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MK433269.1__QAY17186.1__SEA_MADAMATO_68__00068
Bact-VirMK433269.1__QAY17186.1__SEA_MADAMATO_68__00068
Identity
- Accession:
- MK433269 ↗
- Kingdom:
- phage
Quality
77.0
mean pLDDT
Taxonomy
TaxID: 2510517
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-53
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 52.0 | 4.72e-01 | 100.0% | 73.8% |
| 5vmzA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.60 | 39.0 | 4.13e-01 | 100.0% | 79.5% |
| 3d1cA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 43.0 | 2.71e-01 | 83.0% | 50.6% |
| 2yuuA00 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.57 | 48.0 | 4.09e-01 | 100.0% | 65.1% |
| 4qrlA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 40.0 | 3.23e-01 | 80.9% | 56.4% |
| 3fewX01 | 4.10.80.380 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › | 0.56 | 40.0 | 4.01e-01 | 85.1% | 94.2% |
| 3d89A00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.55 | 46.0 | 3.38e-01 | 97.9% | 77.2% |
| 2atcB02 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.53 | 44.0 | 4.36e-01 | 100.0% | 96.2% |
| 1mdbA03 | 2.30.38.10 | Mainly Beta › Roll › Luciferase; domain 3 › Luciferase; Domain 3 | 0.52 | 36.0 | 3.21e-01 | 74.5% | 88.2% |
| 4y85C01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 41.0 | 3.21e-01 | 95.7% | 85.5% |
| 1upsA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 43.0 | 3.23e-01 | 100.0% | 82.0% |
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 42.0 | 3.41e-01 | 100.0% | 59.4% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3353445 | 71.1.1.14 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › GPCR_chapero_1 | 0.70 | 53.0 | 3.38e-01 | 85.1% | 36.7% |
| 3660680 | 109.3.1.348 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › ANKRD13_C | 0.70 | 53.0 | 3.09e-01 | 85.1% | 26.3% |
| 3396514 | 386.1.1.259 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF29169 | 0.62 | 43.0 | 4.44e-01 | 100.0% | 80.0% |
| 3876524 | 386.1.1.303 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF29350 | 0.62 | 40.0 | 3.98e-01 | 100.0% | 63.3% |
| 5031337 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.61 | 42.0 | 4.41e-01 | 83.0% | 87.2% |
| 3482645 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.61 | 41.0 | 4.42e-01 | 83.0% | 97.1% |
| 4053431 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.60 | 43.0 | 4.19e-01 | 80.9% | 78.2% |
| 4927544 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 40.0 | 4.23e-01 | 83.0% | 94.3% |
| 3819668 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.59 | 40.0 | 4.09e-01 | 83.0% | 77.3% |
| 4948719 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.57 | 43.0 | 3.45e-01 | 85.1% | 84.0% |
| 3992030 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 39.0 | 3.11e-01 | 91.5% | 31.8% |
| 4932814 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 39.0 | 4.14e-01 | 91.5% | 100.0% |
| 3991587 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 39.0 | 4.06e-01 | 91.5% | 90.0% |
| 4992408 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 42.0 | 4.34e-01 | 83.0% | 88.9% |
| 3833354 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.56 | 45.0 | 4.37e-01 | 95.7% | 98.2% |
| 4515794 | 375.1.1.11 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_S27 | 0.56 | 37.0 | 3.63e-01 | 85.1% | 60.0% |
| 3967552 | 375.1.1.71 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF2387 | 0.55 | 40.0 | 4.12e-01 | 91.5% | 86.7% |
| 5061180 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.55 | 40.0 | 3.35e-01 | 85.1% | 75.8% |
| 3612107 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.55 | 41.0 | 3.82e-01 | 83.0% | 70.0% |
| 5058552 | 375.1.1.83 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB | 0.54 | 38.0 | 3.78e-01 | 87.2% | 74.0% |
| 3240040 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.54 | 41.0 | 3.99e-01 | 87.2% | 94.5% |
| 3935041 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.54 | 43.0 | 4.24e-01 | 91.5% | 100.0% |
| 3781329 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 41.0 | 3.59e-01 | 100.0% | 53.8% |
| 3399001 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.53 | 38.0 | 3.33e-01 | 80.9% | 72.5% |
| 4461425 | 375.1.1.213 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TiaS | 0.53 | 38.0 | 3.94e-01 | 95.7% | 77.8% |
| 5061079 | 4294.1.1.13 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Zn_ribbon_TFIIB | 0.53 | 36.0 | 3.72e-01 | 87.2% | 82.2% |
| 4989457 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 41.0 | 4.09e-01 | 100.0% | 98.0% |
| 3802925 | 4.1.1.296 ↗ | beta barrels › SH3 › SH3 › SH3 › TDBD | 0.51 | 42.0 | 3.62e-01 | 100.0% | 57.5% |
| 3893163 | 5.1.2.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40 | 0.50 | 39.0 | 2.96e-01 | 93.6% | 42.2% |