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MK448340.1__QBX07597.1__JavanS156_0023__00023
Bact-VirMK448340.1__QBX07597.1__JavanS156_0023__00023
Identity
- Accession:
- MK448340 ↗
- Kingdom:
- phage
Quality
88.7
mean pLDDT
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-68
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ceiA03 | 6.10.250.2380 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.57 | 48.0 | 4.15e-01 | 97.1% | 94.6% |
| 1pujA02 | 1.10.1580.10 | Mainly Alpha › Orthogonal Bundle › Conserved Hypothetical Protein Ylqf; Chain: A; domain 2 › | 0.53 | 30.0 | 2.79e-01 | 95.6% | 38.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3687239 | 109.4.1.563 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF3437 | 0.58 | 41.0 | 2.94e-01 | 76.5% | 45.4% |
| 3200960 | 5069.1.3.5 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › DUF2418 | 0.57 | 50.0 | 3.44e-01 | 100.0% | 30.2% |
| 4469842 | 1079.1.1.0 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA | 0.56 | 48.0 | 3.43e-01 | 100.0% | 57.8% |
| 3693567 | 5041.1.1.0 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C | 0.54 | 35.0 | 3.20e-01 | 82.4% | 51.1% |
| 4029018 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 37.0 | 2.22e-01 | 72.1% | 13.0% |
| 3597295 | 3003.1.1.0 ↗ | a+b complex topology › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | 0.54 | 43.0 | 3.48e-01 | 89.7% | 97.0% |
| 3595409 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.53 | 44.0 | 3.35e-01 | 100.0% | 37.6% |
| 3204938 | 101.1.1.228 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Eaf7 | 0.53 | 35.0 | 3.23e-01 | 100.0% | 52.2% |
| 3782602 | 4177.1.1.27 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_4 | 0.52 | 45.0 | 2.95e-01 | 100.0% | 27.2% |
| 3605494 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.52 | 46.0 | 3.87e-01 | 100.0% | 61.7% |
| 3711632 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.51 | 45.0 | 3.98e-01 | 100.0% | 94.0% |
| 3192264 | 7076.1.1.0 ↗ | 0.50 | 44.0 | 3.93e-01 | 100.0% | 72.0% | |
| 4982996 | 218.2.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 | 0.50 | 46.0 | 3.47e-01 | 98.5% | 64.0% |
D2
medium
residues 69-128
Domain cluster:
rep: KX227758.1__ANT40227.1__X__00020__D76-127