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MK448386.1__QBX08383.1__JavanS256_0011__00011

Bact-Vir

MK448386.1__QBX08383.1__JavanS256_0011__00011

Identity

Accession:
MK448386 ↗
Kingdom:
phage

Quality

93.5 mean pLDDT

Taxonomy

TaxID: 2558593

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-73
PDB
CATH (97)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.82 74.0 5.50e-01 98.6% 41.9%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.82 74.0 6.70e-01 98.6% 77.7%
2mq8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.81 73.0 6.29e-01 100.0% 74.1%
2bvfA03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.79 68.0 4.78e-01 93.1% 35.2%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.79 71.0 5.99e-01 100.0% 78.0%
3pm9A04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.78 70.0 6.55e-01 98.6% 92.0%
1yz7A02 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.78 70.0 6.51e-01 100.0% 86.7%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.78 66.0 6.45e-01 98.6% 86.1%
1r89A03 3.30.70.590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain 0.77 70.0 5.65e-01 100.0% 68.7%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.77 62.0 6.22e-01 98.6% 86.5%
2k3iA01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.77 64.0 6.13e-01 93.1% 89.4%
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.77 68.0 6.45e-01 98.6% 84.7%
1f08B00 3.40.1310.10 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.76 65.0 5.12e-01 94.4% 46.2%
1p1lA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.76 69.0 6.10e-01 98.6% 73.5%
2khdA00 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.76 65.0 5.65e-01 94.4% 66.7%
3o6qA02 3.30.70.2720 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.76 62.0 5.24e-01 87.5% 93.0%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.76 65.0 6.21e-01 98.6% 81.2%
4mt1A02 3.30.70.1430 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.75 68.0 6.02e-01 100.0% 76.7%
2x3gA00 3.30.70.1910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.75 65.0 5.56e-01 98.6% 60.3%
3d3bJ00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.74 67.0 6.26e-01 98.6% 81.6%
2a6mA00 3.30.70.1290 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like 0.74 66.0 5.46e-01 100.0% 60.0%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.74 67.0 5.26e-01 100.0% 96.6%
4u9rA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 67.0 6.44e-01 100.0% 98.8%
3eoqB02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.74 64.0 4.85e-01 100.0% 49.7%
3p96A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.74 64.0 6.15e-01 98.6% 85.7%
2rhqB06 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.73 64.0 6.14e-01 98.6% 97.6%
3m05B01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 63.0 5.79e-01 100.0% 73.9%
3ce8A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 65.0 6.05e-01 100.0% 79.8%
5d79A03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.73 64.0 4.73e-01 98.6% 52.9%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.72 62.0 5.96e-01 95.8% 85.2%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.72 61.0 6.01e-01 98.6% 87.3%
6gdxA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 64.0 5.61e-01 98.6% 71.0%
2lu1A00 3.30.70.2370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 62.0 5.88e-01 100.0% 98.9%
6v04A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.72 63.0 5.25e-01 98.6% 100.0%
2fyxA00 3.30.70.1290 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like 0.71 63.0 5.20e-01 100.0% 62.3%
2nrqA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.71 62.0 5.02e-01 97.2% 73.7%
1m55A00 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.71 61.0 4.58e-01 100.0% 62.7%
5l6gA02 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.71 62.0 4.37e-01 98.6% 44.1%
5t0oA02 3.30.70.1430 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.71 63.0 5.64e-01 100.0% 78.6%
1ygyA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.71 58.0 5.72e-01 97.2% 86.8%
2jgbA01 3.30.760.10 Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e 0.71 62.0 4.71e-01 98.6% 45.1%
1r9wA00 3.40.1310.10 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.71 59.0 4.78e-01 94.4% 48.6%
2kjwA00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.71 61.0 5.60e-01 98.6% 76.0%
2l9pA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.70 62.0 4.80e-01 100.0% 88.4%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.70 63.0 5.12e-01 100.0% 99.3%
1lq9A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 61.0 5.31e-01 98.6% 75.0%
2ldkA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.70 62.0 4.68e-01 100.0% 89.0%
2r7rA04 3.30.70.2480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 61.0 4.79e-01 100.0% 48.4%
5t3eB02 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.69 60.0 4.21e-01 100.0% 82.3%
2cg8B02 3.30.70.560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK 0.69 60.0 4.99e-01 100.0% 56.8%
2wdoA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.69 49.0 4.12e-01 75.0% 99.2%
3go9A02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.69 60.0 4.32e-01 100.0% 77.4%
3e8oB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 60.0 5.44e-01 100.0% 80.0%
1x60A01 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.68 55.0 5.56e-01 86.1% 88.9%
1vqzA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.68 59.0 4.13e-01 98.6% 55.0%
2gffA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 58.0 5.35e-01 97.2% 84.4%
2e5aA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.68 58.0 4.14e-01 100.0% 51.3%
6wcsA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.68 59.0 4.30e-01 100.0% 70.3%
3i3wA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.68 57.0 5.60e-01 97.2% 100.0%
1j4wA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.68 59.0 5.87e-01 100.0% 97.3%
1j6wA00 3.30.1360.80 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) 0.67 58.0 4.52e-01 98.6% 70.2%
1we8A01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.67 58.0 5.57e-01 100.0% 91.7%
1zr6A03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.67 58.0 4.25e-01 98.6% 35.5%
4xeaA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.67 57.0 4.07e-01 98.6% 68.4%
2ipiA02 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.67 56.0 4.00e-01 98.6% 35.1%
1xkpB00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.67 56.0 4.77e-01 94.4% 63.6%
4wxaA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.67 58.0 5.57e-01 100.0% 88.1%
4oi3A00 3.30.70.3090 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ORF SCO4226, nickel-binding ferredoxin-like monomer 0.67 56.0 5.38e-01 93.1% 86.4%
3b82A06 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 52.0 4.49e-01 97.2% 52.9%
2p0lA00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.66 58.0 3.93e-01 98.6% 55.3%
1khmA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.66 56.0 5.34e-01 100.0% 82.0%
2op5B01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 56.0 5.10e-01 98.6% 85.0%
1jw3A00 3.55.10.10 Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain 0.66 47.0 3.84e-01 76.4% 41.4%
2axyA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.66 56.0 5.65e-01 100.0% 97.2%
2ctfA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.65 56.0 5.08e-01 100.0% 69.6%
3gwbA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.65 55.0 4.04e-01 98.6% 73.2%
2onlC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 46.0 4.40e-01 79.2% 62.8%
2l8oA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.65 57.0 4.60e-01 100.0% 91.7%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.65 56.0 4.67e-01 100.0% 97.7%
2f7lA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.65 54.0 5.19e-01 97.2% 100.0%
1i72A00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.64 56.0 3.88e-01 98.6% 49.8%
2anrA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.64 55.0 5.50e-01 100.0% 96.0%
6n2nA01 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.64 57.0 4.25e-01 98.6% 94.9%
2raaA00 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.64 57.0 4.27e-01 100.0% 92.7%
4pvkA03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.64 53.0 4.02e-01 93.1% 39.0%
2bkyX00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.64 45.0 4.33e-01 76.4% 69.8%
3c0tA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.62 52.0 3.88e-01 97.2% 96.0%
1js3A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 54.0 4.98e-01 100.0% 100.0%
1tuwA00 3.30.70.1090 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. 0.62 53.0 4.75e-01 100.0% 76.4%
4tpvA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.61 45.0 3.44e-01 80.6% 44.0%
2jzxA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.61 52.0 5.09e-01 100.0% 92.4%
3kp0A03 3.30.30.60 Alpha Beta › 2-Layer Sandwich › Defensin A-like › D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain 0.60 43.0 4.46e-01 77.8% 85.1%
3r7wB02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.60 43.0 3.77e-01 79.2% 99.2%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.59 49.0 4.13e-01 97.2% 61.2%
5zspA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 48.0 4.02e-01 95.8% 88.4%
1zhsA01 3.30.1490.230 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.51 36.0 3.90e-01 77.8% 100.0%
3cvgA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 41.0 3.42e-01 97.2% 91.7%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2777205 304.159.1.1 a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB › Lant_dehydr_C 0.83 76.0 6.93e-01 100.0% 81.7%
3971355 304.12.1.2 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C 0.80 71.0 6.72e-01 98.6% 88.2%
4502232 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.80 70.0 6.82e-01 97.2% 95.0%
4945658 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.79 72.0 6.83e-01 100.0% 89.2%
3613200 304.134.1.0 a+b two layers › Alpha-beta plaits › MJ1480-like › MJ1480-like 0.79 70.0 6.52e-01 98.6% 88.9%
4946181 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.78 71.0 5.92e-01 100.0% 66.7%
3936869 304.8.1.72 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › SCVP 0.77 67.0 6.06e-01 97.2% 81.8%
3945401 304.12.1.2 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C 0.77 68.0 6.49e-01 98.6% 87.1%
3438815 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.77 69.0 6.53e-01 98.6% 83.5%
5041991 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.77 69.0 6.40e-01 100.0% 87.8%
4929473 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.76 68.0 6.43e-01 98.6% 90.6%
4959193 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.76 68.0 6.44e-01 100.0% 95.3%
5029644 304.39.1.1 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.76 68.0 5.99e-01 100.0% 80.0%
3357746 304.12.1.8 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › bHLH-TF_ACT-like_plant 0.76 67.0 6.77e-01 100.0% 100.0%
3317095 304.9.1.122 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › bHLH-TF_ACT-like_plant 0.76 65.0 6.60e-01 94.4% 97.1%
184732 3313.1.1.1 a+b two layers › Uncharacterized protein VC_A0919 › Uncharacterized protein VC_A0919 › Uncharacterized protein VC_A0919 › DUF406 0.76 65.0 5.65e-01 94.4% 66.7%
4971598 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.76 68.0 6.77e-01 100.0% 98.7%
3284477 304.12.1.2 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C 0.76 67.0 6.37e-01 100.0% 88.2%
5065478 304.19.1.1 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha 0.76 67.0 6.33e-01 100.0% 87.5%
5055962 304.39.1.1 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.76 67.0 5.67e-01 100.0% 82.5%
5052894 304.19.1.1 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha 0.75 68.0 6.21e-01 100.0% 83.9%
5027876 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.75 68.0 6.55e-01 100.0% 93.8%
4980122 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.75 65.0 5.58e-01 100.0% 67.5%
4988647 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.75 67.0 6.64e-01 100.0% 97.3%
4983119 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.74 67.0 6.28e-01 100.0% 85.4%
3325750 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.74 65.0 6.36e-01 100.0% 88.7%
5031564 304.19.1.1 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha 0.74 67.0 6.12e-01 100.0% 82.8%
4985071 304.19.1.1 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha 0.74 66.0 5.98e-01 100.0% 76.8%
4983053 304.19.1.1 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha 0.74 66.0 6.24e-01 100.0% 90.6%
3286580 304.159.1.1 a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB › Lant_dehydr_C 0.74 64.0 5.83e-01 100.0% 80.0%
4344773 304.162.1.0 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.73 63.0 6.46e-01 100.0% 98.6%
3967172 309.1.1.11 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › PqqF-like_C_4 0.73 63.0 4.73e-01 98.6% 82.7%
3348806 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.73 64.0 6.35e-01 98.6% 98.7%
4943788 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.73 65.0 6.28e-01 100.0% 93.8%
3955512 305.1.1.0 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.73 64.0 5.39e-01 98.6% 64.2%
5019384 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.73 63.0 5.80e-01 98.6% 85.3%
3231349 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.73 65.0 6.03e-01 100.0% 81.1%
3271101 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.73 65.0 6.29e-01 100.0% 93.8%
3319316 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.72 64.0 6.35e-01 98.6% 100.0%
3215882 304.8.1.72 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › SCVP 0.72 65.0 6.02e-01 100.0% 84.4%
5073850 304.43.1.6 a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 › FLAD1_M 0.72 62.0 6.17e-01 95.8% 98.7%
5039525 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.72 63.0 5.87e-01 97.2% 87.8%
4929428 304.162.1.0 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.72 62.0 5.96e-01 98.6% 97.6%
3724442 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.72 62.0 6.26e-01 97.2% 98.6%
3280378 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.72 64.0 4.91e-01 100.0% 51.5%
3511024 304.28.1.1 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran 0.72 65.0 5.80e-01 100.0% 81.0%
3448748 304.27.1.2 a+b two layers › Alpha-beta plaits › Formiminotransferase domain of formiminotransferase-cyclodeaminase. › Formiminotransferase domain of formiminotransferase-cyclodeaminase. › FTCD_N 0.72 63.0 5.00e-01 100.0% 50.7%
3781532 327.11.2.35 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF29984 0.72 62.0 4.95e-01 97.2% 51.7%
5005033 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.71 62.0 6.04e-01 98.6% 97.5%
3865044 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.71 63.0 5.91e-01 100.0% 83.0%
4153241 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.71 56.0 4.96e-01 84.7% 65.7%
4927268 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.71 63.0 6.14e-01 100.0% 95.0%
4176189 304.52.1.1 a+b two layers › Alpha-beta plaits › YbeD/HP0495-like › YbeD/HP0495-like › DUF493 0.71 62.0 5.91e-01 98.6% 84.7%
3313948 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.71 63.0 6.12e-01 100.0% 96.2%
3493241 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.71 63.0 4.76e-01 100.0% 96.6%
4998201 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.71 61.0 5.88e-01 100.0% 89.4%
3580185 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.71 62.0 5.82e-01 100.0% 81.1%
3488179 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.70 62.0 5.82e-01 100.0% 90.0%
5035279 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.70 62.0 5.90e-01 100.0% 83.5%
4854408 309.1.1.0 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase 0.70 61.0 5.21e-01 100.0% 69.2%
3755164 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.70 61.0 6.09e-01 100.0% 94.7%
4553885 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.70 63.0 6.08e-01 100.0% 91.3%
5072239 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.70 62.0 5.80e-01 100.0% 82.2%
5032609 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.70 62.0 6.12e-01 100.0% 98.7%
3521725 327.11.2.55 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF26774 0.70 61.0 5.85e-01 98.6% 84.7%
3552384 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.70 61.0 5.77e-01 100.0% 83.0%
2834102 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.70 60.0 5.75e-01 100.0% 93.0%
4974589 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.70 59.0 5.66e-01 95.8% 84.5%
5000786 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.70 61.0 5.97e-01 100.0% 93.8%
5017294 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.70 59.0 5.88e-01 97.2% 97.3%
3389472 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.70 60.0 5.90e-01 100.0% 91.3%
4316605 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.70 59.0 4.05e-01 98.6% 26.5%
5072410 306.6.1.6 a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › GH3_C 0.70 61.0 5.71e-01 98.6% 93.3%
3329735 327.11.2.37 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DEAH11_1st 0.69 60.0 6.06e-01 98.6% 100.0%
5030527 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.69 61.0 5.92e-01 100.0% 92.5%
3436180 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 59.0 6.04e-01 94.4% 100.0%
4975956 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.69 60.0 5.78e-01 100.0% 91.8%
4515869 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.69 59.0 5.59e-01 100.0% 87.6%
1513105 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.69 61.0 5.85e-01 100.0% 90.2%
4935008 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.68 59.0 5.78e-01 100.0% 95.0%
3369184 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.68 56.0 5.46e-01 93.1% 82.5%
4991988 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.68 57.0 5.81e-01 100.0% 100.0%
4048493 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.68 58.0 5.68e-01 100.0% 93.8%
5031719 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.67 58.0 5.66e-01 97.2% 90.0%
3778029 327.11.2.18 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › DTX3L_KH-like 0.67 59.0 5.72e-01 100.0% 92.5%
3460420 304.51.1.0 a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related 0.67 58.0 5.19e-01 98.6% 85.7%
5047612 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.67 58.0 5.73e-01 100.0% 98.7%
4971652 2004.1.3.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.67 59.0 4.24e-01 97.2% 91.5%
3877940 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.66 56.0 5.67e-01 94.4% 100.0%
5053918 256.1.1.1 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease 0.66 46.0 4.91e-01 75.0% 88.3%
4019036 304.3.1.15 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › PF31052 0.65 51.0 5.22e-01 100.0% 91.4%
4558948 256.1.1.0 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like 0.64 45.0 4.81e-01 75.0% 88.3%
5029360 256.1.1.1 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease 0.63 44.0 4.64e-01 76.4% 83.1%
5045407 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.63 52.0 4.40e-01 95.8% 62.3%
4979756 241.1.1.6 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN 0.63 54.0 4.45e-01 98.6% 62.2%
4931425 304.57.1.1 a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 0.61 52.0 4.62e-01 98.6% 74.5%
4329174 223.1.1.7 a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.59 44.0 3.40e-01 80.6% 100.0%
3224621 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.59 49.0 4.88e-01 93.1% 93.3%
4337990 387.1.5.0 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.57 43.0 4.35e-01 81.9% 94.3%