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MK448231.1__QBP28410.1__X__00066

Bact-Vir

MK448231.1__QBP28410.1__X__00066

Identity

Accession:
MK448231 ↗
Kingdom:
phage

Quality

86.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Klebsiella_phage_ST101-KPC2phi6.1

TaxID: 2555909

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-155
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.72 41.0 5.00e-01 77.8% 87.4%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 42.0 4.75e-01 97.0% 84.5%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.65 45.0 4.34e-01 99.3% 62.3%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.65 42.0 4.13e-01 97.8% 61.1%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.64 30.0 4.13e-01 72.6% 92.1%
2joxA00 2.60.40.4240 Mainly Beta › Sandwich › Immunoglobulin-like › Transcription activator, Churchill 0.61 34.0 3.80e-01 71.1% 68.9%
5ig0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 45.0 4.64e-01 77.0% 96.2%
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.59 41.0 3.84e-01 99.3% 56.5%
2rgqB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 46.0 4.70e-01 83.0% 97.7%
4ec6A00 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 43.0 4.76e-01 77.0% 95.4%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.58 39.0 3.93e-01 98.5% 66.9%
3ejvA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 45.0 4.29e-01 82.2% 98.7%
3holA03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.57 29.0 3.49e-01 87.4% 71.9%
3fsdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 42.0 4.48e-01 77.8% 99.2%
3ke7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 44.0 4.43e-01 80.7% 88.7%
3b7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 42.0 4.43e-01 77.0% 99.2%
7f13A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 44.0 4.34e-01 83.0% 88.9%
1tp6A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 41.0 4.30e-01 77.0% 99.2%
3ebtA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 44.0 4.47e-01 82.2% 96.9%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 47.0 3.79e-01 97.0% 96.2%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 41.0 4.47e-01 76.3% 97.3%
3grdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 43.0 4.37e-01 81.5% 97.0%
3kspA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 41.0 4.20e-01 77.8% 92.2%
3dmcA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 41.0 4.18e-01 78.5% 91.0%
3k0zA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 43.0 4.21e-01 83.7% 99.3%
3g0kA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 40.0 4.16e-01 77.8% 86.7%
3g8zA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 41.0 4.28e-01 80.7% 96.9%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.54 44.0 4.65e-01 95.6% 96.7%
1fuwA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 35.0 4.09e-01 77.8% 96.7%
3ec9A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 42.0 4.32e-01 82.2% 96.9%
1tuhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 42.0 4.26e-01 82.2% 95.4%
2bngC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 41.0 4.12e-01 81.5% 83.6%
4u13A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 39.0 4.28e-01 75.6% 98.2%
3f40A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 40.0 4.39e-01 81.5% 97.3%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 41.0 4.36e-01 82.2% 99.2%
4h3uA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 43.0 4.40e-01 86.7% 96.2%
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.52 38.0 3.71e-01 74.1% 92.5%
1buqA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 40.0 4.14e-01 78.5% 93.6%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 38.0 3.68e-01 79.3% 68.2%
5ce6A02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.52 36.0 2.98e-01 71.9% 87.8%
1c7hA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 39.0 4.15e-01 80.0% 96.7%
2k54A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 38.0 4.01e-01 77.8% 91.1%
5cxoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 39.0 3.94e-01 80.7% 91.0%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3377988 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.74 46.0 5.25e-01 77.8% 84.0%
3825682 243.3.1.1 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin 0.72 45.0 5.18e-01 77.8% 84.8%
3243080 243.5.1.0 ↗ a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.71 44.0 4.99e-01 94.1% 83.0%
3824321 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.70 42.0 5.05e-01 74.8% 88.9%
3435849 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.70 43.0 5.28e-01 91.9% 95.5%
3429751 708.1.1.2 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › WRKY 0.68 30.0 4.41e-01 71.9% 93.3%
3303563 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.66 45.0 4.30e-01 99.3% 59.4%
4987012 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.66 43.0 4.16e-01 97.8% 58.7%
3820010 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.65 45.0 4.27e-01 99.3% 59.4%
3959925 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.65 43.0 4.92e-01 97.8% 90.0%
4982195 331.9.1.0 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.65 36.0 3.68e-01 80.7% 54.6%
4984586 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.65 34.0 3.79e-01 80.0% 61.8%
7051 881.1.1.4 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DcrB 0.65 42.0 4.13e-01 97.8% 61.1%
4953273 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.64 40.0 4.00e-01 99.3% 60.0%
4977909 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.64 36.0 3.99e-01 84.4% 67.3%
4204465 881.1.1.36 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF25844 0.64 40.0 4.07e-01 99.3% 63.0%
5047928 331.9.1.0 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.63 37.0 3.90e-01 80.7% 63.3%
3273247 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.63 42.0 4.11e-01 97.8% 60.7%
3962603 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.63 42.0 4.60e-01 99.3% 82.7%
4968514 331.9.1.0 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.63 34.0 3.50e-01 79.3% 54.4%
3966459 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.63 41.0 4.14e-01 97.8% 64.3%
4941591 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.63 41.0 4.04e-01 97.8% 60.7%
5034702 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.63 41.0 3.99e-01 98.5% 59.7%
5029047 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.62 41.0 3.99e-01 97.8% 59.3%
5047424 331.9.1.0 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.62 36.0 3.82e-01 80.0% 64.2%
5047426 331.9.1.0 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.61 36.0 3.88e-01 80.0% 67.0%
3959606 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.61 42.0 3.92e-01 99.3% 56.2%
3668642 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.60 48.0 5.22e-01 96.3% 100.0%
3489236 243.1.1.12 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.60 45.0 4.98e-01 93.3% 99.0%
3803981 243.1.1.25 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.60 45.0 4.44e-01 77.8% 82.8%
4974776 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.60 39.0 3.87e-01 97.0% 60.7%
3624756 243.1.1.12 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.60 44.0 4.93e-01 95.6% 99.0%
5058112 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.60 41.0 3.99e-01 98.5% 62.8%
4941093 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.60 39.0 3.78e-01 99.3% 58.7%
4953666 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.60 39.0 3.82e-01 97.8% 60.0%
3924297 243.1.1.12 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.60 42.0 4.78e-01 91.1% 98.0%
3805100 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.60 43.0 3.84e-01 99.3% 53.2%
3430924 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.60 45.0 4.21e-01 77.8% 76.9%
3674547 243.1.1.25 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.59 44.0 4.31e-01 77.8% 82.0%
4954283 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.59 38.0 3.65e-01 99.3% 56.0%
5044863 331.9.1.0 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.59 35.0 3.55e-01 80.0% 59.2%
3241172 243.1.1.2 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.59 44.0 4.73e-01 77.0% 98.3%
4974736 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.59 38.0 3.78e-01 97.0% 60.7%
3989344 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.58 44.0 4.58e-01 77.8% 90.4%
2410020 881.1.1.4 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DcrB 0.58 39.0 3.80e-01 98.5% 61.5%
1413889 274.1.1.5 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor 0.58 34.0 4.10e-01 71.1% 86.8%
2883156 243.1.1.17 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TpcC 0.58 42.0 4.43e-01 100.0% 82.9%
3508903 243.1.1.12 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.58 43.0 4.78e-01 92.6% 100.0%
3712361 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.58 43.0 4.33e-01 78.5% 90.7%
3251351 243.1.1.2 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.57 44.0 4.69e-01 80.0% 100.0%
3234838 243.1.1.28 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.57 43.0 4.56e-01 77.8% 99.2%
2724186 243.1.1.67 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Cds6_C 0.57 43.0 4.53e-01 77.8% 92.5%
3287916 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.57 43.0 4.45e-01 79.3% 95.4%
3280926 881.1.1.6 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Lpp-LpqN 0.57 40.0 3.68e-01 99.3% 55.7%
376518 243.1.1.25 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.56 44.0 4.43e-01 80.7% 88.7%
3688336 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.56 44.0 4.35e-01 83.0% 87.6%
5022181 9.3.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.56 41.0 4.35e-01 94.8% 86.4%
3181774 12.3.1.6 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.55 49.0 3.69e-01 97.0% 91.5%
3229281 243.1.1.75 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.55 41.0 4.30e-01 77.0% 97.5%
4948119 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.55 43.0 4.52e-01 94.1% 90.8%
1887056 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.54 42.0 4.44e-01 92.6% 90.8%
4008006 12.3.1.6 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.53 47.0 3.62e-01 98.5% 94.4%
3816855 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 36.0 3.72e-01 80.7% 72.8%
4597964 881.5.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Respiratory growth induced protein 1 › Respiratory growth induced protein 1 0.53 38.0 3.69e-01 73.3% 88.7%
4955671 7089.1.1.0 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.53 32.0 3.95e-01 84.4% 100.0%
3167349 881.5.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Respiratory growth induced protein 1 › Respiratory growth induced protein 1 › RGI1 0.53 38.0 3.69e-01 73.3% 88.7%
3966884 243.1.1.28 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.53 43.0 4.38e-01 85.9% 100.0%
2617498 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.52 40.0 4.40e-01 94.8% 99.1%
4974235 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.52 38.0 3.54e-01 99.3% 61.2%
3989339 12.3.1.14 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Hepar_II_III 0.52 46.0 3.66e-01 97.8% 92.4%
3826602 243.1.1.25 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.51 44.0 4.36e-01 90.4% 91.4%
4977218 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.50 42.0 3.13e-01 90.4% 65.8%