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MK422451.1__QBP27488.1__X__00042
Bact-VirMK422451.1__QBP27488.1__X__00042
Identity
- Accession:
- MK422451 ↗
- Kingdom:
- phage
Quality
73.5
mean pLDDT
Taxonomy
TaxID: 2510466
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-165
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ee2A00 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.62 | 52.0 | 5.38e-01 | 91.5% | 96.7% |
| 2o62A02 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 50.0 | 4.95e-01 | 88.5% | 92.7% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.59 | 33.0 | 4.02e-01 | 96.2% | 89.5% |
| 2zf3C00 | 2.50.20.30 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.59 | 52.0 | 4.67e-01 | 97.7% | 97.3% |
| 3bdrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 48.0 | 4.53e-01 | 88.5% | 94.9% |
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.58 | 52.0 | 4.30e-01 | 98.5% | 92.3% |
| 1iwmA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.57 | 47.0 | 4.25e-01 | 89.2% | 89.3% |
| 4z48A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.56 | 50.0 | 4.12e-01 | 99.2% | 92.1% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 36.0 | 4.24e-01 | 83.8% | 98.8% |
| 4bboA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.56 | 44.0 | 4.72e-01 | 87.7% | 98.2% |
| 4ifsA01 | 2.30.29.150 | Mainly Beta › Roll › PH-domain like › | 0.55 | 37.0 | 3.75e-01 | 90.0% | 68.2% |
| 2yj6A02 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.55 | 39.0 | 4.42e-01 | 87.7% | 100.0% |
| 4gzvA00 | 2.40.128.490 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 | 0.53 | 44.0 | 4.40e-01 | 92.3% | 93.5% |
| 1xuvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 42.0 | 3.94e-01 | 86.9% | 75.5% |
| 1r0uA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 43.0 | 4.26e-01 | 91.5% | 94.4% |
| 6ka3A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 42.0 | 4.09e-01 | 87.7% | 83.7% |
| 1vjhA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 35.0 | 3.70e-01 | 83.8% | 75.0% |
| 4l8hB00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.51 | 37.0 | 3.80e-01 | 73.1% | 85.4% |
| 1kdgA02 | 3.30.410.10 | Alpha Beta › 2-Layer Sandwich › Cholesterol Oxidase; domain 2 › Cholesterol Oxidase; domain 2 | 0.50 | 34.0 | 2.98e-01 | 70.0% | 80.4% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3425387 | 9.3.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › DUF2921_N | 0.70 | 58.0 | 5.24e-01 | 87.7% | 93.7% |
| 3805924 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.67 | 58.0 | 5.18e-01 | 93.8% | 90.3% |
| 3823935 | 9.2.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF2921_N | 0.67 | 56.0 | 4.87e-01 | 88.5% | 80.5% |
| 3318130 | 9.2.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF2921_N | 0.65 | 55.0 | 5.17e-01 | 89.2% | 95.5% |
| 3371614 | 5084.1.1.27 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2921_N | 0.65 | 55.0 | 5.15e-01 | 89.2% | 93.5% |
| 3263743 | 9.2.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin | 0.65 | 53.0 | 5.42e-01 | 87.7% | 97.6% |
| 3330367 | 9.2.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF2921_N | 0.65 | 54.0 | 4.77e-01 | 88.5% | 87.0% |
| 3749834 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.65 | 29.0 | 4.21e-01 | 76.2% | 98.2% |
| 3339862 | 9.3.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › DUF2921_N | 0.65 | 54.0 | 4.78e-01 | 87.7% | 86.1% |
| 3433424 | 9.3.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › DUF2921_N | 0.64 | 53.0 | 4.67e-01 | 87.7% | 82.1% |
| 4292366 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.64 | 53.0 | 4.74e-01 | 89.2% | 92.4% |
| 3237402 | 5084.4.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Outer membrane phospholipase A (OMPLA) › Outer membrane phospholipase A (OMPLA) › DUF7042 | 0.64 | 54.0 | 5.20e-01 | 89.2% | 82.1% |
| 3399941 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.64 | 54.0 | 5.59e-01 | 91.5% | 97.5% |
| 3512127 | 220.1.1.9 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Voldacs | 0.60 | 42.0 | 4.45e-01 | 88.5% | 80.9% |
| 4294796 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.60 | 50.0 | 4.55e-01 | 89.2% | 94.7% |
| 3599332 | 219.1.1.53 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Vasohibin | 0.57 | 37.0 | 2.97e-01 | 91.5% | 30.9% |
| 4666231 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.56 | 43.0 | 3.91e-01 | 79.2% | 92.6% |
| 1548777 | 71.1.1.8 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like | 0.56 | 50.0 | 4.12e-01 | 99.2% | 92.1% |
| 3713382 | 220.1.1.19 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle | 0.56 | 37.0 | 4.07e-01 | 88.5% | 82.9% |
| 437290 | 9.2.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin | 0.54 | 44.0 | 4.35e-01 | 89.2% | 82.6% |
| 3464885 | 331.3.1.1 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Bet_v_1 | 0.53 | 42.0 | 4.07e-01 | 86.9% | 84.0% |
| 3186460 | 708.1.2.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › NTP_transf_9 | 0.52 | 33.0 | 3.63e-01 | 97.7% | 78.1% |
| 6304 | 331.3.1.1 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Bet_v_1 | 0.52 | 35.0 | 3.70e-01 | 83.8% | 75.0% |
| 4014855 | 3385.1.1.0 ↗ | beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 | 0.50 | 40.0 | 3.93e-01 | 86.2% | 93.1% |
| 4025179 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.50 | 38.0 | 3.31e-01 | 80.0% | 89.8% |
| 5078972 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.50 | 31.0 | 3.69e-01 | 80.0% | 92.9% |