←Back to structures

MK416021.1__QBP07765.1__X__00007

Bact-Vir

MK416021.1__QBP07765.1__X__00007

Identity

Accession:
MK416021 ↗
Kingdom:
phage

Quality

89.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Klebsiella_phage_ST846-OXA48phi9.1

TaxID: 2510488

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-167
PDB
Domain cluster: rep: NC_007917.1__YP_529628.1__CDBPCV119_gp77__00077__D10-195
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d79A01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.53 25.0 3.55e-01 86.1% 97.3%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3449821 73.1.1.0 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.54 24.0 2.83e-01 84.2% 54.8%
3645476 295.1.1.1 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.50 26.0 3.21e-01 100.0% 80.0%
D2 high residues 180-282
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kafA00 3.90.1150.20 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain 0.63 45.0 4.46e-01 73.8% 98.1%
1sqgA03 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.60 31.0 3.88e-01 81.6% 86.2%
1jg8A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 40.0 4.18e-01 74.8% 93.8%
3ez2A01 1.10.1660.30 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.52 31.0 3.50e-01 86.4% 82.9%
2anrA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.51 34.0 3.80e-01 73.8% 92.0%
6l2cB00 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.50 37.0 2.55e-01 78.6% 55.4%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1192794 3016.1.1.2 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 0.61 43.0 4.50e-01 73.8% 94.7%
4937597 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.60 31.0 3.81e-01 81.6% 83.3%
3345571 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.57 40.0 3.94e-01 73.8% 78.3%
4995220 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.57 40.0 4.05e-01 72.8% 95.0%
4338727 3016.1.1.10 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › GDC-P 0.54 37.0 4.19e-01 87.4% 96.0%
4589701 3016.1.1.10 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › GDC-P 0.54 34.0 3.75e-01 84.5% 80.0%
3639594 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.52 30.0 3.69e-01 81.6% 96.7%
5081509 4955.1.1.0 ↗ a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.51 35.0 3.83e-01 84.5% 90.0%