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MK422453.1__QBP27606.1__X__00016

Bact-Vir

MK422453.1__QBP27606.1__X__00016

Identity

Accession:
MK422453 ↗
Kingdom:
phage

Quality

88.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Peduoviridae› Dagavirus› Klebsiella_phage_ST13-OXA48phi12.1

TaxID: 2510464

Cluster

View cluster (77 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 28-77_202-245
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1m3qA01 3.30.310.40 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.57 29.0 3.03e-01 93.6% 49.4%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3707066 10.1.1.56 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.68 61.0 4.67e-01 100.0% 95.3%
3958906 304.105.1.0 ↗ a+b two layers › Alpha-beta plaits › Hypothetical protein Ta1353 › Hypothetical protein Ta1353 0.58 39.0 3.52e-01 98.9% 49.2%
D2 medium residues 78-201
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r16A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.82 66.0 5.81e-01 100.0% 60.0%
2jd4A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.79 63.0 5.58e-01 100.0% 59.7%
3v0aB03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.77 65.0 5.43e-01 100.0% 54.1%
4dqaA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.73 60.0 4.96e-01 100.0% 50.7%
8b55A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.73 62.0 5.39e-01 100.0% 62.0%
2sliA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.73 68.0 5.75e-01 100.0% 63.3%
2zzjA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.71 65.0 5.22e-01 100.0% 56.7%
4bpzA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.70 64.0 5.05e-01 100.0% 53.4%
3pijA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.70 58.0 5.48e-01 100.0% 74.5%
1upsB01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.69 63.0 4.87e-01 100.0% 47.2%
6v55A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.68 57.0 4.87e-01 100.0% 56.9%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.67 53.0 4.62e-01 100.0% 55.6%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.65 58.0 5.00e-01 100.0% 62.1%
1st8A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.64 58.0 5.06e-01 100.0% 78.9%
4agrB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 53.0 5.12e-01 100.0% 79.9%
3wucB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 51.0 4.95e-01 100.0% 81.0%
2zgoA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 53.0 4.82e-01 100.0% 70.1%
7b2sA01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.61 50.0 4.71e-01 100.0% 71.6%
1yrzA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 55.0 4.66e-01 100.0% 62.4%
4m00A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 55.0 4.45e-01 100.0% 70.6%
1fx5B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 54.0 4.41e-01 100.0% 66.9%
4xw3A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.60 47.0 4.14e-01 100.0% 55.3%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 24.0 3.26e-01 94.4% 83.1%
7qs4A01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.53 46.0 4.11e-01 100.0% 67.0%
1ah5A03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.53 35.0 3.98e-01 86.3% 96.5%
2vz8A04 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.52 42.0 3.32e-01 94.4% 42.1%
2xmoA01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.51 42.0 3.13e-01 88.7% 99.7%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 22.0 2.99e-01 82.3% 82.8%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3867088 10.1.1.1 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.82 66.0 5.70e-01 100.0% 57.8%
3402727 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.81 66.0 5.73e-01 100.0% 58.3%
3485291 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.81 66.0 5.47e-01 100.0% 51.7%
3544780 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.80 65.0 5.62e-01 100.0% 57.4%
5012885 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.80 65.0 5.31e-01 100.0% 48.6%
3879408 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.79 64.0 5.44e-01 100.0% 55.3%
4941646 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.78 65.0 5.15e-01 100.0% 46.0%
4937478 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.78 64.0 5.30e-01 100.0% 51.0%
4004122 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.75 64.0 5.10e-01 100.0% 48.3%
3246415 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.74 59.0 5.91e-01 95.2% 82.4%
5061004 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.74 64.0 5.22e-01 100.0% 51.8%
3507416 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.74 66.0 5.68e-01 100.0% 62.6%
3909185 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.73 62.0 5.18e-01 100.0% 55.1%
3389881 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.72 66.0 5.42e-01 100.0% 57.1%
3534125 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.72 63.0 5.12e-01 100.0% 51.6%
3482455 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.72 63.0 5.21e-01 100.0% 55.2%
4032561 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.71 65.0 5.25e-01 100.0% 60.4%
3516909 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.71 61.0 5.40e-01 100.0% 65.7%
4121558 10.1.1.25 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Toxin_R_bind_N 0.71 66.0 5.02e-01 100.0% 47.0%
3900153 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.70 63.0 5.53e-01 100.0% 68.0%
1269331 10.1.1.26 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C 0.70 58.0 5.30e-01 100.0% 68.5%
3991050 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.69 61.0 5.20e-01 100.0% 61.1%
3229460 10.1.1.91 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF29324 0.68 64.0 5.15e-01 100.0% 56.8%
3424631 10.1.1.2 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.67 62.0 4.78e-01 100.0% 67.5%
2491351 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.67 60.0 4.85e-01 100.0% 55.2%
3414786 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.66 62.0 4.99e-01 100.0% 57.8%
3900157 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.66 59.0 4.92e-01 100.0% 56.7%
3376236 10.1.1.26 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C 0.65 59.0 5.03e-01 100.0% 75.0%
3204303 10.1.1.22 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF1349 0.65 58.0 4.91e-01 100.0% 64.3%
3599615 10.1.1.26 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C 0.64 58.0 5.01e-01 100.0% 71.1%
2905297 10.1.1.41 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › GH43_C2 0.63 56.0 4.82e-01 100.0% 62.9%
3722618 10.1.1.26 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C 0.63 57.0 5.15e-01 100.0% 73.5%
3837684 10.1.1.2 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.62 56.0 4.54e-01 100.0% 66.7%
3598280 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 51.0 5.04e-01 100.0% 85.4%
3593631 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.61 49.0 4.54e-01 100.0% 66.7%
3705756 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.61 49.0 4.63e-01 100.0% 70.7%
3708862 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.59 48.0 4.55e-01 100.0% 73.2%
3883864 10.1.1.9 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.59 49.0 4.32e-01 100.0% 61.1%
3903497 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.59 53.0 4.64e-01 100.0% 71.4%
3415854 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.59 48.0 4.16e-01 100.0% 57.4%
3226200 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 52.0 4.73e-01 100.0% 74.7%
3194191 5.1.4.97 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop 0.55 44.0 2.95e-01 86.3% 60.4%
3396976 5.1.3.11 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › MRJP 0.53 44.0 3.13e-01 91.9% 77.3%
4013607 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 47.0 4.03e-01 100.0% 64.4%
3231704 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.50 26.0 3.48e-01 99.2% 95.4%