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MK443265.1__QBJ04712.1__JHP_0081__00081

Bact-Vir

MK443265.1__QBJ04712.1__JHP_0081__00081

Identity

Accession:
MK443265 ↗
Kingdom:
phage

Quality

72.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-48
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kf6A04 4.10.80.40 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain 0.63 40.0 4.32e-01 93.8% 85.7%
2xzmZ00 3.30.1230.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 0.60 42.0 3.44e-01 87.5% 38.1%
3j7aZ00 3.30.1230.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 0.59 42.0 3.74e-01 87.5% 51.4%
2lfeA00 2.60.40.2840 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 36.0 2.90e-01 77.1% 28.3%
7rxpA01 2.20.100.10 Mainly Beta › Single Sheet › TSP-1 type 1 repeat › Thrombospondin type-1 (TSP1) repeat 0.56 37.0 3.54e-01 72.9% 55.9%
4mb8D00 3.10.270.10 Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; 0.54 42.0 2.73e-01 97.9% 52.1%
3gqwB01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.53 44.0 2.61e-01 97.9% 21.3%
7kggC02 3.30.2090.10 Alpha Beta › 2-Layer Sandwich › Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains › Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.52 35.0 3.06e-01 77.1% 100.0%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3205307 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.58 43.0 2.98e-01 85.4% 22.1%