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MK448420.1__QBX09011.1__JavanS309_0001__00018
Bact-VirMK448420.1__QBX09011.1__JavanS309_0001__00018
Identity
- Accession:
- MK448420 ↗
- Kingdom:
- phage
Quality
97.1
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-130
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06824.18 best | Glyco_hydro_125 | 111.8 | 5.40e-32 | 83.9% | 28.5% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p0vA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.94 | 86.0 | 5.74e-01 | 98.5% | 28.9% |
| 1nc5A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.70 | 57.0 | 4.05e-01 | 86.2% | 38.3% |
| 3k7xA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.64 | 49.0 | 3.60e-01 | 89.2% | 30.3% |
| 4c1sA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.62 | 50.0 | 3.61e-01 | 86.9% | 42.4% |
| 4qgpB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.55 | 23.0 | 2.56e-01 | 79.2% | 45.8% |
| 3qsgA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.54 | 38.0 | 3.99e-01 | 71.5% | 96.5% |
| 3x3bA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 37.0 | 2.95e-01 | 74.6% | 44.6% |
| 1ka1A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.51 | 36.0 | 3.03e-01 | 71.5% | 46.1% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 142594 | 109.2.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_125 | 0.99 | 98.0 | 6.43e-01 | 100.0% | 30.5% |
| 141140 | 109.2.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_125 | 0.91 | 88.0 | 5.81e-01 | 100.0% | 29.7% |
| 4505 | 109.2.1.23 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_88 | 0.70 | 57.0 | 4.05e-01 | 86.2% | 38.3% |
| 2032530 | 109.2.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_8 | 0.64 | 54.0 | 3.84e-01 | 92.3% | 30.7% |
D2
medium
residues 131-152_220-250
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6d5xA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.70 | 60.0 | 4.31e-01 | 96.2% | 67.5% |
| 2c5iT00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 56.0 | 4.68e-01 | 94.3% | 91.5% |
| 2yinA03 | 1.20.58.740 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C | 0.66 | 56.0 | 4.34e-01 | 100.0% | 82.8% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.64 | 54.0 | 4.56e-01 | 98.1% | 90.3% |
| 2fb5A01 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.63 | 44.0 | 3.99e-01 | 98.1% | 54.2% |
| 2yfqB01 | 1.10.8.1210 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 46.0 | 4.65e-01 | 92.5% | 78.8% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 45.0 | 3.95e-01 | 77.4% | 72.4% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.61 | 52.0 | 4.46e-01 | 96.2% | 88.5% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.61 | 45.0 | 3.79e-01 | 77.4% | 74.1% |
| 1ylmA00 | 1.20.120.580 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like | 0.60 | 49.0 | 3.72e-01 | 96.2% | 69.7% |
| 2odmA00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.60 | 48.0 | 4.29e-01 | 90.6% | 87.3% |
| 1t6cA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 53.0 | 4.01e-01 | 100.0% | 51.2% |
| 2kw6A00 | 6.10.140.1300 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 45.0 | 4.18e-01 | 83.0% | 64.6% |
| 4jykA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 52.0 | 3.83e-01 | 100.0% | 97.2% |
| 2mpnA00 | 6.10.140.1340 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 42.0 | 3.88e-01 | 98.1% | 60.3% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 50.0 | 4.40e-01 | 98.1% | 100.0% |
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.58 | 40.0 | 3.78e-01 | 75.5% | 86.6% |
| 2i7uA00 | 6.10.250.1010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.57 | 41.0 | 3.96e-01 | 77.4% | 79.0% |
| 1cf7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 47.0 | 4.09e-01 | 92.5% | 97.6% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 44.0 | 4.12e-01 | 92.5% | 95.9% |
| 8fnyA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 46.0 | 3.10e-01 | 90.6% | 29.6% |
| 1b06A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.56 | 42.0 | 3.90e-01 | 81.1% | 74.6% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 44.0 | 3.94e-01 | 88.7% | 92.1% |
| 1rfyB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.55 | 47.0 | 3.97e-01 | 94.3% | 64.8% |
| 1vx7301 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 45.0 | 4.01e-01 | 90.6% | 89.2% |
| 2v0xA01 | 1.10.287.3160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 45.0 | 3.16e-01 | 92.5% | 73.2% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.53 | 38.0 | 3.17e-01 | 77.4% | 48.9% |
| 2rreA00 | 1.10.10.2010 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 39.0 | 3.50e-01 | 83.0% | 83.8% |
| 1ykhA00 | 6.10.140.200 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 45.0 | 3.67e-01 | 96.2% | 83.2% |
| 3pyoY00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 39.0 | 3.76e-01 | 96.2% | 72.6% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3496653 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.65 | 54.0 | 4.44e-01 | 96.2% | 96.2% |
| 3530379 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.64 | 49.0 | 3.85e-01 | 84.9% | 86.1% |
| 3621403 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.63 | 55.0 | 3.99e-01 | 100.0% | 56.7% |
| 4508314 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.62 | 43.0 | 4.10e-01 | 100.0% | 61.9% |
| 4943086 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.60 | 45.0 | 4.12e-01 | 81.1% | 61.4% |
| 4596420 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.59 | 43.0 | 3.42e-01 | 92.5% | 39.0% |
| 3932885 | 109.4.1.759 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dymeclin | 0.59 | 49.0 | 3.05e-01 | 100.0% | 35.1% |
| 4961031 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.59 | 44.0 | 4.03e-01 | 79.2% | 71.4% |
| 4110261 | 3748.1.1.2 ↗ | extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › CSN5_C | 0.58 | 42.0 | 3.58e-01 | 75.5% | 91.8% |
| 3595968 | 605.2.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 | 0.57 | 44.0 | 3.81e-01 | 92.5% | 55.0% |
| 3385950 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.57 | 42.0 | 3.85e-01 | 79.2% | 81.4% |
| 3974483 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.57 | 46.0 | 3.47e-01 | 94.3% | 95.7% |
| 3203800 | 605.1.1.250 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › PF25886 | 0.56 | 41.0 | 3.62e-01 | 77.4% | 68.0% |
| 3614525 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.56 | 44.0 | 3.49e-01 | 94.3% | 41.8% |
| 3973303 | 1049.2.1.3 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › PF26776 | 0.56 | 45.0 | 3.48e-01 | 88.7% | 44.3% |
| 3388607 | 603.1.1.105 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021 | 0.55 | 43.0 | 3.67e-01 | 92.5% | 94.0% |
| 3929028 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.55 | 47.0 | 2.80e-01 | 92.5% | 16.9% |
| 3394093 | 5038.2.1.1 ↗ | alpha superhelices › Cytochrome c oxidase subunit I-like › MAPEG domain-like › MAPEG domain-like › MAPEG | 0.54 | 46.0 | 3.26e-01 | 94.3% | 40.0% |
| 3386452 | 5050.1.1.21 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › FTR1 | 0.53 | 48.0 | 3.47e-01 | 100.0% | 91.7% |
| 4964836 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.53 | 47.0 | 3.28e-01 | 100.0% | 85.3% |
| 4346136 | 605.1.1.108 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › GrpE | 0.53 | 43.0 | 4.01e-01 | 88.7% | 72.3% |
| 3564496 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 41.0 | 2.91e-01 | 84.9% | 30.0% |
| 3592140 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.51 | 44.0 | 3.36e-01 | 100.0% | 79.3% |
| 4964814 | 2007.1.3.72 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › HalX | 0.51 | 44.0 | 3.05e-01 | 96.2% | 66.9% |
D3
medium
residues 153-219_251-335
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06824.18 best | Glyco_hydro_125 | 107.5 | 1.10e-30 | 55.9% | 19.6% |
| PF06824.18 | Glyco_hydro_125 | 53.5 | 2.70e-14 | 47.4% | 18.6% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p0vA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.97 | 95.0 | 6.48e-01 | 100.0% | 42.7% |
| 4wu0A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.57 | 53.0 | 3.99e-01 | 100.0% | 54.7% |
| 1dl2A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.57 | 53.0 | 3.63e-01 | 100.0% | 39.0% |
| 1nxcA00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.57 | 51.0 | 3.66e-01 | 100.0% | 62.1% |
| 1nc5A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.55 | 50.0 | 3.79e-01 | 100.0% | 65.6% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 142594 | 109.2.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_125 | 1.00 | 99.0 | 6.74e-01 | 100.0% | 43.0% |
| 141140 | 109.2.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_125 | 0.97 | 95.0 | 6.42e-01 | 100.0% | 40.9% |
| 3733467 | 109.2.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_125 | 0.95 | 93.0 | 6.03e-01 | 100.0% | 37.2% |
| 4015684 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.95 | 93.0 | 6.11e-01 | 100.0% | 39.6% |
| 3184183 | 109.2.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_125 | 0.95 | 93.0 | 5.96e-01 | 100.0% | 41.2% |
| 4019772 | 109.2.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_125 | 0.95 | 93.0 | 6.01e-01 | 100.0% | 40.0% |
| 4977219 | 109.2.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_125 | 0.74 | 70.0 | 5.31e-01 | 100.0% | 46.8% |
| 4976383 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.73 | 70.0 | 5.03e-01 | 100.0% | 40.0% |
| 3258338 | 109.2.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_47 | 0.58 | 53.0 | 3.74e-01 | 100.0% | 37.2% |
| 3871054 | 109.2.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_47 | 0.57 | 52.0 | 3.64e-01 | 100.0% | 60.6% |
D4
medium
residues 336-426
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06824.18 best | Glyco_hydro_125 | 106.4 | 2.30e-30 | 93.4% | 20.5% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p0vA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.95 | 91.0 | 5.58e-01 | 98.9% | 21.2% |
| 4j5tA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.73 | 65.0 | 4.11e-01 | 100.0% | 48.7% |
| 4ayoA00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.73 | 66.0 | 4.21e-01 | 100.0% | 47.7% |
| 1nxcA00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.72 | 64.0 | 4.08e-01 | 100.0% | 32.8% |
| 5h41A01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.70 | 63.0 | 4.01e-01 | 98.9% | 59.0% |
| 1mhyG02 | 1.20.1280.30 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 | 0.65 | 44.0 | 4.83e-01 | 82.4% | 86.3% |
| 3nzpB03 | 1.20.58.930 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 46.0 | 4.85e-01 | 84.6% | 84.8% |
| 2jpnA00 | 1.20.1280.210 | Mainly Alpha › Up-down Bundle › Monooxygenase › Uncharacterised protein UvsW.1 | 0.61 | 40.0 | 4.25e-01 | 83.5% | 78.5% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.59 | 44.0 | 4.34e-01 | 84.6% | 73.7% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 45.0 | 4.58e-01 | 81.3% | 98.9% |
| 6wv5A01 | 1.20.1440.130 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › VKOR domain | 0.59 | 47.0 | 4.16e-01 | 86.8% | 94.1% |
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.59 | 44.0 | 4.26e-01 | 82.4% | 69.8% |
| 1ea9C02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 48.0 | 3.31e-01 | 93.4% | 29.8% |
| 3kfwX03 | 1.20.58.1460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 40.0 | 4.30e-01 | 82.4% | 88.2% |
| 5cwhA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.57 | 51.0 | 4.25e-01 | 98.9% | 64.1% |
| 2yv7A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 44.0 | 3.86e-01 | 84.6% | 81.2% |
| 2fuqA01 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.55 | 50.0 | 3.36e-01 | 100.0% | 52.4% |
| 5cwkA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 48.0 | 3.93e-01 | 98.9% | 56.5% |
| 1zeeA01 | 1.20.58.600 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 47.0 | 4.30e-01 | 96.7% | 96.6% |
| 3s1sA02 | 3.40.50.12420 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 41.0 | 2.73e-01 | 85.7% | 45.7% |
| 6vvoE02 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.51 | 39.0 | 3.84e-01 | 82.4% | 94.9% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 41.0 | 3.98e-01 | 89.0% | 80.4% |
| 2btdA00 | 1.25.40.340 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DhaL domain | 0.50 | 40.0 | 3.15e-01 | 89.0% | 45.5% |
| 1h97A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 42.0 | 3.67e-01 | 95.6% | 84.4% |
| 3hhwK01 | 1.10.3570.10 | Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like fold › Rhabdovirus nucleocapsid protein like domain | 0.50 | 43.0 | 3.51e-01 | 98.9% | 85.2% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 142594 | 109.2.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_125 | 1.00 | 98.0 | 5.99e-01 | 100.0% | 21.4% |
| 141140 | 109.2.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_125 | 0.95 | 91.0 | 5.54e-01 | 98.9% | 20.4% |
| 4015684 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.94 | 89.0 | 5.32e-01 | 98.9% | 17.7% |
| 4019772 | 109.2.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_125 | 0.93 | 88.0 | 5.24e-01 | 98.9% | 18.5% |
| 3184183 | 109.2.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_125 | 0.93 | 88.0 | 5.19e-01 | 98.9% | 18.2% |
| 3733467 | 109.2.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_125 | 0.92 | 88.0 | 5.22e-01 | 100.0% | 21.1% |
| 4989819 | 109.2.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_15 | 0.88 | 80.0 | 5.15e-01 | 97.8% | 27.1% |
| 5039964 | 109.2.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_15 | 0.86 | 81.0 | 5.16e-01 | 100.0% | 35.3% |
| 5019209 | 109.2.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_15 | 0.86 | 80.0 | 5.77e-01 | 100.0% | 45.1% |
| 4977090 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.85 | 78.0 | 5.12e-01 | 98.9% | 35.6% |
| 4976383 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.83 | 75.0 | 4.83e-01 | 100.0% | 23.4% |
| 5010708 | 109.2.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_15 | 0.83 | 77.0 | 4.92e-01 | 98.9% | 25.0% |
| 4977219 | 109.2.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_125 | 0.82 | 74.0 | 4.96e-01 | 97.8% | 27.7% |
| 5039994 | 109.2.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_15 | 0.82 | 76.0 | 4.84e-01 | 100.0% | 36.4% |
| 5026058 | 109.2.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_15 | 0.81 | 75.0 | 4.77e-01 | 98.9% | 24.0% |
| 4961937 | 109.2.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_15 | 0.80 | 72.0 | 4.65e-01 | 98.9% | 37.8% |
| 4012801 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.74 | 64.0 | 4.05e-01 | 96.7% | 46.6% |
| 3593043 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.74 | 64.0 | 3.70e-01 | 95.6% | 26.4% |
| 3206402 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.73 | 64.0 | 3.70e-01 | 96.7% | 27.7% |
| 5025975 | 109.2.1.18 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › GDE_C | 0.71 | 63.0 | 4.20e-01 | 97.8% | 36.7% |
| 3801295 | 109.2.1.10 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_63 | 0.71 | 63.0 | 3.99e-01 | 98.9% | 52.7% |
| None | — | 0.68 | 61.0 | 3.83e-01 | 98.9% | 77.2% | |
| 3596405 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 51.0 | 4.59e-01 | 98.9% | 68.0% |
| 3197862 | 109.4.1.298 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VPS15-like_hel | 0.55 | 49.0 | 3.77e-01 | 98.9% | 58.6% |
| 4121455 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 48.0 | 3.37e-01 | 98.9% | 53.5% |
| 3608296 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 48.0 | 4.62e-01 | 96.7% | 84.8% |
| 3388954 | 103.1.1.1 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA | 0.54 | 49.0 | 4.59e-01 | 98.9% | 92.7% |
| 3804338 | 109.4.1.1274 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long | 0.52 | 44.0 | 2.61e-01 | 93.4% | 14.1% |
| 3439872 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 45.0 | 3.55e-01 | 98.9% | 45.8% |
| 3449227 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.52 | 48.0 | 3.05e-01 | 100.0% | 29.0% |
| 3833972 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.51 | 44.0 | 3.65e-01 | 98.9% | 51.8% |
| 3695830 | 633.24.1.7 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › TMD_POM152 | 0.51 | 39.0 | 4.08e-01 | 85.7% | 98.8% |