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MK448429.1__QBX09172.1__JavanS323_0001__00018
Bact-VirMK448429.1__QBX09172.1__JavanS323_0001__00018
Identity
- Accession:
- MK448429 ↗
- Kingdom:
- phage
Quality
93.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-82
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k2tA01 | 3.30.505.50 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | 0.59 | 34.0 | 4.20e-01 | 76.2% | 100.0% |
| 2kc8A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.52 | 37.0 | 3.55e-01 | 86.3% | 63.2% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.51 | 43.0 | 2.95e-01 | 100.0% | 97.3% |
| 7x36A01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.51 | 41.0 | 2.80e-01 | 91.3% | 45.5% |
| 3oulA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 39.0 | 2.99e-01 | 90.0% | 82.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4970868 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.57 | 39.0 | 3.41e-01 | 72.5% | 70.4% |
| 4089210 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.56 | 35.0 | 3.51e-01 | 93.8% | 60.0% |
| 5070134 | 5.1.4.43 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 | 0.53 | 42.0 | 2.77e-01 | 88.7% | 34.4% |
| 4075142 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 31.0 | 2.70e-01 | 86.3% | 35.6% |
| 5040009 | 5.1.3.22 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › GSDH | 0.52 | 42.0 | 2.78e-01 | 88.7% | 39.1% |
| 3928388 | 633.33.1.1 ↗ | alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz | 0.51 | 36.0 | 2.74e-01 | 86.3% | 28.4% |
D2
high
residues 93-247
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 22.0 | 3.41e-01 | 97.4% | 69.4% |
| 2xklA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 30.0 | 3.12e-01 | 79.4% | 51.7% |
| 4l9cA00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.53 | 33.0 | 3.34e-01 | 91.0% | 62.0% |
| 1ohfA03 | 2.60.270.70 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.52 | 36.0 | 3.75e-01 | 100.0% | 76.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3622366 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.61 | 23.0 | 3.75e-01 | 97.4% | 100.0% |
| 3628233 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 26.0 | 3.58e-01 | 79.4% | 90.0% |
| 3664013 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.55 | 36.0 | 2.95e-01 | 93.5% | 34.9% |
| 3974189 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.54 | 28.0 | 3.12e-01 | 78.7% | 60.0% |
| 3495949 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 23.0 | 2.89e-01 | 73.5% | 64.4% |