Back to structures

MK433579.1__QBP27800.1__X__00005

Bact-Vir

MK433579.1__QBP27800.1__X__00005

Identity

Accession:
MK433579 ↗
Kingdom:
phage

Quality

77.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 44-102
PDB
D2 high residues 113-154
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uzbA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.77 53.0 3.13e-01 73.8% 58.0%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.76 67.0 5.04e-01 100.0% 76.2%
2bskE00 1.10.287.810 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains 0.76 60.0 5.24e-01 88.1% 73.0%
3qc7A02 6.10.140.1630 Special › Helix non-globular › Helix Hairpins › 0.69 50.0 4.71e-01 78.6% 64.7%
2gumA02 1.20.5.1890 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.67 51.0 3.92e-01 95.2% 35.6%
3hbjA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.61 48.0 2.94e-01 88.1% 17.5%
3mzkB03 1.20.58.940 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 42.0 3.59e-01 73.8% 87.1%
3h51A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 43.0 3.09e-01 88.1% 42.3%
2c42A01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.57 44.0 2.83e-01 97.6% 35.0%
2ka6B00 6.10.250.3310 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › signal transducer and activator of transcription 1 0.52 29.0 2.86e-01 88.1% 48.9%
2gmsB01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.52 41.0 2.59e-01 90.5% 94.3%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3313517 7013.1.1.1 alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 0.80 67.0 4.53e-01 92.9% 30.7%
3598299 5081.1.1.0 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like 0.78 58.0 3.65e-01 81.0% 60.5%
3583582 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.77 63.0 3.88e-01 90.5% 17.9%
3213064 5054.1.1.2 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans 0.77 62.0 3.70e-01 92.9% 44.8%
3562264 219.1.1.112 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 0.76 66.0 3.82e-01 95.2% 97.1%
4807858 304.48.1.11 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol 0.75 61.0 5.60e-01 88.1% 73.6%
4980557 140.1.1.0 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.74 63.0 4.03e-01 100.0% 29.0%
4076048 2492.1.1.4 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.72 65.0 4.07e-01 100.0% 21.4%
5002496 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 49.0 3.30e-01 85.7% 75.3%
4990041 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.63 56.0 3.64e-01 100.0% 34.6%
3501037 2011.2.1.7 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 0.61 46.0 2.96e-01 100.0% 14.5%
3670671 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.56 45.0 3.25e-01 100.0% 33.8%