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MK416015.1__QBP07955.1__X__00037

Bact-Vir

MK416015.1__QBP07955.1__X__00037

Identity

Accession:
MK416015 ↗
Kingdom:
phage

Quality

85.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Peduoviridae› Reipivirus› Klebsiella_phage_ST16-OXA48phi5.4

TaxID: 2510483

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-138
PDB
Domain cluster: rep: ON615601.1__UTS51982.1__X__00034__D5-121
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12571.14 best Phage_tail_fib 46.6 5.00e-12 100.0% 86.7%
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jwyA01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.56 42.0 4.21e-01 85.0% 77.0%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 29.0 2.83e-01 94.7% 43.9%
3qwnA02 2.60.40.2370 Mainly Beta › Sandwich › Immunoglobulin-like › NigD-like, C-terminal beta sandwich domain 0.54 41.0 4.13e-01 100.0% 77.6%
2rjzA02 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.54 38.0 4.34e-01 90.2% 100.0%
3mwxA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 42.0 3.15e-01 82.7% 93.2%
8owfA01 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 38.0 4.14e-01 81.2% 89.2%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 23.0 3.20e-01 76.7% 85.0%
3ehcB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 4.13e-01 86.5% 85.9%
2k54A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 38.0 3.97e-01 87.2% 82.9%
2r5oA01 2.70.50.60 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › abc- transporter (atp binding component) like domain 0.51 41.0 3.96e-01 85.0% 86.8%
2htaA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 43.0 3.35e-01 92.5% 99.3%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.50 40.0 4.20e-01 85.0% 96.7%
1sjwA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 39.0 3.89e-01 83.5% 79.6%
4c92G00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.50 25.0 3.18e-01 80.5% 82.7%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4928608 3899.1.1.0 ↗ beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 0.85 72.0 6.68e-01 94.7% 73.6%
4932865 3899.1.1.0 ↗ beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 0.81 72.0 7.13e-01 94.0% 88.6%
5082784 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 34.0 3.99e-01 98.5% 83.3%
3188712 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.56 37.0 4.16e-01 94.0% 88.0%
3285561 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.53 33.0 3.54e-01 100.0% 72.7%
4614716 4.1.1.292 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 0.51 25.0 3.32e-01 76.7% 87.1%
3471723 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.50 35.0 3.74e-01 97.7% 80.0%
4018488 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.50 40.0 3.46e-01 85.7% 75.3%
D2 medium residues 209-265
PDB
Domain cluster: representative
D3 medium residues 266-365
PDB
Domain cluster: representative