.0 | 5.69e-01 | 100.0% | 86.5% |
| 3969448 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 64.0 | 5.76e-01 | 100.0% | 98.1% |
| 4319057 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.71 | 63.0 | 5.52e-01 | 98.7% | 69.6% |
| 3256920 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 64.0 | 5.45e-01 | 100.0% | 75.2% |
| 4964155 | 1.1.9.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › SRA_ScoMcrA | 0.70 | 63.0 | 5.16e-01 | 100.0% | 64.3% |
| 3967435 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.69 | 63.0 | 5.91e-01 | 100.0% | 89.5% |
| 4344991 | 1.1.5.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF | 0.69 | 62.0 | 5.23e-01 | 100.0% | 69.2% |
| 4247994 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.68 | 62.0 | 5.73e-01 | 100.0% | 97.0% |
| 4393593 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.68 | 63.0 | 5.85e-01 | 100.0% | 92.6% |
| 3909822 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 62.0 | 5.48e-01 | 100.0% | 82.7% |
| 3970827 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 62.0 | 6.07e-01 | 100.0% | 96.5% |
| 3943689 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 61.0 | 5.46e-01 | 100.0% | 81.8% |
| 3966429 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.68 | 62.0 | 5.93e-01 | 100.0% | 96.7% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.68 | 61.0 | 5.97e-01 | 98.7% | 96.5% |
| 3972305 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 62.0 | 5.93e-01 | 100.0% | 96.7% |
| 3966280 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 62.0 | 5.80e-01 | 100.0% | 89.5% |
| 4538400 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.67 | 60.0 | 5.03e-01 | 98.7% | 66.9% |
| 3968713 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.67 | 61.0 | 5.85e-01 | 100.0% | 93.3% |
| 4444321 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.66 | 61.0 | 4.35e-01 | 100.0% | 36.7% |
| 3944430 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.66 | 59.0 | 5.35e-01 | 100.0% | 82.9% |
| 3369437 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.66 | 60.0 | 4.15e-01 | 100.0% | 32.8% |
| 3728982 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.64 | 51.0 | 4.25e-01 | 84.6% | 91.5% |
| 4976162 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.64 | 50.0 | 4.29e-01 | 83.3% | 95.8% |
| 5070341 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.64 | 50.0 | 4.27e-01 | 84.6% | 95.2% |
| 3792089 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.64 | 50.0 | 4.16e-01 | 84.6% | 92.6% |
| 3786933 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.63 | 50.0 | 4.26e-01 | 84.6% | 94.4% |
| 4030042 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.63 | 50.0 | 4.17e-01 | 84.6% | 92.5% |
| 3491434 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.62 | 49.0 | 4.14e-01 | 84.6% | 96.9% |
| 3907134 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.62 | 54.0 | 3.93e-01 | 97.4% | 36.4% |
| 4938551 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.62 | 54.0 | 5.22e-01 | 100.0% | 90.0% |
| 5061311 | 328.5.1.6 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › DUF2249 | 0.62 | 41.0 | 4.35e-01 | 100.0% | 77.1% |
| 3688095 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 51.0 | 4.46e-01 | 97.4% | 62.5% |
| 4558386 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.59 | 47.0 | 3.52e-01 | 89.7% | 59.3% |
| 4103990 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.59 | 46.0 | 3.38e-01 | 87.2% | 58.7% |
| 4446394 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.59 | 51.0 | 3.61e-01 | 100.0% | 33.5% |
| 4931484 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.59 | 47.0 | 3.46e-01 | 89.7% | 59.6% |
| 4933784 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.59 | 46.0 | 3.40e-01 | 87.2% | 61.9% |
| None | — | 0.58 | 44.0 | 3.28e-01 | 100.0% | 33.0% | |
| 3546177 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.58 | 51.0 | 3.62e-01 | 98.7% | 34.9% |
| 5031633 | 304.8.1.118 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › TruB_C_2 | 0.57 | 45.0 | 3.77e-01 | 89.7% | 60.7% |
| 4935771 | 304.8.1.121 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Pus10_C | 0.57 | 46.0 | 3.31e-01 | 89.7% | 54.3% |
| 4945745 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.57 | 46.0 | 3.30e-01 | 89.7% | 54.2% |
| 4275176 | 304.102.1.5 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,DKCLD,TruB_C_2 | 0.57 | 45.0 | 3.36e-01 | 89.7% | 39.6% |
| 5063453 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.57 | 46.0 | 3.31e-01 | 89.7% | 53.5% |
| 3994102 | 389.4.1.7 ↗ | few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 | 0.57 | 38.0 | 3.95e-01 | 98.7% | 75.7% |
| 5024648 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.57 | 45.0 | 3.34e-01 | 89.7% | 57.4% |
| 3220081 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.57 | 45.0 | 3.24e-01 | 89.7% | 54.1% |
| 4591715 | 304.102.1.5 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,DKCLD,TruB_C_2 | 0.57 | 46.0 | 3.32e-01 | 89.7% | 38.3% |
| 4103518 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.57 | 45.0 | 3.36e-01 | 89.7% | 58.6% |
| 5001314 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.57 | 45.0 | 3.25e-01 | 89.7% | 37.6% |
| 3232202 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 48.0 | 3.96e-01 | 93.6% | 62.9% |
| 4197562 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.56 | 45.0 | 3.28e-01 | 91.0% | 51.4% |
| 4632892 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.56 | 45.0 | 3.30e-01 | 89.7% | 55.7% |
| 4943359 | 304.102.1.13 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_C_2 | 0.56 | 45.0 | 3.30e-01 | 89.7% | 38.7% |
| 4077036 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.56 | 45.0 | 3.31e-01 | 89.7% | 40.0% |
| 4557453 | 304.102.1.9 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N, DKCLD, TruB_C_2, Pus10_C | 0.56 | 44.0 | 3.23e-01 | 89.7% | 37.1% |
| 5033279 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.56 | 44.0 | 3.24e-01 | 89.7% | 37.9% |
| 5019301 | 304.102.1.13 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_C_2 | 0.56 | 44.0 | 3.21e-01 | 89.7% | 36.4% |
| 5036917 | 304.102.1.13 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_C_2 | 0.56 | 44.0 | 3.67e-01 | 89.7% | 60.7% |
| 4030345 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.55 | 43.0 | 3.19e-01 | 89.7% | 57.3% |
| 3990367 | 389.4.1.7 ↗ | few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 | 0.54 | 38.0 | 3.78e-01 | 97.4% | 71.2% |
| 4054945 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.54 | 45.0 | 3.25e-01 | 94.9% | 52.2% |
| 4028779 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.53 | 44.0 | 3.06e-01 | 94.9% | 53.0% |
| 5058399 | 256.1.1.1 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease | 0.53 | 43.0 | 3.63e-01 | 100.0% | 53.1% |
| 4649925 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.52 | 42.0 | 3.20e-01 | 91.0% | 58.5% |
| 4646504 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.51 | 41.0 | 3.14e-01 | 91.0% | 54.0% |
| 3251331 | 11.1.5.109 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PF28397 | 0.51 | 43.0 | 3.28e-01 | 93.6% | 49.7% |
| 4503008 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.51 | 42.0 | 3.20e-01 | 94.9% | 54.0% |
| 4223490 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.50 | 42.0 | 3.17e-01 | 96.2% | 61.4% |
| 4254304 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.50 | 40.0 | 2.99e-01 | 91.0% | 47.6% |
D4
high
residues 232-299
Domain cluster:
rep: ON755180.1__UVF61144.1__SEA_AOKA_20__00020__D231-283
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cddB03 | 3.30.1920.10 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold | 0.80 | 64.0 | 6.88e-01 | 100.0% | 98.3% |
| 1wruA03 | 3.30.1920.10 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold | 0.80 | 61.0 | 6.66e-01 | 100.0% | 98.2% |
| 4uhvA03 | 4.10.220.110 | Few Secondary Structures › Irregular › Light-harvesting Protein › | 0.67 | 56.0 | 5.77e-01 | 94.1% | 100.0% |
| 4ifeA02 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.55 | 41.0 | 2.93e-01 | 98.5% | 24.7% |
| 4lniJ01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.54 | 38.0 | 3.31e-01 | 75.0% | 81.7% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4049733 | 3071.1.1.8 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › YQBQ | 0.86 | 75.0 | 7.69e-01 | 100.0% | 98.5% |
| 5002661 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.80 | 70.0 | 7.21e-01 | 98.5% | 98.5% |
| 119096 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.79 | 61.0 | 6.68e-01 | 100.0% | 100.0% |
| 5041374 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.76 | 69.0 | 6.90e-01 | 100.0% | 100.0% |
| 3980575 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.74 | 67.0 | 6.64e-01 | 100.0% | 98.6% |
| 3964699 | 3071.1.1.6 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › Phage-tail_3 | 0.74 | 68.0 | 6.74e-01 | 100.0% | 97.1% |
| 3978574 | 3071.1.1.1 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › Phage_GPD | 0.74 | 64.0 | 6.58e-01 | 98.5% | 100.0% |
| 2468520 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.72 | 65.0 | 6.26e-01 | 100.0% | 98.7% |
| 4957567 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.71 | 64.0 | 6.36e-01 | 100.0% | 98.6% |
| None | — | 0.54 | 45.0 | 2.63e-01 | 98.5% | 41.3% | |
| 3996171 | 311.1.1.2 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Band_3_cyto | 0.54 | 45.0 | 3.18e-01 | 100.0% | 80.8% |
| 4927129 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.54 | 36.0 | 3.22e-01 | 77.9% | 47.0% |
| 3250603 | 221.1.1.19 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DCX | 0.54 | 34.0 | 3.09e-01 | 75.0% | 44.0% |
| 5081355 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 32.0 | 2.83e-01 | 77.9% | 39.0% |
| 3258650 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.53 | 37.0 | 3.53e-01 | 72.1% | 96.2% |
| 5011840 | 2003.1.2.40 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored | 0.53 | 44.0 | 2.82e-01 | 98.5% | 72.8% |
| 3505861 | 2484.1.1.204 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 | 0.53 | 44.0 | 3.06e-01 | 100.0% | 28.6% |
| 2391550 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.52 | 37.0 | 3.18e-01 | 75.0% | 81.3% |
| 2557339 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.51 | 36.0 | 3.15e-01 | 75.0% | 78.7% |
| 5038158 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 37.0 | 2.74e-01 | 79.4% | 44.1% |
| 4230721 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.50 | 37.0 | 3.37e-01 | 79.4% | 89.5% |
| 3979705 | 2484.1.1.248 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › GpA_nuclease | 0.50 | 41.0 | 2.95e-01 | 100.0% | 36.5% |