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MK448231.1__QBP28405.1__X__00061

Bact-Vir

MK448231.1__QBP28405.1__X__00061

Identity

Accession:
MK448231 ↗
Kingdom:
phage

Quality

87.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-70
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13560.13 best HTH_31 35.6 1.30e-08 90.6% 85.9%
PF01381.29 HTH_3 51.8 9.40e-14 85.9% 98.2%
CATH (75)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y7yA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.95 85.0 8.24e-01 95.3% 87.0%
3zhiA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.93 83.0 7.93e-01 95.3% 95.9%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.92 76.0 6.73e-01 96.9% 64.0%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.92 87.0 7.78e-01 100.0% 78.8%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.91 83.0 8.37e-01 98.4% 98.4%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.91 83.0 8.26e-01 98.4% 95.5%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.91 82.0 8.15e-01 98.4% 93.9%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.91 85.0 7.06e-01 100.0% 87.4%
3u3wA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.90 80.0 7.81e-01 96.9% 88.4%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.90 81.0 7.11e-01 98.4% 68.9%
2l49B01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.90 71.0 7.69e-01 82.8% 100.0%
4jcyA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.90 83.0 7.23e-01 100.0% 80.4%
3pxpA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.90 81.0 7.02e-01 96.9% 77.4%
6b9sB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.90 77.0 7.32e-01 92.2% 80.8%
7zviA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.90 82.0 6.47e-01 98.4% 76.2%
7n1nB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.89 80.0 8.07e-01 95.3% 96.8%
2ofyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.89 78.0 7.55e-01 98.4% 85.7%
2ox6D00 1.10.3100.10 Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein 0.88 66.0 4.74e-01 85.9% 31.1%
2xcjA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.88 82.0 7.39e-01 100.0% 78.6%
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.88 75.0 7.20e-01 100.0% 81.7%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.88 77.0 7.62e-01 96.9% 90.9%
1x57A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.87 80.0 6.98e-01 100.0% 69.2%
4ybaA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.87 82.0 7.64e-01 100.0% 88.3%
2kpjA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.87 76.0 7.38e-01 96.9% 87.1%
3qf3D00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.87 79.0 6.22e-01 100.0% 59.4%
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.87 82.0 7.58e-01 100.0% 84.4%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.86 76.0 7.11e-01 96.9% 79.7%
2xi8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.86 76.0 7.54e-01 96.9% 92.4%
7xi5A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.86 64.0 7.08e-01 82.8% 98.0%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.85 75.0 6.91e-01 96.9% 76.5%
3cecA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.85 75.0 6.65e-01 96.9% 68.1%
6f8hC00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.85 74.0 6.52e-01 96.9% 67.7%
2ewtA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.85 75.0 7.26e-01 96.9% 88.7%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 72.0 7.38e-01 95.3% 98.3%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 72.0 6.78e-01 98.4% 78.7%
2qfcA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.84 76.0 4.85e-01 98.4% 22.2%
2awiA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 76.0 7.52e-01 98.4% 95.5%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 76.0 7.19e-01 98.4% 86.5%
2auwB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 65.0 6.36e-01 84.4% 75.7%
3fymA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 75.0 6.91e-01 98.4% 84.1%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 71.0 6.87e-01 98.4% 81.9%
4ghjB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.83 73.0 6.90e-01 98.4% 80.3%
2ppxA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.83 63.0 6.47e-01 84.4% 85.2%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 73.0 7.19e-01 98.4% 92.6%
1ic8A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 64.0 5.61e-01 84.4% 59.6%
1lliA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 73.0 6.49e-01 98.4% 76.4%
3fmyA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 60.0 5.99e-01 85.9% 77.3%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 71.0 6.73e-01 100.0% 88.2%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 61.0 6.12e-01 82.8% 83.1%
3mlfE00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 66.0 6.01e-01 92.2% 68.6%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 61.0 6.20e-01 84.4% 87.5%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 63.0 5.95e-01 89.1% 76.3%
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 68.0 6.22e-01 98.4% 84.5%
5d4z201 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 68.0 6.65e-01 100.0% 92.9%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 60.0 5.98e-01 84.4% 87.7%
3g7dA04 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 64.0 5.72e-01 96.9% 69.2%
1dw9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 60.0 5.48e-01 96.9% 70.1%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 42.0 4.83e-01 85.9% 85.1%
3r72A00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.64 48.0 3.97e-01 82.8% 82.0%
1neqA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 51.0 4.93e-01 98.4% 85.1%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 49.0 4.79e-01 100.0% 85.5%
1x2mA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 39.0 4.21e-01 78.1% 79.6%
2cdqA02 1.20.120.1320 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain 0.60 46.0 3.98e-01 82.8% 60.8%
1tqgA00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.59 45.0 3.85e-01 82.8% 55.2%
1g3nC01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.58 45.0 3.73e-01 85.9% 79.2%
5dicA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.58 44.0 3.81e-01 89.1% 90.4%
4gkfA00 1.10.520.30 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain 0.57 46.0 3.56e-01 89.1% 60.3%
8e9gE01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.56 39.0 3.98e-01 84.4% 74.6%
7ar7E01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.55 39.0 4.01e-01 75.0% 88.9%
1cxsA02 3.40.228.10 Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 0.54 46.0 3.17e-01 100.0% 58.5%
4mn0A00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.54 42.0 3.16e-01 89.1% 71.8%
4nxiA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 40.0 2.95e-01 96.9% 29.5%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.51 43.0 4.09e-01 96.9% 81.0%
3fd9A01 1.10.8.520 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › ExsD N-terminal domain-like 0.51 34.0 3.40e-01 82.8% 63.9%
4nc7A00 1.10.10.1250 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase, subunit delta, N-terminal domain 0.50 36.0 3.37e-01 84.4% 60.8%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4605318 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.96 88.0 8.22e-01 96.9% 81.3%
4010418 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.96 91.0 8.27e-01 98.4% 78.8%
3280943 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.96 87.0 8.68e-01 96.9% 93.8%
3972208 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.96 87.0 8.18e-01 96.9% 81.3%
None 0.96 78.0 8.04e-01 84.4% 90.0%
3941643 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.96 88.0 8.52e-01 98.4% 88.6%
3972189 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.95 87.0 8.12e-01 96.9% 81.3%
3977590 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.95 89.0 8.34e-01 98.4% 84.0%
3287571 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.95 84.0 7.44e-01 98.4% 69.4%
5003089 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.94 90.0 8.72e-01 100.0% 91.4%
3944738 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.94 87.0 8.14e-01 98.4% 82.7%
3285035 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.94 83.0 7.20e-01 95.3% 65.6%
3978391 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.94 86.0 8.32e-01 98.4% 88.6%
3277880 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.94 86.0 8.07e-01 96.9% 82.7%
3954613 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.94 89.0 6.86e-01 100.0% 57.6%
4038777 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.93 86.0 7.34e-01 100.0% 66.3%
3974678 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.93 84.0 8.43e-01 100.0% 95.4%
4380509 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.93 84.0 6.97e-01 98.4% 59.0%
3976255 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.92 84.0 7.92e-01 98.4% 82.7%
None 0.92 86.0 8.56e-01 100.0% 96.9%
3957550 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.92 87.0 8.40e-01 100.0% 91.4%
4984923 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.92 79.0 7.20e-01 95.3% 72.5%
4656409 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.92 83.0 8.04e-01 98.4% 88.6%
3953562 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.92 83.0 8.02e-01 96.9% 88.6%
4950501 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.92 80.0 7.98e-01 98.4% 90.8%
137778 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.92 84.0 8.27e-01 98.4% 94.0%
2581392 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.92 83.0 7.99e-01 98.4% 87.3%
3285836 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.91 84.0 7.74e-01 98.4% 87.5%
352428 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.91 83.0 7.29e-01 98.4% 69.7%
5059226 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.91 78.0 7.17e-01 95.3% 72.5%
148652 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.91 86.0 7.52e-01 100.0% 74.2%
4367316 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.91 83.0 6.62e-01 98.4% 53.9%
4952242 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.91 85.0 8.27e-01 100.0% 91.4%
4818340 101.1.1.9 alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.91 76.0 7.74e-01 93.8% 90.5%
3969553 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.91 83.0 7.79e-01 98.4% 82.7%
4008186 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.91 84.0 6.68e-01 100.0% 55.0%
4274007 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.91 82.0 7.55e-01 98.4% 77.5%
3277922 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.91 82.0 7.73e-01 96.9% 86.7%
3504520 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.91 85.0 7.13e-01 100.0% 64.0%
2149183 10.12.1.50 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HTH_26 0.90 82.0 5.48e-01 96.9% 28.8%
4507416 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.90 84.0 6.84e-01 100.0% 58.2%
3588760 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.90 83.0 6.85e-01 98.4% 60.0%
3283172 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.90 82.0 5.28e-01 98.4% 24.7%
3589821 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.89 82.0 7.95e-01 100.0% 91.4%
4956880 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.89 75.0 7.33e-01 95.3% 82.9%
3280189 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.89 80.0 7.52e-01 98.4% 82.7%
3954383 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.89 82.0 7.56e-01 100.0% 93.8%
5036222 101.1.4.16 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 0.89 77.0 7.70e-01 98.4% 90.8%
147355 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.89 84.0 7.84e-01 100.0% 85.5%
4509221 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.89 80.0 6.27e-01 98.4% 49.6%
3587838 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.89 80.0 7.72e-01 100.0% 88.6%
2149196 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.89 79.0 7.79e-01 96.9% 92.5%
2577290 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 82.0 7.49e-01 100.0% 91.4%
2773 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 82.0 7.68e-01 100.0% 83.1%
4536849 10.12.1.146 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HTH_3 0.88 81.0 4.83e-01 100.0% 44.9%
4033847 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 79.0 6.58e-01 98.4% 59.0%
5003294 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 81.0 7.66e-01 100.0% 85.3%
3956747 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 77.0 7.70e-01 96.9% 93.8%
3062945 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 76.0 7.32e-01 98.4% 83.1%
5031045 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 74.0 6.98e-01 95.3% 77.3%
3968645 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.88 81.0 6.44e-01 100.0% 53.3%
4860587 101.1.1.9 alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.88 81.0 7.50e-01 100.0% 94.9%
4537353 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 79.0 6.22e-01 100.0% 50.4%
3990067 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 79.0 7.27e-01 98.4% 78.8%
4568698 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 74.0 7.63e-01 96.9% 98.3%
2833991 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 77.0 7.69e-01 98.4% 95.4%
3591049 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 80.0 5.92e-01 100.0% 45.3%
3965549 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 80.0 7.53e-01 100.0% 89.3%
4947991 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.87 73.0 6.88e-01 95.3% 77.3%
4425759 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 79.0 6.52e-01 100.0% 59.1%
4032323 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 77.0 7.68e-01 98.4% 95.4%
3286370 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 79.0 6.24e-01 100.0% 55.2%
5083215 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.86 78.0 7.83e-01 100.0% 96.9%
4392992 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 82.0 7.46e-01 100.0% 83.7%
3989087 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 79.0 6.48e-01 100.0% 81.8%
3974079 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 79.0 6.58e-01 100.0% 62.9%
4380868 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 78.0 6.41e-01 100.0% 58.2%
169675 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.86 76.0 6.95e-01 100.0% 75.6%
5050179 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 69.0 7.14e-01 96.9% 93.3%
3951505 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 77.0 7.28e-01 100.0% 84.0%
3978875 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 77.0 6.30e-01 100.0% 60.9%
3985012 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 76.0 7.23e-01 100.0% 84.0%
3282671 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 75.0 7.17e-01 96.9% 87.7%
3506728 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 76.0 6.02e-01 100.0% 51.2%
5030212 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 76.0 7.35e-01 98.4% 90.0%
5050903 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.83 73.0 6.91e-01 96.9% 82.7%
4124125 101.1.4.27 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.83 72.0 5.94e-01 95.3% 71.8%
3987118 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 74.0 6.68e-01 98.4% 80.0%
4335698 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.82 72.0 6.39e-01 96.9% 68.9%
4034513 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 70.0 7.27e-01 93.8% 100.0%
1510513 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 73.0 6.11e-01 98.4% 58.9%
4952630 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.82 73.0 6.96e-01 100.0% 85.3%
3587893 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 74.0 6.32e-01 100.0% 64.0%
4632225 101.1.4.27 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.78 68.0 6.19e-01 96.9% 72.9%
4448496 101.1.4.27 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.78 66.0 6.42e-01 96.9% 87.1%
3180596 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.77 66.0 6.03e-01 96.9% 72.9%
4410932 101.1.4.27 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.76 64.0 6.31e-01 96.9% 87.1%
4455317 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.76 63.0 5.96e-01 96.9% 76.2%
4679747 101.1.4.27 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.75 62.0 5.81e-01 95.3% 75.0%
4216060 101.1.4.27 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.74 62.0 5.79e-01 95.3% 76.2%
D2 high residues 74-127
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gg7A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.83 59.0 3.71e-01 74.1% 90.5%
2kelA00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.82 63.0 6.79e-01 87.0% 97.8%
1u9pA00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.79 65.0 5.31e-01 88.9% 50.0%
2y1hB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.78 57.0 3.58e-01 77.8% 98.1%
2kilA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.76 53.0 3.60e-01 72.2% 21.5%
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 44.0 3.83e-01 72.2% 39.3%
3ucxA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 48.0 3.04e-01 72.2% 27.5%
4h15A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 47.0 3.02e-01 74.1% 28.7%
2xgvA00 1.10.375.10 Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein 0.64 44.0 3.33e-01 74.1% 69.9%
6o9aA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.62 42.0 3.06e-01 72.2% 24.5%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.59 38.0 2.96e-01 83.3% 34.0%
3ktwB00 3.30.56.30 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Signal recognition particle, SRP19-like subunit 0.57 38.0 3.22e-01 70.4% 76.3%
3khyA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 48.0 3.37e-01 100.0% 94.7%
7ymiD01 1.20.85.10 Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like 0.56 44.0 3.17e-01 90.7% 76.7%
1ed1A00 1.10.150.90 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 0.56 38.0 3.10e-01 75.9% 35.1%
4meaA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 43.0 2.72e-01 90.7% 63.9%
2d7eA01 3.40.1440.60 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain 0.55 43.0 3.76e-01 92.6% 82.2%
7ekdA01 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.54 46.0 2.90e-01 100.0% 54.7%
3pfsB00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 44.0 3.41e-01 94.4% 87.7%
2nscA01 3.30.70.1050 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain 0.53 43.0 3.91e-01 94.4% 93.6%
1w36C06 1.10.10.990 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.52 36.0 3.41e-01 75.9% 56.9%
4hjhA03 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.51 43.0 3.41e-01 96.3% 91.3%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4058428 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.98 66.0 6.61e-01 70.4% 69.1%
4928595 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.97 71.0 5.44e-01 75.9% 39.0%
4994233 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.94 71.0 6.09e-01 79.6% 55.0%
4375217 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.93 63.0 5.35e-01 77.8% 47.5%
5074942 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.90 68.0 5.98e-01 79.6% 57.3%
3941449 101.1.11.42 alpha arrays › HTH › HTH › Ribbon-helix-helix › ParD_like 0.90 70.0 6.28e-01 98.1% 62.9%
4632125 101.1.11.30 alpha arrays › HTH › HTH › Ribbon-helix-helix › FitA-like_RHH 0.88 66.0 5.92e-01 77.8% 61.4%
4937892 101.1.3.32 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › RHH_1 0.88 70.0 5.60e-01 90.7% 46.0%
4993165 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.88 66.0 5.36e-01 79.6% 64.2%
2771700 101.1.11.11 alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF1778 0.87 72.0 6.05e-01 92.6% 55.2%
3934937 873.1.1.5 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB 0.87 60.0 4.01e-01 72.2% 21.6%
3951746 101.1.11.2 alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 0.87 68.0 6.06e-01 85.2% 61.6%
4958205 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.87 62.0 6.48e-01 75.9% 82.0%
162036 101.1.11.28 alpha arrays › HTH › HTH › Ribbon-helix-helix › NikA-like 0.86 61.0 6.26e-01 74.1% 78.4%
3586991 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.85 63.0 5.55e-01 77.8% 56.0%
5050855 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.85 69.0 6.90e-01 92.6% 85.5%
3937183 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.83 63.0 4.49e-01 79.6% 40.7%
134182 2002.1.1.44 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase 0.83 59.0 3.72e-01 74.1% 91.3%
5064868 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.83 59.0 4.96e-01 75.9% 46.7%
5033202 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.81 66.0 5.53e-01 94.4% 53.3%
5012232 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.81 67.0 6.74e-01 90.7% 89.1%
4980865 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.80 58.0 5.11e-01 85.2% 52.5%
3551542 873.1.1.5 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB 0.78 53.0 3.56e-01 70.4% 20.0%
5001070 1076.1.1.1 alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like 0.77 54.0 3.39e-01 74.1% 45.8%
5011906 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.75 56.0 5.63e-01 88.9% 78.2%
4946062 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.75 58.0 5.98e-01 87.0% 90.0%
2625223 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.75 60.0 6.03e-01 90.7% 85.5%
3388953 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 50.0 4.38e-01 72.2% 47.5%
4288489 4973.1.1.2 alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaG_cat_HB 0.73 48.0 4.35e-01 72.2% 49.3%
3730715 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 48.0 4.79e-01 70.4% 67.3%
4978071 2002.1.1.16 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase 0.72 49.0 3.01e-01 72.2% 15.3%
3807164 101.1.11.3 alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP 0.70 55.0 5.53e-01 100.0% 85.5%
3959362 101.1.1.531 alpha arrays › HTH › HTH › Three-helical HTH › WS_DGAT_cat 0.68 56.0 4.00e-01 88.9% 39.3%
3005818 101.1.11.3 alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP 0.66 58.0 5.57e-01 98.1% 85.5%
3672400 10.12.1.17 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy,DIOX_N 0.64 46.0 2.77e-01 81.5% 10.8%
3463111 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.63 48.0 4.66e-01 81.5% 90.0%
4915831 6146.2.1.1 a+b two layers › Cas3 C-terminal domain › Cas3 subtype I-F/YPEST C-terminal domain › Cas3 subtype I-F/YPEST C-terminal domain › Cas3-like_C 0.61 47.0 4.17e-01 81.5% 75.3%
4246280 589.1.2.1 alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C 0.60 47.0 3.20e-01 87.0% 32.2%
3949796 589.1.2.0 alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) 0.58 49.0 3.08e-01 98.1% 40.0%
3220585 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.55 32.0 3.25e-01 92.6% 58.2%
1844315 210.1.6.1 a+b four layers › Ntn/PP2C › Ntn › Gamma-glutamyltranspeptidase-like › G_glu_transpept 0.54 41.0 2.63e-01 83.3% 46.2%