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MK448418.1__QBX08987.1__JavanS305_0004__00004
Bact-VirMK448418.1__QBX08987.1__JavanS305_0004__00004
Identity
- Accession:
- MK448418 ↗
- Kingdom:
- phage
Quality
72.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 130-233
Domain cluster:
rep: OQ999172.1__WJZ23544.1__LIS04_116__00116__D6-94
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ixrA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.84 | 51.0 | 6.38e-01 | 81.7% | 100.0% |
| 1lm0A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 66.0 | 6.76e-01 | 100.0% | 93.1% |
| 1bvsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 48.0 | 5.88e-01 | 78.8% | 98.5% |
| 4joiC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 63.0 | 6.06e-01 | 100.0% | 75.4% |
| 1wydA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 62.0 | 6.33e-01 | 99.0% | 90.2% |
| 2kctA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 52.0 | 5.65e-01 | 81.7% | 87.4% |
| 2pi2D00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 62.0 | 5.84e-01 | 100.0% | 75.6% |
| 5zg8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 62.0 | 6.33e-01 | 100.0% | 92.2% |
| 2dgyA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 45.0 | 5.15e-01 | 100.0% | 83.5% |
| 3k7uC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 56.0 | 5.79e-01 | 81.7% | 93.9% |
| 1l0wA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 63.0 | 6.26e-01 | 100.0% | 91.5% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 57.0 | 6.10e-01 | 100.0% | 96.7% |
| 3go5A01 | 2.40.50.330 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 43.0 | 5.07e-01 | 85.6% | 88.7% |
| 3kf8A00 | 2.40.50.1040 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 66.0 | 5.18e-01 | 100.0% | 63.8% |
| 4me3A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 61.0 | 6.32e-01 | 99.0% | 97.9% |
| 5gqoA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 54.0 | 5.61e-01 | 81.7% | 85.6% |
| 1an8A02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 49.0 | 5.61e-01 | 81.7% | 98.7% |
| 6aqgA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 65.0 | 5.79e-01 | 100.0% | 73.0% |
| 6l4qB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 65.0 | 5.91e-01 | 100.0% | 78.5% |
| 1o7iB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 59.0 | 5.74e-01 | 100.0% | 83.3% |
| 4up7A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 65.0 | 5.63e-01 | 100.0% | 68.4% |
| 4glaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 54.0 | 5.78e-01 | 82.7% | 94.4% |
| 3nemA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 60.0 | 6.06e-01 | 100.0% | 92.4% |
| 6nrzA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 65.0 | 5.58e-01 | 100.0% | 75.5% |
| 4zpjA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 39.0 | 3.30e-01 | 100.0% | 33.3% |
| 1a62A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 46.0 | 5.41e-01 | 78.8% | 100.0% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 54.0 | 5.34e-01 | 82.7% | 87.4% |
| 3zjyC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 42.0 | 4.89e-01 | 99.0% | 86.5% |
| 4pofA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 62.0 | 6.25e-01 | 99.0% | 97.1% |
| 2vl6A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 63.0 | 6.14e-01 | 99.0% | 99.1% |
| 1fguB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 61.0 | 5.79e-01 | 100.0% | 81.5% |
| 1wjjA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 53.0 | 5.26e-01 | 83.7% | 85.5% |
| 1bbuA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 63.0 | 5.64e-01 | 100.0% | 74.3% |
| 1ty0A02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.68 | 46.0 | 5.27e-01 | 80.8% | 97.3% |
| 3ebeB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 60.0 | 5.08e-01 | 100.0% | 60.2% |
| 2ahoB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 48.0 | 5.33e-01 | 95.2% | 96.2% |
| 2k50A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 58.0 | 5.86e-01 | 99.0% | 93.3% |
| 1uwvA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 37.0 | 4.26e-01 | 78.8% | 75.3% |
| 1xjvA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 57.0 | 5.10e-01 | 100.0% | 67.6% |
| 2nttA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 43.0 | 4.99e-01 | 100.0% | 97.1% |
| 3rd4B00 | 2.40.50.660 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 48.0 | 5.34e-01 | 81.7% | 96.3% |
| 6jy5B00 | 2.40.50.220 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml | 0.65 | 45.0 | 5.05e-01 | 77.9% | 91.5% |
| 8c5yA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 60.0 | 5.03e-01 | 100.0% | 90.0% |
| 1eu3A02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 45.0 | 5.06e-01 | 80.8% | 97.5% |
| 2iciA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 44.0 | 4.92e-01 | 100.0% | 97.4% |
| 1jt8A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 39.0 | 4.00e-01 | 81.7% | 64.7% |
| 3ntkB01 | 2.40.50.790 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 43.0 | 4.70e-01 | 100.0% | 87.2% |
| 3qr8A01 | 2.40.50.230 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain | 0.61 | 43.0 | 4.74e-01 | 90.4% | 90.5% |
| 3o2zF00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 42.0 | 4.75e-01 | 78.8% | 96.1% |
| 1enfA01 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 43.0 | 4.79e-01 | 80.8% | 98.7% |
| 1fnuA01 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 42.0 | 4.68e-01 | 83.7% | 98.8% |
| 2c35B02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 44.0 | 4.69e-01 | 80.8% | 98.9% |
| 3mc0B02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 40.0 | 4.34e-01 | 77.9% | 91.7% |
| 1gd7A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 45.0 | 4.51e-01 | 100.0% | 84.4% |
| 5jpnC02 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 47.0 | 4.11e-01 | 100.0% | 61.1% |
| 2juoA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 39.0 | 4.20e-01 | 82.7% | 92.1% |
| 1ae2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 39.0 | 4.21e-01 | 98.1% | 98.8% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4096999 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.87 | 53.0 | 6.71e-01 | 82.7% | 100.0% |
| 4976501 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.84 | 62.0 | 6.83e-01 | 100.0% | 94.1% |
| 4407567 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.84 | 52.0 | 6.44e-01 | 79.8% | 100.0% |
| 4937552 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.82 | 61.0 | 6.12e-01 | 100.0% | 76.0% |
| 3386993 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.81 | 50.0 | 6.28e-01 | 82.7% | 100.0% |
| 4978268 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 59.0 | 6.17e-01 | 100.0% | 82.1% |
| 4309225 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.81 | 50.0 | 6.24e-01 | 79.8% | 100.0% |
| 5027798 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.81 | 62.0 | 6.86e-01 | 100.0% | 100.0% |
| 4936449 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 53.0 | 6.38e-01 | 80.8% | 100.0% |
| 5051423 | 2.1.1.67 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 | 0.80 | 60.0 | 5.98e-01 | 100.0% | 76.2% |
| 4990934 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.80 | 69.0 | 6.26e-01 | 100.0% | 70.4% |
| 5003679 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.80 | 65.0 | 6.95e-01 | 100.0% | 98.9% |
| 5071102 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 54.0 | 5.56e-01 | 100.0% | 73.0% |
| 4950974 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 63.0 | 6.37e-01 | 100.0% | 83.8% |
| 4017978 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 66.0 | 6.18e-01 | 100.0% | 74.4% |
| 5059431 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.78 | 60.0 | 6.62e-01 | 99.0% | 100.0% |
| 3276705 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.78 | 65.0 | 6.68e-01 | 99.0% | 93.0% |
| 3935866 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 63.0 | 6.36e-01 | 100.0% | 85.7% |
| 5038519 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.77 | 63.0 | 6.09e-01 | 100.0% | 78.3% |
| 5021135 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.77 | 63.0 | 6.71e-01 | 99.0% | 100.0% |
| 5079140 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 57.0 | 5.79e-01 | 100.0% | 78.6% |
| 3216323 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.77 | 54.0 | 5.90e-01 | 80.8% | 88.2% |
| 4956738 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 54.0 | 5.67e-01 | 100.0% | 80.0% |
| 3208295 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.75 | 71.0 | 6.50e-01 | 100.0% | 85.4% |
| 3172086 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.75 | 64.0 | 6.20e-01 | 100.0% | 81.7% |
| 4373832 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 65.0 | 6.48e-01 | 100.0% | 91.4% |
| 3619157 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.75 | 61.0 | 6.17e-01 | 100.0% | 86.7% |
| 4420993 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 56.0 | 5.45e-01 | 100.0% | 71.3% |
| 3995469 | 2.18.1.3 ↗ | beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins › OB_DEPS-1_2nd | 0.74 | 48.0 | 5.31e-01 | 81.7% | 81.2% |
| 4970159 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 62.0 | 6.47e-01 | 96.2% | 97.9% |
| 3704585 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 60.0 | 5.76e-01 | 100.0% | 76.5% |
| 170219 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.74 | 52.0 | 5.70e-01 | 81.7% | 89.4% |
| 5015768 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 62.0 | 6.38e-01 | 99.0% | 95.0% |
| 4064995 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.73 | 64.0 | 5.84e-01 | 100.0% | 72.6% |
| 3578307 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 52.0 | 5.66e-01 | 100.0% | 90.6% |
| 4595018 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.72 | 62.0 | 5.46e-01 | 100.0% | 64.7% |
| 4932579 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 64.0 | 6.04e-01 | 100.0% | 81.3% |
| 4041632 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.71 | 67.0 | 5.89e-01 | 100.0% | 74.5% |
| 3229352 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 50.0 | 5.76e-01 | 100.0% | 100.0% |
| 3239000 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 65.0 | 5.97e-01 | 100.0% | 77.7% |
| 4374423 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.71 | 63.0 | 5.77e-01 | 100.0% | 73.3% |
| 4458323 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.71 | 62.0 | 5.61e-01 | 100.0% | 71.1% |
| 4981994 | 2.1.1.83 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N | 0.71 | 45.0 | 5.01e-01 | 100.0% | 82.5% |
| 4473605 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.71 | 47.0 | 5.21e-01 | 91.3% | 85.5% |
| 3547167 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 65.0 | 5.47e-01 | 100.0% | 96.5% |
| 4980752 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.70 | 44.0 | 4.46e-01 | 100.0% | 62.9% |
| 4449302 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 59.0 | 5.90e-01 | 100.0% | 89.5% |
| 3287532 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 60.0 | 6.18e-01 | 99.0% | 97.0% |
| 3262463 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.70 | 64.0 | 5.73e-01 | 100.0% | 72.9% |
| 5000768 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.70 | 65.0 | 6.27e-01 | 100.0% | 94.8% |
| 4404198 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.70 | 48.0 | 5.50e-01 | 100.0% | 97.3% |
| 4207785 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.69 | 64.0 | 4.03e-01 | 100.0% | 20.8% |
| 4029733 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 63.0 | 6.06e-01 | 100.0% | 87.8% |
| 3610888 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 63.0 | 5.86e-01 | 100.0% | 79.2% |
| 3801700 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 64.0 | 4.55e-01 | 100.0% | 38.6% |
| 4029663 | 2.1.1.140 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SURF1 | 0.69 | 63.0 | 5.17e-01 | 100.0% | 87.6% |
| 3956143 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 56.0 | 6.05e-01 | 93.3% | 100.0% |
| 5017465 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.69 | 63.0 | 5.88e-01 | 100.0% | 85.9% |
| 4104013 | 2.1.1.88 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD2 | 0.69 | 43.0 | 4.62e-01 | 100.0% | 73.3% |
| 4580915 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.69 | 64.0 | 5.64e-01 | 100.0% | 71.7% |
| 5030410 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.69 | 58.0 | 6.03e-01 | 98.1% | 98.9% |
| 3798423 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 63.0 | 5.84e-01 | 100.0% | 88.5% |
| 4288521 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.68 | 63.0 | 5.52e-01 | 100.0% | 70.0% |
| 4084867 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.68 | 62.0 | 5.53e-01 | 100.0% | 71.0% |
| 3684440 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 45.0 | 5.05e-01 | 90.4% | 88.7% |
| 3720086 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 62.0 | 5.23e-01 | 100.0% | 70.0% |
| 3888826 | 2.1.1.255 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31100 | 0.68 | 62.0 | 5.50e-01 | 100.0% | 84.8% |
| 3854814 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.68 | 49.0 | 4.95e-01 | 91.3% | 75.2% |
| 3409288 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.67 | 62.0 | 6.15e-01 | 100.0% | 97.3% |
| 3719465 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.67 | 62.0 | 6.13e-01 | 100.0% | 98.2% |
| 4311381 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.67 | 62.0 | 5.53e-01 | 100.0% | 75.2% |
| 5030518 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.67 | 62.0 | 5.67e-01 | 100.0% | 96.2% |
| 4982481 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 56.0 | 5.90e-01 | 98.1% | 100.0% |
| 3488538 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 61.0 | 5.64e-01 | 100.0% | 80.8% |
| 3186247 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.66 | 43.0 | 4.01e-01 | 99.0% | 53.1% |
| 3594959 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.66 | 60.0 | 5.88e-01 | 100.0% | 91.8% |
| 3587188 | 2.1.1.33 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF961 | 0.66 | 52.0 | 5.25e-01 | 83.7% | 96.2% |
| 2716287 | 2.1.1.35 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rho_RNA_bind | 0.66 | 53.0 | 5.46e-01 | 94.2% | 90.8% |
| 4273244 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 48.0 | 5.36e-01 | 84.6% | 98.8% |
| 3626166 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 46.0 | 5.01e-01 | 89.4% | 88.2% |
| 3957735 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.65 | 45.0 | 4.96e-01 | 100.0% | 90.4% |
| 3610887 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 57.0 | 5.49e-01 | 94.2% | 86.1% |
| 3619973 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 46.0 | 5.11e-01 | 100.0% | 95.0% |
| 3211784 | 2.1.1.249 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_DEPS-1_2nd | 0.65 | 44.0 | 5.03e-01 | 100.0% | 97.3% |
| 3593282 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 54.0 | 5.69e-01 | 100.0% | 98.9% |
| 3700294 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 59.0 | 5.53e-01 | 100.0% | 84.0% |
| 3595472 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 47.0 | 4.28e-01 | 79.8% | 58.6% |
| 3963716 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 53.0 | 5.21e-01 | 89.4% | 90.0% |
| 4943144 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 48.0 | 5.13e-01 | 87.5% | 96.6% |
| 5011566 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 48.0 | 4.31e-01 | 82.7% | 66.9% |
| 3264096 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 57.0 | 5.41e-01 | 100.0% | 96.7% |
| 5024446 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.61 | 48.0 | 5.03e-01 | 89.4% | 96.7% |
| 5010568 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.61 | 47.0 | 4.93e-01 | 88.5% | 92.6% |
| 3701347 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 48.0 | 3.35e-01 | 86.5% | 75.9% |
| 4930381 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.60 | 48.0 | 5.08e-01 | 88.5% | 100.0% |
| 5008548 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 49.0 | 5.12e-01 | 90.4% | 98.9% |
| 3959123 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.59 | 48.0 | 4.87e-01 | 89.4% | 90.5% |
| 5051229 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.58 | 46.0 | 4.66e-01 | 90.4% | 86.7% |
| 3763621 | 221.1.1.42 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › GABP-alpha | 0.50 | 38.0 | 4.08e-01 | 83.7% | 92.2% |
D2
high
residues 252-361
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19804.6 best | DUF6287 | 67.2 | 2.00e-18 | 100.0% | 65.2% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.67 | 35.0 | 4.42e-01 | 81.8% | 87.3% |
| 6zhhA01 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.61 | 50.0 | 4.29e-01 | 89.1% | 98.9% |
| 2pmlX01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 43.0 | 4.13e-01 | 74.5% | 90.3% |
| 6xmtA02 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.58 | 51.0 | 4.45e-01 | 97.3% | 78.0% |
| 3fyfA00 | 2.40.128.410 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 50.0 | 4.56e-01 | 100.0% | 77.9% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 44.0 | 4.39e-01 | 89.1% | 91.1% |
| 1nqnA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.53 | 47.0 | 4.66e-01 | 97.3% | 97.5% |
| 6j5tB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 37.0 | 3.67e-01 | 76.4% | 99.2% |
| 4bboA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.51 | 43.0 | 4.31e-01 | 93.6% | 98.2% |
| 3bdrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 45.0 | 4.04e-01 | 100.0% | 96.8% |
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 32.0 | 3.61e-01 | 83.6% | 85.4% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4256361 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.62 | 44.0 | 3.47e-01 | 72.7% | 82.6% |
| 3399365 | 9.2.1.10 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7044 | 0.61 | 54.0 | 5.46e-01 | 98.2% | 94.5% |
| 5037276 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.61 | 51.0 | 4.19e-01 | 90.0% | 95.5% |
| 2768748 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.61 | 50.0 | 3.66e-01 | 89.1% | 58.7% |
| 166770 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 43.0 | 3.07e-01 | 78.2% | 55.8% |
| 3837926 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.57 | 48.0 | 4.70e-01 | 90.9% | 94.2% |
| 3174930 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.57 | 47.0 | 4.45e-01 | 97.3% | 75.4% |
| 3220701 | 206.1.1.55 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL | 0.56 | 42.0 | 2.89e-01 | 77.3% | 29.3% |
| 3284788 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.56 | 33.0 | 3.78e-01 | 100.0% | 80.0% |
| 3731233 | 220.1.1.202 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FT_N | 0.55 | 40.0 | 3.64e-01 | 81.8% | 56.0% |
| 3605927 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.53 | 38.0 | 3.76e-01 | 74.5% | 81.7% |
| 3247905 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.52 | 46.0 | 3.65e-01 | 98.2% | 95.1% |
| 4609120 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.51 | 34.0 | 3.75e-01 | 83.6% | 83.3% |
D3
medium
residues 4-76
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4oonA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.82 | 59.0 | 5.21e-01 | 75.3% | 77.9% |
| 1bkbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.82 | 60.0 | 6.33e-01 | 76.7% | 93.8% |
| 3udfA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.79 | 57.0 | 5.20e-01 | 75.3% | 86.3% |
| 3oyyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 56.0 | 5.90e-01 | 75.3% | 93.8% |
| 3j7yD02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 40.0 | 3.85e-01 | 78.1% | 44.4% |
| 2awnC02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.78 | 56.0 | 5.51e-01 | 75.3% | 75.6% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 40.0 | 4.76e-01 | 76.7% | 74.0% |
| 2rcnA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.77 | 56.0 | 6.04e-01 | 75.3% | 91.8% |
| 2je6I02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 55.0 | 5.17e-01 | 75.3% | 87.5% |
| 3d0fA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 54.0 | 5.43e-01 | 74.0% | 94.5% |
| 3bzcA05 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 53.0 | 4.81e-01 | 72.6% | 84.4% |
| 2rhsD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 55.0 | 4.86e-01 | 79.5% | 80.6% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 38.0 | 3.97e-01 | 76.7% | 54.4% |
| 3nswA00 | 2.40.50.780 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.73 | 53.0 | 4.73e-01 | 78.1% | 66.0% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 37.0 | 3.79e-01 | 76.7% | 50.7% |
| 2k52A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 50.0 | 4.99e-01 | 72.6% | 86.5% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 41.0 | 4.89e-01 | 74.0% | 88.0% |
| 3zjyC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 50.0 | 5.07e-01 | 78.1% | 82.4% |
| 4gnxA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 51.0 | 4.44e-01 | 78.1% | 58.3% |
| 2rf4E02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 47.0 | 4.50e-01 | 71.2% | 97.6% |
| 3bdlA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 47.0 | 3.63e-01 | 75.3% | 63.3% |
| 2a6hC05 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 45.0 | 4.49e-01 | 72.6% | 74.7% |
| 1kl9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 44.0 | 4.41e-01 | 72.6% | 76.0% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 36.0 | 3.93e-01 | 79.5% | 69.4% |
| 4ckbA01 | 3.30.470.140 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › | 0.60 | 50.0 | 3.80e-01 | 91.8% | 66.9% |
| 1s1nA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 35.0 | 3.80e-01 | 75.3% | 70.0% |
| 2khjA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 40.0 | 3.85e-01 | 71.2% | 76.4% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 42.0 | 4.16e-01 | 79.5% | 100.0% |
| 6t5kC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.55 | 38.0 | 2.72e-01 | 72.6% | 93.3% |
| 6u7jA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 38.0 | 3.56e-01 | 74.0% | 92.1% |
| 1y13A00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.53 | 37.0 | 2.83e-01 | 72.6% | 59.5% |
| 3ulbA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 37.0 | 3.64e-01 | 75.3% | 74.7% |
| 6bjqA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.57e-01 | 75.3% | 92.0% |
| 5k19A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 40.0 | 2.62e-01 | 87.7% | 72.1% |
| 1ajoA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 35.0 | 2.61e-01 | 71.2% | 91.0% |
| 1s2kA00 | 2.60.120.700 | Mainly Beta › Sandwich › Jelly Rolls › Peptidase G1 | 0.52 | 37.0 | 2.76e-01 | 76.7% | 41.7% |
| 1b3qA04 | 2.40.50.180 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 | 0.52 | 36.0 | 3.79e-01 | 74.0% | 98.4% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4113537 | 2.1.1.327 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF27401 | 0.83 | 57.0 | 5.99e-01 | 71.2% | 92.3% |
| 3603358 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.82 | 60.0 | 6.63e-01 | 76.7% | 93.3% |
| 5077487 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.82 | 61.0 | 4.81e-01 | 78.1% | 91.4% |
| 5005814 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 53.0 | 6.20e-01 | 71.2% | 98.0% |
| 4958385 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.80 | 42.0 | 5.65e-01 | 76.7% | 97.5% |
| 4259370 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 55.0 | 6.19e-01 | 71.2% | 96.4% |
| 4984320 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.79 | 57.0 | 4.64e-01 | 75.3% | 93.1% |
| 4950307 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 56.0 | 5.47e-01 | 74.0% | 83.7% |
| 4937684 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 55.0 | 6.02e-01 | 72.6% | 90.0% |
| 4997768 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 54.0 | 6.19e-01 | 72.6% | 96.4% |
| 5026951 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.77 | 56.0 | 4.66e-01 | 76.7% | 90.4% |
| 4678094 | 2.1.1.101 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › KfrB | 0.77 | 56.0 | 4.73e-01 | 78.1% | 46.7% |
| 4100241 | 2.1.1.113 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CvfB_2nd | 0.77 | 53.0 | 5.03e-01 | 71.2% | 68.2% |
| 3973363 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 53.0 | 5.27e-01 | 71.2% | 77.3% |
| 5080202 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.77 | 56.0 | 4.63e-01 | 76.7% | 94.4% |
| 4536756 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.77 | 53.0 | 5.02e-01 | 71.2% | 77.6% |
| 4353586 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 58.0 | 5.15e-01 | 79.5% | 63.0% |
| 5030021 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 53.0 | 5.47e-01 | 72.6% | 85.7% |
| 4964062 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.76 | 54.0 | 5.02e-01 | 74.0% | 84.4% |
| 4103327 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.76 | 54.0 | 4.48e-01 | 74.0% | 96.7% |
| 4966535 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 54.0 | 5.92e-01 | 75.3% | 91.7% |
| 5004633 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 54.0 | 5.05e-01 | 75.3% | 85.6% |
| 4977723 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.75 | 55.0 | 4.43e-01 | 76.7% | 88.1% |
| 5047864 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.75 | 54.0 | 4.54e-01 | 75.3% | 96.7% |
| 4977479 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.75 | 52.0 | 3.38e-01 | 72.6% | 59.7% |
| 4583050 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 57.0 | 5.83e-01 | 79.5% | 85.7% |
| 4114715 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 57.0 | 5.03e-01 | 80.8% | 62.9% |
| 5032554 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.75 | 55.0 | 4.52e-01 | 76.7% | 94.4% |
| 3624905 | 2.1.1.253 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29478 | 0.75 | 52.0 | 5.35e-01 | 71.2% | 88.4% |
| 3387984 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.75 | 51.0 | 4.89e-01 | 71.2% | 72.9% |
| 2759388 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 56.0 | 5.71e-01 | 79.5% | 91.5% |
| 3973356 | 2.1.1.63 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_2 | 0.74 | 51.0 | 5.23e-01 | 71.2% | 92.9% |
| 1881367 | 2.1.1.70 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C | 0.74 | 54.0 | 5.75e-01 | 76.7% | 93.5% |
| 4451633 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.74 | 55.0 | 4.48e-01 | 78.1% | 96.9% |
| 3274510 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.74 | 54.0 | 5.37e-01 | 76.7% | 86.7% |
| 4380179 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.74 | 55.0 | 5.01e-01 | 78.1% | 87.4% |
| 3602009 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 52.0 | 4.27e-01 | 74.0% | 43.1% |
| 365199 | 2.1.1.70 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C | 0.74 | 53.0 | 5.29e-01 | 76.7% | 75.3% |
| 5010892 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.73 | 52.0 | 4.60e-01 | 74.0% | 68.6% |
| 4950866 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.73 | 52.0 | 4.90e-01 | 75.3% | 85.6% |
| 4998126 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.73 | 52.0 | 4.98e-01 | 75.3% | 87.1% |
| 4236717 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.72 | 51.0 | 4.29e-01 | 74.0% | 98.3% |
| 5044484 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.71 | 49.0 | 4.58e-01 | 72.6% | 77.4% |
| 4833642 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.71 | 36.0 | 4.47e-01 | 78.1% | 77.8% |
| 4889459 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 60.0 | 5.50e-01 | 93.2% | 73.4% |
| 4882420 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.71 | 37.0 | 4.34e-01 | 82.2% | 72.5% |
| 4952526 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.70 | 50.0 | 4.71e-01 | 75.3% | 84.4% |
| 3938105 | 2.1.1.253 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29478 | 0.69 | 49.0 | 4.99e-01 | 74.0% | 87.1% |
| 4553088 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 47.0 | 4.98e-01 | 71.2% | 86.2% |
| 4948212 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 49.0 | 4.86e-01 | 74.0% | 90.7% |
| 5002450 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 46.0 | 5.13e-01 | 71.2% | 94.5% |
| 5026606 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 48.0 | 4.95e-01 | 75.3% | 92.9% |
| 4653384 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.67 | 46.0 | 4.99e-01 | 71.2% | 95.0% |
| 4991825 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 46.0 | 4.51e-01 | 72.6% | 68.8% |
| 4970996 | 2.1.1.21 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Methyltrn_RNA_3 | 0.66 | 47.0 | 4.58e-01 | 75.3% | 90.0% |
| 4048586 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.66 | 48.0 | 4.89e-01 | 76.7% | 82.9% |
| 4098530 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.65 | 45.0 | 3.18e-01 | 71.2% | 26.3% |
| 4353811 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.65 | 45.0 | 4.61e-01 | 71.2% | 77.1% |
| 4946885 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.58 | 41.0 | 3.85e-01 | 75.3% | 93.3% |
| 5030555 | 3433.1.1.0 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Plasmid-encoded ParB dimerization domain | 0.53 | 25.0 | 3.09e-01 | 75.3% | 65.0% |
| 3901822 | 5.1.5.50 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › MIOS_WD40 | 0.51 | 41.0 | 2.68e-01 | 93.2% | 80.5% |
| 3260669 | 5.1.4.155 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MIOS_WD40 | 0.51 | 43.0 | 2.73e-01 | 100.0% | 79.8% |
| 5010257 | 298.1.1.2 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Homoserine_dh | 0.51 | 40.0 | 3.16e-01 | 94.5% | 91.4% |