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MK448444.1__QBX09468.1__JavanS343_0010__00010
Bact-VirMK448444.1__QBX09468.1__JavanS343_0010__00010
Identity
- Accession:
- MK448444 ↗
- Kingdom:
- phage
Quality
75.5
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-64
Domain cluster:
rep: MK448433.1__QBX09257.1__JavanS328_0013__00013__D1-48
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l01A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 48.0 | 4.31e-01 | 85.2% | 51.9% |
| 3zieD00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.66 | 49.0 | 4.36e-01 | 90.7% | 54.9% |
| 5hy7B02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 49.0 | 3.10e-01 | 90.7% | 33.4% |
| 3r5gA00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.62 | 50.0 | 3.49e-01 | 94.4% | 53.3% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 36.0 | 2.66e-01 | 100.0% | 23.9% |
| 3tghA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.52 | 38.0 | 2.48e-01 | 85.2% | 43.5% |
| 3bs1A00 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.51 | 39.0 | 3.25e-01 | 87.0% | 86.4% |
| 4mcxF00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.50 | 36.0 | 3.11e-01 | 79.6% | 69.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5062113 | 328.9.1.1 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF | 0.63 | 47.0 | 4.16e-01 | 88.9% | 54.2% |
| 4625844 | 101.1.2.20 ↗ | alpha arrays › HTH › HTH › winged helix domain › Arg_repressor | 0.61 | 37.0 | 3.47e-01 | 94.4% | 47.1% |
| None | — | 0.60 | 48.0 | 2.83e-01 | 94.4% | 18.9% | |
| 5018900 | 101.1.2.673 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N | 0.60 | 44.0 | 3.58e-01 | 96.3% | 41.0% |
| 5040361 | 101.1.2.673 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N | 0.58 | 42.0 | 3.44e-01 | 94.4% | 40.0% |
| 5035181 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.52 | 36.0 | 3.12e-01 | 74.1% | 71.1% |
| 4375816 | 314.1.1.12 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat | 0.51 | 41.0 | 2.76e-01 | 94.4% | 81.3% |